EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019013 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: zgc:153215
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 1858 bases
Position: chr1:19986579-19988436
Accession: ZDB-GENE-061103-58
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000031022	RRM_1	PF00076.22	8.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000031400	-	1494	-	ENSSMAP00000031022	497 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000019013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019013	zgc:153215	96	30.739	ENSSMAG00000019708	rbm12b	74	30.739

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019013	zgc:153215	97	31.361	ENSAPOG00000013963	rbm12b	74	31.361	Acanthochromis_polyacanthus
ENSSMAG00000019013	zgc:153215	94	52.361	ENSAPOG00000008836	zgc:153215	95	52.361	Acanthochromis_polyacanthus
ENSSMAG00000019013	zgc:153215	86	37.759	ENSACIG00000014943	rbm12b	97	37.759	Amphilophus_citrinellus
ENSSMAG00000019013	zgc:153215	96	53.267	ENSACIG00000013317	zgc:153215	99	53.267	Amphilophus_citrinellus
ENSSMAG00000019013	zgc:153215	97	32.277	ENSAOCG00000024270	rbm12b	74	32.213	Amphiprion_ocellaris
ENSSMAG00000019013	zgc:153215	97	52.390	ENSAOCG00000010819	zgc:153215	100	52.191	Amphiprion_ocellaris
ENSSMAG00000019013	zgc:153215	97	38.326	ENSAPEG00000022079	rbm12b	99	33.134	Amphiprion_percula
ENSSMAG00000019013	zgc:153215	93	75.610	ENSATEG00000001886	zgc:153215	87	64.762	Anabas_testudineus
ENSSMAG00000019013	zgc:153215	97	31.953	ENSATEG00000004578	rbm12b	74	32.150	Anabas_testudineus
ENSSMAG00000019013	zgc:153215	96	30.876	ENSACLG00000005575	rbm12b	72	30.876	Astatotilapia_calliptera
ENSSMAG00000019013	zgc:153215	80	53.571	ENSACLG00000005578	rbm12b	57	53.571	Astatotilapia_calliptera
ENSSMAG00000019013	zgc:153215	97	54.913	ENSACLG00000007675	zgc:153215	100	54.913	Astatotilapia_calliptera
ENSSMAG00000019013	zgc:153215	87	57.143	ENSAMXG00000020853	zgc:153215	70	57.143	Astyanax_mexicanus
ENSSMAG00000019013	zgc:153215	96	30.000	ENSAMXG00000041973	rbm12b	74	30.957	Astyanax_mexicanus
ENSSMAG00000019013	zgc:153215	96	31.000	ENSCSEG00000004610	rbm12b	69	31.000	Cynoglossus_semilaevis
ENSSMAG00000019013	zgc:153215	74	54.054	ENSCSEG00000001575	-	99	54.054	Cynoglossus_semilaevis
ENSSMAG00000019013	zgc:153215	96	52.657	ENSCVAG00000009259	-	99	52.657	Cyprinodon_variegatus
ENSSMAG00000019013	zgc:153215	93	56.818	ENSDARG00000055889	zgc:153215	99	35.714	Danio_rerio
ENSSMAG00000019013	zgc:153215	96	30.739	ENSETEG00000013005	-	65	30.739	Echinops_telfairi
ENSSMAG00000019013	zgc:153215	97	41.343	ENSELUG00000009039	zgc:153215	97	41.343	Esox_lucius
ENSSMAG00000019013	zgc:153215	97	31.138	ENSFHEG00000016425	rbm12b	74	30.924	Fundulus_heteroclitus
ENSSMAG00000019013	zgc:153215	95	56.906	ENSFHEG00000014539	zgc:153215	96	56.906	Fundulus_heteroclitus
ENSSMAG00000019013	zgc:153215	96	32.406	ENSGMOG00000013467	rbm12b	74	32.406	Gadus_morhua
ENSSMAG00000019013	zgc:153215	96	46.667	ENSGAFG00000007845	zgc:153215	99	46.667	Gambusia_affinis
ENSSMAG00000019013	zgc:153215	96	30.723	ENSGACG00000008682	rbm12b	72	30.723	Gasterosteus_aculeatus
ENSSMAG00000019013	zgc:153215	94	64.835	ENSHBUG00000016150	zgc:153215	86	64.835	Haplochromis_burtoni
ENSSMAG00000019013	zgc:153215	96	30.938	ENSHBUG00000016227	rbm12b	72	30.938	Haplochromis_burtoni
ENSSMAG00000019013	zgc:153215	96	30.040	ENSIPUG00000001167	RBM12B	71	30.040	Ictalurus_punctatus
ENSSMAG00000019013	zgc:153215	96	36.347	ENSIPUG00000019731	zgc:153215	99	36.347	Ictalurus_punctatus
ENSSMAG00000019013	zgc:153215	97	30.101	ENSKMAG00000013715	rbm12b	74	30.350	Kryptolebias_marmoratus
ENSSMAG00000019013	zgc:153215	97	30.680	ENSKMAG00000013704	rbm12b	72	30.680	Kryptolebias_marmoratus
ENSSMAG00000019013	zgc:153215	97	50.000	ENSKMAG00000004958	zgc:153215	99	50.000	Kryptolebias_marmoratus
ENSSMAG00000019013	zgc:153215	98	58.648	ENSLBEG00000002597	zgc:153215	100	58.449	Labrus_bergylta
ENSSMAG00000019013	zgc:153215	96	31.496	ENSLOCG00000018344	rbm12b	74	31.496	Lepisosteus_oculatus
ENSSMAG00000019013	zgc:153215	96	30.000	ENSLAFG00000029949	RBM12B	57	30.000	Loxodonta_africana
ENSSMAG00000019013	zgc:153215	97	71.111	ENSMAMG00000012038	zgc:153215	88	71.111	Mastacembelus_armatus
ENSSMAG00000019013	zgc:153215	96	32.600	ENSMAMG00000011998	rbm12b	74	32.600	Mastacembelus_armatus
ENSSMAG00000019013	zgc:153215	94	64.835	ENSMZEG00005005435	zgc:153215	86	64.835	Maylandia_zebra
ENSSMAG00000019013	zgc:153215	96	30.785	ENSMZEG00005015005	rbm12b	74	30.785	Maylandia_zebra
ENSSMAG00000019013	zgc:153215	97	52.252	ENSMMOG00000003372	zgc:153215	100	43.041	Mola_mola
ENSSMAG00000019013	zgc:153215	97	59.470	ENSMALG00000001222	zgc:153215	99	59.470	Monopterus_albus
ENSSMAG00000019013	zgc:153215	97	31.349	ENSMALG00000012059	rbm12b	73	31.349	Monopterus_albus
ENSSMAG00000019013	zgc:153215	94	65.934	ENSNBRG00000013644	zgc:153215	86	65.934	Neolamprologus_brichardi
ENSSMAG00000019013	zgc:153215	96	31.138	ENSNBRG00000015057	rbm12b	74	31.138	Neolamprologus_brichardi
ENSSMAG00000019013	zgc:153215	97	31.412	ENSONIG00000020612	rbm12b	74	31.412	Oreochromis_niloticus
ENSSMAG00000019013	zgc:153215	97	54.080	ENSONIG00000006054	zgc:153215	100	54.080	Oreochromis_niloticus
ENSSMAG00000019013	zgc:153215	97	30.392	ENSORLG00000008228	rbm12b	72	30.196	Oryzias_latipes
ENSSMAG00000019013	zgc:153215	97	30.392	ENSORLG00020013619	rbm12b	72	30.392	Oryzias_latipes_hni
ENSSMAG00000019013	zgc:153215	97	30.588	ENSORLG00015019999	rbm12b	72	30.392	Oryzias_latipes_hsok
ENSSMAG00000019013	zgc:153215	97	30.924	ENSOMEG00000022523	rbm12b	72	30.924	Oryzias_melastigma
ENSSMAG00000019013	zgc:153215	98	48.566	ENSOMEG00000004220	zgc:153215	98	49.180	Oryzias_melastigma
ENSSMAG00000019013	zgc:153215	96	32.806	ENSPKIG00000018719	rbm12b	73	32.806	Paramormyrops_kingsleyae
ENSSMAG00000019013	zgc:153215	96	36.647	ENSPKIG00000014851	zgc:153215	99	36.647	Paramormyrops_kingsleyae
ENSSMAG00000019013	zgc:153215	65	32.353	ENSPMGG00000012348	-	94	32.647	Periophthalmus_magnuspinnatus
ENSSMAG00000019013	zgc:153215	92	61.538	ENSPFOG00000017451	zgc:153215	71	61.538	Poecilia_formosa
ENSSMAG00000019013	zgc:153215	97	47.718	ENSPLAG00000000232	zgc:153215	100	47.718	Poecilia_latipinna
ENSSMAG00000019013	zgc:153215	97	48.133	ENSPMEG00000016662	zgc:153215	100	48.133	Poecilia_mexicana
ENSSMAG00000019013	zgc:153215	97	47.937	ENSPREG00000018608	zgc:153215	100	47.937	Poecilia_reticulata
ENSSMAG00000019013	zgc:153215	96	50.731	ENSPNYG00000018125	zgc:153215	97	50.731	Pundamilia_nyererei
ENSSMAG00000019013	zgc:153215	96	31.138	ENSPNYG00000016696	rbm12b	74	31.138	Pundamilia_nyererei
ENSSMAG00000019013	zgc:153215	88	54.945	ENSPNAG00000025628	zgc:153215	78	54.945	Pygocentrus_nattereri
ENSSMAG00000019013	zgc:153215	96	31.287	ENSPNAG00000008126	rbm12b	72	31.621	Pygocentrus_nattereri
ENSSMAG00000019013	zgc:153215	96	31.384	ENSSFOG00015001584	rbm12b	73	31.384	Scleropages_formosus
ENSSMAG00000019013	zgc:153215	96	39.335	ENSSFOG00015009427	zgc:153215	99	39.335	Scleropages_formosus
ENSSMAG00000019013	zgc:153215	96	31.335	ENSSDUG00000006856	rbm12b	74	31.335	Seriola_dumerili
ENSSMAG00000019013	zgc:153215	98	63.074	ENSSDUG00000012545	zgc:153215	100	63.710	Seriola_dumerili
ENSSMAG00000019013	zgc:153215	96	30.948	ENSSLDG00000016156	rbm12b	74	30.948	Seriola_lalandi_dorsalis
ENSSMAG00000019013	zgc:153215	98	77.778	ENSSLDG00000013581	zgc:153215	96	67.308	Seriola_lalandi_dorsalis
ENSSMAG00000019013	zgc:153215	98	30.799	ENSSPAG00000006774	rbm12b	75	30.799	Stegastes_partitus
ENSSMAG00000019013	zgc:153215	98	48.682	ENSSPAG00000023584	zgc:153215	99	48.884	Stegastes_partitus
ENSSMAG00000019013	zgc:153215	96	30.502	ENSTGUG00000011860	RBM12B	95	30.502	Taeniopygia_guttata
ENSSMAG00000019013	zgc:153215	96	30.785	ENSTRUG00000013738	rbm12b	74	30.785	Takifugu_rubripes
ENSSMAG00000019013	zgc:153215	75	49.373	ENSTNIG00000018374	-	99	49.373	Tetraodon_nigroviridis
ENSSMAG00000019013	zgc:153215	98	31.174	ENSXETG00000014696	rbm12b	69	31.174	Xenopus_tropicalis
ENSSMAG00000019013	zgc:153215	87	30.061	ENSXCOG00000019735	-	99	31.325	Xiphophorus_couchianus
ENSSMAG00000019013	zgc:153215	97	47.117	ENSXCOG00000019654	zgc:153215	99	47.117	Xiphophorus_couchianus
ENSSMAG00000019013	zgc:153215	82	53.659	ENSXMAG00000013169	-	95	53.659	Xiphophorus_maculatus
ENSSMAG00000019013	zgc:153215	98	30.375	ENSXMAG00000014213	rbm12b	75	31.189	Xiphophorus_maculatus