EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000019207 (Gene tree)
Gene ID
-
Gene Symbol
scrt1b
Alias
zgc:113646
Full Name
scratch family zinc finger 1b
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
9368 bases
Position
chr1:20261612-20270979
Accession
ZDB-GENE-050327-72
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000031317zf-C2H2PF00096.261e-2514
ENSSMAP00000031317zf-C2H2PF00096.261e-2524
ENSSMAP00000031317zf-C2H2PF00096.261e-2534
ENSSMAP00000031317zf-C2H2PF00096.261e-2544
ENSSMAP00000031317zf-metPF12874.76e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000031704-5114-ENSSMAP00000031317280 (aa)-A0A2U9AY88
Gene Model
Click here to download ENSSMAG00000019207's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019207's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000019207scrt1b7438.235ENSSMAG00000018844prdm58238.235
ENSSMAG00000019207scrt1b5136.937ENSSMAG00000017045-5336.937
ENSSMAG00000019207scrt1b5047.436ENSSMAG00000015849znf319b5747.436
ENSSMAG00000019207scrt1b5238.017ENSSMAG00000006825-9138.017
ENSSMAG00000019207scrt1b6437.719ENSSMAG00000009609-9140.789
ENSSMAG00000019207scrt1b5737.762ENSSMAG00000007396-7737.762
ENSSMAG00000019207scrt1b5637.121ENSSMAG00000015347-7937.121
ENSSMAG00000019207scrt1b8744.706ENSSMAG00000006197-9837.415
ENSSMAG00000019207scrt1b7134.641ENSSMAG00000019980-7034.641
ENSSMAG00000019207scrt1b5546.753ENSSMAG00000013663-9046.753
ENSSMAG00000019207scrt1b9537.736ENSSMAG00000002798-9937.736
ENSSMAG00000019207scrt1b5638.235ENSSMAG00000015282-7438.235
ENSSMAG00000019207scrt1b5243.373ENSSMAG00000021251-9243.373
ENSSMAG00000019207scrt1b5537.762ENSSMAG00000009115-8742.308
ENSSMAG00000019207scrt1b5133.793ENSSMAG00000015041si:dkey-7i4.58833.793
ENSSMAG00000019207scrt1b6131.868ENSSMAG00000020844patz16231.868
ENSSMAG00000019207scrt1b6836.301ENSSMAG00000000056-5536.301
ENSSMAG00000019207scrt1b7834.328ENSSMAG00000013291-9132.576
ENSSMAG00000019207scrt1b5146.795ENSSMAG00000008834-9935.088
ENSSMAG00000019207scrt1b6746.575ENSSMAG00000015356-8739.640
ENSSMAG00000019207scrt1b10074.257ENSSMAG00000005122-10074.257
ENSSMAG00000019207scrt1b8741.758ENSSMAG00000006902-6941.758
ENSSMAG00000019207scrt1b5537.063ENSSMAG00000014597-5837.063
ENSSMAG00000019207scrt1b9538.182ENSSMAG00000019364snai29838.545
ENSSMAG00000019207scrt1b6545.333ENSSMAG00000007561znf2365445.333
ENSSMAG00000019207scrt1b5536.697ENSSMAG00000014864-8246.479
ENSSMAG00000019207scrt1b5044.872ENSSMAG00000002391ZNF3196144.872
ENSSMAG00000019207scrt1b5136.567ENSSMAG00000013828-7336.567
ENSSMAG00000019207scrt1b5141.441ENSSMAG00000009685-8341.441
ENSSMAG00000019207scrt1b8737.313ENSSMAG00000006155-7437.313
ENSSMAG00000019207scrt1b8434.783ENSSMAG00000019949-7134.783
ENSSMAG00000019207scrt1b5437.398ENSSMAG00000004252-8437.398
ENSSMAG00000019207scrt1b7437.594ENSSMAG00000005081-7237.594
ENSSMAG00000019207scrt1b5137.037ENSSMAG00000013676-7936.296
ENSSMAG00000019207scrt1b5436.601ENSSMAG00000014844-9636.601
ENSSMAG00000019207scrt1b5137.168ENSSMAG00000003594-7537.168
ENSSMAG00000019207scrt1b5249.315ENSSMAG00000005076-9942.529
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000019207scrt1b9996.057ENSAPOG00000009279scrt1b9996.057Acanthochromis_polyacanthus
ENSSMAG00000019207scrt1b9669.565ENSAPOG00000003680scrt29669.565Acanthochromis_polyacanthus
ENSSMAG00000019207scrt1b10076.817ENSAPOG00000015197-10076.817Acanthochromis_polyacanthus
ENSSMAG00000019207scrt1b9992.473ENSACIG00000013613scrt1b9992.473Amphilophus_citrinellus
ENSSMAG00000019207scrt1b9658.140ENSACIG00000001296-9657.947Amphilophus_citrinellus
ENSSMAG00000019207scrt1b10075.415ENSACIG00000006586-10075.415Amphilophus_citrinellus
ENSSMAG00000019207scrt1b9668.478ENSACIG00000012604scrt29668.478Amphilophus_citrinellus
ENSSMAG00000019207scrt1b10075.748ENSAOCG00000023304-10075.748Amphiprion_ocellaris
ENSSMAG00000019207scrt1b9996.774ENSAOCG00000003910scrt1b9996.774Amphiprion_ocellaris
ENSSMAG00000019207scrt1b9669.565ENSAOCG00000021557scrt29669.565Amphiprion_ocellaris
ENSSMAG00000019207scrt1b9996.416ENSAPEG00000000869scrt1b9996.416Amphiprion_percula
ENSSMAG00000019207scrt1b9669.565ENSAPEG00000022558scrt29669.565Amphiprion_percula
ENSSMAG00000019207scrt1b10075.748ENSAPEG00000005677-10075.748Amphiprion_percula
ENSSMAG00000019207scrt1b10075.610ENSATEG00000011660-10075.610Anabas_testudineus
ENSSMAG00000019207scrt1b9664.078ENSATEG00000023998scrt29764.078Anabas_testudineus
ENSSMAG00000019207scrt1b9995.341ENSATEG00000002302scrt1b9995.341Anabas_testudineus
ENSSMAG00000019207scrt1b9654.952ENSATEG00000003195-9754.952Anabas_testudineus
ENSSMAG00000019207scrt1b7677.465ENSACAG00000016109SCRT29577.465Anolis_carolinensis
ENSSMAG00000019207scrt1b9995.699ENSACLG00000007162scrt1b9995.699Astatotilapia_calliptera
ENSSMAG00000019207scrt1b10073.355ENSACLG00000012046-10073.355Astatotilapia_calliptera
ENSSMAG00000019207scrt1b9982.437ENSAMXG00000038085scrt1a9983.571Astyanax_mexicanus
ENSSMAG00000019207scrt1b8374.477ENSAMXG00000034158scrt28774.477Astyanax_mexicanus
ENSSMAG00000019207scrt1b9882.734ENSAMXG00000042624SCRT19982.734Astyanax_mexicanus
ENSSMAG00000019207scrt1b5862.346WBGene00000468ces-16061.585Caenorhabditis_elegans
ENSSMAG00000019207scrt1b9983.929ENSCPBG00000018899SCRT19983.929Chrysemys_picta_bellii
ENSSMAG00000019207scrt1b8661.753ENSCPBG00000027613SCRT210061.753Chrysemys_picta_bellii
ENSSMAG00000019207scrt1b8850.813ENSCGRG00000001380Scrt210050.813Cricetulus_griseus_crigri
ENSSMAG00000019207scrt1b9994.624ENSCSEG00000008596scrt1b9994.624Cynoglossus_semilaevis
ENSSMAG00000019207scrt1b9666.007ENSCSEG00000021542scrt29666.007Cynoglossus_semilaevis
ENSSMAG00000019207scrt1b10075.748ENSCSEG00000014892-10075.748Cynoglossus_semilaevis
ENSSMAG00000019207scrt1b10075.083ENSCVAG00000003190-10075.083Cyprinodon_variegatus
ENSSMAG00000019207scrt1b9663.754ENSCVAG00000021038scrt29763.754Cyprinodon_variegatus
ENSSMAG00000019207scrt1b9996.057ENSCVAG00000009561scrt1b9996.057Cyprinodon_variegatus
ENSSMAG00000019207scrt1b9986.071ENSDARG00000100821scrt1a9986.071Danio_rerio
ENSSMAG00000019207scrt1b9886.182ENSDARG00000040214scrt1b9886.182Danio_rerio
ENSSMAG00000019207scrt1b9988.129ENSELUG00000005435scrt1b9988.129Esox_lucius
ENSSMAG00000019207scrt1b9765.000ENSELUG00000023883scrt29666.333Esox_lucius
ENSSMAG00000019207scrt1b10085.765ENSELUG00000022228scrt1a10085.765Esox_lucius
ENSSMAG00000019207scrt1b8272.294ENSFALG00000005718SCRT29672.294Ficedula_albicollis
ENSSMAG00000019207scrt1b9662.132ENSFDAG00000008733SCRT19762.132Fukomys_damarensis
ENSSMAG00000019207scrt1b9996.416ENSFHEG00000014820scrt1b9996.416Fundulus_heteroclitus
ENSSMAG00000019207scrt1b9670.652ENSFHEG00000005732scrt29670.652Fundulus_heteroclitus
ENSSMAG00000019207scrt1b10075.748ENSFHEG00000009794-10075.748Fundulus_heteroclitus
ENSSMAG00000019207scrt1b10060.188ENSGMOG00000019519scrt29860.188Gadus_morhua
ENSSMAG00000019207scrt1b9992.086ENSGMOG00000000629scrt1b9992.086Gadus_morhua
ENSSMAG00000019207scrt1b5893.651ENSGMOG00000013833-5593.651Gadus_morhua
ENSSMAG00000019207scrt1b9665.441ENSGALG00000028912SCRT29765.568Gallus_gallus
ENSSMAG00000019207scrt1b9667.340ENSGAFG00000003093scrt29667.340Gambusia_affinis
ENSSMAG00000019207scrt1b10077.113ENSGAFG00000009650-10077.113Gambusia_affinis
ENSSMAG00000019207scrt1b9996.416ENSGAFG00000007636scrt1b9996.416Gambusia_affinis
ENSSMAG00000019207scrt1b9991.367ENSGACG00000008982scrt1b9991.367Gasterosteus_aculeatus
ENSSMAG00000019207scrt1b10074.411ENSGACG00000004072-10074.411Gasterosteus_aculeatus
ENSSMAG00000019207scrt1b9665.074ENSGAGG00000020761SCRT29665.074Gopherus_agassizii
ENSSMAG00000019207scrt1b9984.532ENSGAGG00000011736SCRT110084.532Gopherus_agassizii
ENSSMAG00000019207scrt1b6580.000ENSGAGG00000020760-7180.000Gopherus_agassizii
ENSSMAG00000019207scrt1b9669.565ENSHBUG00000012492scrt29669.565Haplochromis_burtoni
ENSSMAG00000019207scrt1b9995.699ENSHBUG00000016621scrt1b9995.699Haplochromis_burtoni
ENSSMAG00000019207scrt1b10075.748ENSHBUG00000019101-10075.748Haplochromis_burtoni
ENSSMAG00000019207scrt1b9994.982ENSHCOG00000016704scrt1b9994.982Hippocampus_comes
ENSSMAG00000019207scrt1b9665.986ENSHCOG00000008116scrt29665.986Hippocampus_comes
ENSSMAG00000019207scrt1b10069.863ENSHCOG00000016179-10069.863Hippocampus_comes
ENSSMAG00000019207scrt1b9879.273ENSIPUG00000005547-9979.273Ictalurus_punctatus
ENSSMAG00000019207scrt1b9984.946ENSIPUG00000004551scrt1a9984.946Ictalurus_punctatus
ENSSMAG00000019207scrt1b5085.106ENSSTOG00000032944SCRT28480.255Ictidomys_tridecemlineatus
ENSSMAG00000019207scrt1b9664.401ENSKMAG00000018087scrt29764.401Kryptolebias_marmoratus
ENSSMAG00000019207scrt1b9996.416ENSKMAG00000005484scrt1b9996.416Kryptolebias_marmoratus
ENSSMAG00000019207scrt1b10073.754ENSKMAG00000009489-10075.415Kryptolebias_marmoratus
ENSSMAG00000019207scrt1b10075.251ENSLBEG00000023388-10075.920Labrus_bergylta
ENSSMAG00000019207scrt1b9663.548ENSLBEG00000015419scrt29763.548Labrus_bergylta
ENSSMAG00000019207scrt1b9983.929ENSLACG00000003588SCRT19983.929Latimeria_chalumnae
ENSSMAG00000019207scrt1b9988.214ENSLOCG00000007573scrt1b9988.214Lepisosteus_oculatus
ENSSMAG00000019207scrt1b9653.722ENSLOCG00000002246scrt29754.487Lepisosteus_oculatus
ENSSMAG00000019207scrt1b6393.333ENSMFAG00000035496SCRT17881.437Macaca_fascicularis
ENSSMAG00000019207scrt1b9996.416ENSMAMG00000011698scrt1b9996.416Mastacembelus_armatus
ENSSMAG00000019207scrt1b9664.401ENSMAMG00000001291scrt29763.754Mastacembelus_armatus
ENSSMAG00000019207scrt1b9995.699ENSMZEG00005005627scrt1b9995.699Maylandia_zebra
ENSSMAG00000019207scrt1b9669.565ENSMZEG00005026445scrt29669.565Maylandia_zebra
ENSSMAG00000019207scrt1b10075.748ENSMZEG00005026702-10075.748Maylandia_zebra
ENSSMAG00000019207scrt1b8270.870ENSMGAG00000016579SCRT29670.870Meleagris_gallopavo
ENSSMAG00000019207scrt1b9664.379ENSMMOG00000009272scrt29764.379Mola_mola
ENSSMAG00000019207scrt1b9993.548ENSMMOG00000003327scrt1b9993.548Mola_mola
ENSSMAG00000019207scrt1b10075.748ENSMMOG00000018345-10075.748Mola_mola
ENSSMAG00000019207scrt1b9668.459ENSMALG00000013656scrt29668.459Monopterus_albus
ENSSMAG00000019207scrt1b9997.133ENSMALG00000012704scrt1b9997.133Monopterus_albus
ENSSMAG00000019207scrt1b6469.565ENSNGAG00000020815Scrt29368.041Nannospalax_galili
ENSSMAG00000019207scrt1b9669.203ENSNBRG00000007221scrt29669.203Neolamprologus_brichardi
ENSSMAG00000019207scrt1b10075.415ENSNBRG00000014882-10075.415Neolamprologus_brichardi
ENSSMAG00000019207scrt1b9990.681ENSNBRG00000013983scrt1b9990.681Neolamprologus_brichardi
ENSSMAG00000019207scrt1b9661.733ENSONIG00000003152-9661.733Oreochromis_niloticus
ENSSMAG00000019207scrt1b9672.222ENSONIG00000019809-9972.222Oreochromis_niloticus
ENSSMAG00000019207scrt1b9995.699ENSONIG00000006007scrt1b9995.699Oreochromis_niloticus
ENSSMAG00000019207scrt1b9664.078ENSONIG00000016758scrt29764.078Oreochromis_niloticus
ENSSMAG00000019207scrt1b10072.848ENSORLG00000022825-10072.848Oryzias_latipes
ENSSMAG00000019207scrt1b9994.624ENSORLG00000025651scrt1b9994.624Oryzias_latipes
ENSSMAG00000019207scrt1b9664.401ENSORLG00000024051scrt29764.401Oryzias_latipes
ENSSMAG00000019207scrt1b9994.624ENSORLG00020012967scrt1b9994.624Oryzias_latipes_hni
ENSSMAG00000019207scrt1b9664.401ENSORLG00020011478scrt29764.401Oryzias_latipes_hni
ENSSMAG00000019207scrt1b9994.624ENSORLG00015019165scrt1b9994.624Oryzias_latipes_hsok
ENSSMAG00000019207scrt1b9664.401ENSORLG00015005524scrt29764.401Oryzias_latipes_hsok
ENSSMAG00000019207scrt1b10074.172ENSORLG00015010104-10074.172Oryzias_latipes_hsok
ENSSMAG00000019207scrt1b9664.725ENSOMEG00000002661scrt29764.725Oryzias_melastigma
ENSSMAG00000019207scrt1b10076.000ENSOMEG00000000286-10076.000Oryzias_melastigma
ENSSMAG00000019207scrt1b9994.624ENSOMEG00000003925scrt1b9994.624Oryzias_melastigma
ENSSMAG00000019207scrt1b9986.380ENSPKIG00000022303SCRT19986.380Paramormyrops_kingsleyae
ENSSMAG00000019207scrt1b9985.357ENSPKIG00000020085scrt1a9985.357Paramormyrops_kingsleyae
ENSSMAG00000019207scrt1b9669.675ENSPMGG00000016561scrt29669.675Periophthalmus_magnuspinnatus
ENSSMAG00000019207scrt1b10074.237ENSPMGG00000021402-10074.237Periophthalmus_magnuspinnatus
ENSSMAG00000019207scrt1b9990.681ENSPMGG00000002260scrt1b9990.681Periophthalmus_magnuspinnatus
ENSSMAG00000019207scrt1b10076.923ENSPFOG00000005616-10076.923Poecilia_formosa
ENSSMAG00000019207scrt1b9996.416ENSPFOG00000017719scrt1b9996.416Poecilia_formosa
ENSSMAG00000019207scrt1b9664.078ENSPFOG00000007738scrt29764.078Poecilia_formosa
ENSSMAG00000019207scrt1b10076.923ENSPLAG00000011718-10076.923Poecilia_latipinna
ENSSMAG00000019207scrt1b9670.758ENSPLAG00000005765scrt29670.758Poecilia_latipinna
ENSSMAG00000019207scrt1b9996.416ENSPLAG00000009876scrt1b9996.416Poecilia_latipinna
ENSSMAG00000019207scrt1b9996.416ENSPMEG00000013274scrt1b9996.416Poecilia_mexicana
ENSSMAG00000019207scrt1b9670.758ENSPMEG00000001538scrt29670.758Poecilia_mexicana
ENSSMAG00000019207scrt1b10076.923ENSPMEG00000011706-10076.923Poecilia_mexicana
ENSSMAG00000019207scrt1b9996.416ENSPREG00000018985scrt1b9996.416Poecilia_reticulata
ENSSMAG00000019207scrt1b9664.078ENSPREG00000001147scrt29764.078Poecilia_reticulata
ENSSMAG00000019207scrt1b10076.254ENSPREG00000012166-10076.254Poecilia_reticulata
ENSSMAG00000019207scrt1b9669.565ENSPNYG00000013109scrt29669.565Pundamilia_nyererei
ENSSMAG00000019207scrt1b10075.415ENSPNYG00000008865-10075.415Pundamilia_nyererei
ENSSMAG00000019207scrt1b9995.699ENSPNYG00000017733scrt1b9995.699Pundamilia_nyererei
ENSSMAG00000019207scrt1b9985.000ENSPNAG00000017415scrt1a9985.000Pygocentrus_nattereri
ENSSMAG00000019207scrt1b9883.394ENSPNAG00000027880-9983.394Pygocentrus_nattereri
ENSSMAG00000019207scrt1b9985.714ENSSFOG00015001195SCRT19985.714Scleropages_formosus
ENSSMAG00000019207scrt1b9865.101ENSSDUG00000001637scrt29665.772Seriola_dumerili
ENSSMAG00000019207scrt1b10076.744ENSSDUG00000013215-10076.744Seriola_dumerili
ENSSMAG00000019207scrt1b9996.774ENSSDUG00000007752scrt1b9996.774Seriola_dumerili
ENSSMAG00000019207scrt1b10076.744ENSSLDG00000016454-10076.744Seriola_lalandi_dorsalis
ENSSMAG00000019207scrt1b9996.774ENSSLDG00000017166scrt1b9996.774Seriola_lalandi_dorsalis
ENSSMAG00000019207scrt1b9663.754ENSSLDG00000013565scrt29764.401Seriola_lalandi_dorsalis
ENSSMAG00000019207scrt1b9666.790ENSSPUG00000018637SCRT29766.790Sphenodon_punctatus
ENSSMAG00000019207scrt1b9669.928ENSSPAG00000014018scrt29669.928Stegastes_partitus
ENSSMAG00000019207scrt1b10074.086ENSSPAG00000006788-10075.748Stegastes_partitus
ENSSMAG00000019207scrt1b9996.774ENSSPAG00000002200scrt1b9996.774Stegastes_partitus
ENSSMAG00000019207scrt1b8272.174ENSTGUG00000006801SCRT29972.174Taeniopygia_guttata
ENSSMAG00000019207scrt1b10075.333ENSTRUG00000012719-10075.333Takifugu_rubripes
ENSSMAG00000019207scrt1b8677.642ENSTRUG00000019558-8277.642Takifugu_rubripes
ENSSMAG00000019207scrt1b9892.364ENSTRUG00000011637scrt1b9992.364Takifugu_rubripes
ENSSMAG00000019207scrt1b9667.354ENSTRUG00000007620scrt29667.354Takifugu_rubripes
ENSSMAG00000019207scrt1b9669.892ENSTNIG00000012473scrt29769.892Tetraodon_nigroviridis
ENSSMAG00000019207scrt1b9992.115ENSTNIG00000018384scrt1b9992.115Tetraodon_nigroviridis
ENSSMAG00000019207scrt1b9996.057ENSXCOG00000019675scrt1b9996.057Xiphophorus_couchianus
ENSSMAG00000019207scrt1b10076.408ENSXCOG00000019861-10076.408Xiphophorus_couchianus
ENSSMAG00000019207scrt1b9667.677ENSXCOG00000014367scrt29667.677Xiphophorus_couchianus
ENSSMAG00000019207scrt1b9664.401ENSXMAG00000028567scrt29764.401Xiphophorus_maculatus
ENSSMAG00000019207scrt1b10077.258ENSXMAG00000015353-10077.258Xiphophorus_maculatus
ENSSMAG00000019207scrt1b9996.057ENSXMAG00000027885scrt1b9996.057Xiphophorus_maculatus

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