EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019218 (Gene tree)
Gene ID: -
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt-like transcription factor 4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 7950 bases
Position: chr11:20280666-20288615
Accession: ZDB-GENE-060328-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000031345	zf-C2H2	PF00096.26	1.5e-31	1	6
ENSSMAP00000031345	zf-C2H2	PF00096.26	1.5e-31	2	6
ENSSMAP00000031345	zf-C2H2	PF00096.26	1.5e-31	3	6
ENSSMAP00000031345	zf-C2H2	PF00096.26	1.5e-31	4	6
ENSSMAP00000031345	zf-C2H2	PF00096.26	1.5e-31	5	6
ENSSMAP00000031345	zf-C2H2	PF00096.26	1.5e-31	6	6
ENSSMAP00000031345	zf-met	PF12874.7	1.3e-13	1	2
ENSSMAP00000031345	zf-met	PF12874.7	1.3e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000031732	-	5095	-	ENSSMAP00000031345	1087 (aa)	-	A0A2U9C0J9

Gene Model

Click here to download ENSSMAG00000019218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019218	sall4	55	47.059	ENSSMAG00000019980	-	54	47.059
ENSSMAG00000019218	sall4	67	50.000	ENSSMAG00000007561	znf236	63	50.000
ENSSMAG00000019218	sall4	51	42.593	ENSSMAG00000008907	zbtb41	81	42.593
ENSSMAG00000019218	sall4	62	45.070	ENSSMAG00000013663	-	98	55.556
ENSSMAG00000019218	sall4	52	48.980	ENSSMAG00000005076	-	99	48.889
ENSSMAG00000019218	sall4	88	67.308	ENSSMAG00000007674	sall3a	72	42.575
ENSSMAG00000019218	sall4	83	70.435	ENSSMAG00000019762	sall3b	58	70.435
ENSSMAG00000019218	sall4	56	53.333	ENSSMAG00000015347	-	84	51.111
ENSSMAG00000019218	sall4	56	47.170	ENSSMAG00000015282	-	81	47.170
ENSSMAG00000019218	sall4	94	65.385	ENSSMAG00000009160	sall1a	90	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019218	sall4	99	43.243	ENSG00000101115	SALL4	91	67.308	Homo_sapiens
ENSSMAG00000019218	sall4	99	82.784	ENSAPOG00000002465	sall4	100	82.509	Acanthochromis_polyacanthus
ENSSMAG00000019218	sall4	99	43.284	ENSAMEG00000013250	-	99	44.661	Ailuropoda_melanoleuca
ENSSMAG00000019218	sall4	99	79.780	ENSACIG00000017298	sall4	100	79.506	Amphilophus_citrinellus
ENSSMAG00000019218	sall4	99	82.967	ENSAOCG00000023678	sall4	100	82.967	Amphiprion_ocellaris
ENSSMAG00000019218	sall4	99	83.242	ENSAPEG00000000751	sall4	100	83.242	Amphiprion_percula
ENSSMAG00000019218	sall4	99	84.326	ENSATEG00000024480	sall4	100	84.326	Anabas_testudineus
ENSSMAG00000019218	sall4	99	51.134	ENSAPLG00000006498	SALL4	100	51.394	Anas_platyrhynchos
ENSSMAG00000019218	sall4	99	51.778	ENSACAG00000012748	SALL4	100	52.107	Anolis_carolinensis
ENSSMAG00000019218	sall4	99	43.440	ENSANAG00000023352	SALL4	100	43.723	Aotus_nancymaae
ENSSMAG00000019218	sall4	99	79.689	ENSACLG00000017851	sall4	100	79.323	Astatotilapia_calliptera
ENSSMAG00000019218	sall4	99	66.338	ENSAMXG00000001254	sall4	99	66.729	Astyanax_mexicanus
ENSSMAG00000019218	sall4	99	41.761	ENSBTAG00000003101	SALL4	100	42.284	Bos_taurus
ENSSMAG00000019218	sall4	80	45.475	ENSCJAG00000000591	SALL4	97	45.475	Callithrix_jacchus
ENSSMAG00000019218	sall4	99	43.380	ENSCAFG00000011738	-	100	43.866	Canis_familiaris
ENSSMAG00000019218	sall4	99	43.354	ENSCAFG00020021870	SALL4	100	43.838	Canis_lupus_dingo
ENSSMAG00000019218	sall4	99	41.463	ENSCHIG00000026270	SALL4	100	41.812	Capra_hircus
ENSSMAG00000019218	sall4	99	42.284	ENSTSYG00000007359	SALL4	100	58.794	Carlito_syrichta
ENSSMAG00000019218	sall4	96	43.843	ENSCAPG00000012135	SALL4	95	43.937	Cavia_aperea
ENSSMAG00000019218	sall4	99	39.255	ENSCCAG00000029512	-	100	62.000	Cebus_capucinus
ENSSMAG00000019218	sall4	99	43.319	ENSCATG00000030757	SALL4	100	42.994	Cercocebus_atys
ENSSMAG00000019218	sall4	99	43.673	ENSCLAG00000010479	SALL4	100	43.585	Chinchilla_lanigera
ENSSMAG00000019218	sall4	99	43.231	ENSCSAG00000015269	SALL4	100	42.982	Chlorocebus_sabaeus
ENSSMAG00000019218	sall4	99	52.327	ENSCPBG00000014995	SALL4	99	52.636	Chrysemys_picta_bellii
ENSSMAG00000019218	sall4	99	43.243	ENSCANG00000036463	SALL4	100	42.994	Colobus_angolensis_palliatus
ENSSMAG00000019218	sall4	99	42.133	ENSCGRG00001019569	Sall4	87	63.462	Cricetulus_griseus_chok1gshd
ENSSMAG00000019218	sall4	99	41.885	ENSCGRG00000000462	Sall4	100	77.778	Cricetulus_griseus_crigri
ENSSMAG00000019218	sall4	99	82.299	ENSCSEG00000014604	sall4	100	82.391	Cynoglossus_semilaevis
ENSSMAG00000019218	sall4	99	78.480	ENSCVAG00000010815	sall4	100	78.571	Cyprinodon_variegatus
ENSSMAG00000019218	sall4	99	64.833	ENSDARG00000044485	sall4	99	64.833	Danio_rerio
ENSSMAG00000019218	sall4	99	44.115	ENSDNOG00000040633	SALL4	100	44.444	Dasypus_novemcinctus
ENSSMAG00000019218	sall4	99	41.416	ENSDORG00000012841	Sall4	100	73.171	Dipodomys_ordii
ENSSMAG00000019218	sall4	65	65.385	ENSETEG00000012475	-	58	65.385	Echinops_telfairi
ENSSMAG00000019218	sall4	64	58.621	ENSEBUG00000015425	-	100	58.621	Eptatretus_burgeri
ENSSMAG00000019218	sall4	99	44.081	ENSECAG00000018533	SALL4	100	44.141	Equus_caballus
ENSSMAG00000019218	sall4	99	43.241	ENSEEUG00000003649	SALL4	99	43.069	Erinaceus_europaeus
ENSSMAG00000019218	sall4	99	66.282	ENSELUG00000005696	sall4	100	66.298	Esox_lucius
ENSSMAG00000019218	sall4	99	43.965	ENSFCAG00000002822	SALL4	100	43.898	Felis_catus
ENSSMAG00000019218	sall4	99	49.956	ENSFALG00000013149	SALL4	100	50.524	Ficedula_albicollis
ENSSMAG00000019218	sall4	99	42.467	ENSFDAG00000017812	SALL4	92	63.462	Fukomys_damarensis
ENSSMAG00000019218	sall4	99	77.464	ENSFHEG00000014187	sall4	100	77.007	Fundulus_heteroclitus
ENSSMAG00000019218	sall4	99	72.562	ENSGMOG00000003822	sall4	100	72.744	Gadus_morhua
ENSSMAG00000019218	sall4	99	51.042	ENSGALG00000041365	SALL4	100	51.839	Gallus_gallus
ENSSMAG00000019218	sall4	99	78.866	ENSGAFG00000019925	sall4	100	78.866	Gambusia_affinis
ENSSMAG00000019218	sall4	99	79.616	ENSGACG00000011124	sall4	100	79.616	Gasterosteus_aculeatus
ENSSMAG00000019218	sall4	99	52.281	ENSGAGG00000002297	SALL4	99	52.239	Gopherus_agassizii
ENSSMAG00000019218	sall4	99	43.069	ENSGGOG00000001832	SALL4	100	42.907	Gorilla_gorilla
ENSSMAG00000019218	sall4	99	79.872	ENSHBUG00000007327	sall4	100	79.506	Haplochromis_burtoni
ENSSMAG00000019218	sall4	96	42.962	ENSHGLG00000009043	SALL4	95	42.962	Heterocephalus_glaber_female
ENSSMAG00000019218	sall4	96	42.962	ENSHGLG00100002722	SALL4	95	42.962	Heterocephalus_glaber_male
ENSSMAG00000019218	sall4	99	78.134	ENSHCOG00000008519	sall4	100	78.134	Hippocampus_comes
ENSSMAG00000019218	sall4	99	64.615	ENSIPUG00000019170	sall4	99	64.887	Ictalurus_punctatus
ENSSMAG00000019218	sall4	61	56.219	ENSSTOG00000025002	SALL4	100	83.099	Ictidomys_tridecemlineatus
ENSSMAG00000019218	sall4	99	43.342	ENSJJAG00000020688	Sall4	99	84.507	Jaculus_jaculus
ENSSMAG00000019218	sall4	99	80.843	ENSKMAG00000002501	sall4	100	81.210	Kryptolebias_marmoratus
ENSSMAG00000019218	sall4	99	83.410	ENSLBEG00000019951	sall4	100	83.410	Labrus_bergylta
ENSSMAG00000019218	sall4	96	47.689	ENSLACG00000013898	SALL4	99	57.143	Latimeria_chalumnae
ENSSMAG00000019218	sall4	99	62.140	ENSLOCG00000002427	sall4	100	62.443	Lepisosteus_oculatus
ENSSMAG00000019218	sall4	99	43.739	ENSLAFG00000004309	SALL4	100	43.887	Loxodonta_africana
ENSSMAG00000019218	sall4	99	43.319	ENSMFAG00000027169	SALL4	100	42.994	Macaca_fascicularis
ENSSMAG00000019218	sall4	87	44.740	ENSMMUG00000003870	SALL4	100	57.789	Macaca_mulatta
ENSSMAG00000019218	sall4	87	44.740	ENSMNEG00000035995	SALL4	71	67.308	Macaca_nemestrina
ENSSMAG00000019218	sall4	99	43.406	ENSMLEG00000030467	SALL4	100	43.081	Mandrillus_leucophaeus
ENSSMAG00000019218	sall4	99	83.666	ENSMAMG00000005223	sall4	100	83.666	Mastacembelus_armatus
ENSSMAG00000019218	sall4	99	79.597	ENSMZEG00005023418	sall4	100	79.231	Maylandia_zebra
ENSSMAG00000019218	sall4	75	65.385	ENSMGAG00000009344	SALL4	100	65.385	Meleagris_gallopavo
ENSSMAG00000019218	sall4	99	41.746	ENSMAUG00000015814	Sall4	100	74.699	Mesocricetus_auratus
ENSSMAG00000019218	sall4	99	43.108	ENSMICG00000000027	SALL4	100	43.524	Microcebus_murinus
ENSSMAG00000019218	sall4	99	42.257	ENSMOCG00000018245	Sall4	100	82.192	Microtus_ochrogaster
ENSSMAG00000019218	sall4	99	82.951	ENSMMOG00000014929	sall4	100	82.951	Mola_mola
ENSSMAG00000019218	sall4	99	47.483	ENSMODG00000016387	SALL4	97	47.301	Monodelphis_domestica
ENSSMAG00000019218	sall4	99	85.531	ENSMALG00000018709	sall4	100	85.728	Monopterus_albus
ENSSMAG00000019218	sall4	99	42.281	MGP_CAROLIEiJ_G0024723	Sall4	100	84.722	Mus_caroli
ENSSMAG00000019218	sall4	99	42.857	ENSMUSG00000027547	Sall4	100	84.722	Mus_musculus
ENSSMAG00000019218	sall4	99	41.709	MGP_PahariEiJ_G0026164	Sall4	100	84.722	Mus_pahari
ENSSMAG00000019218	sall4	99	42.735	MGP_SPRETEiJ_G0025643	Sall4	100	84.722	Mus_spretus
ENSSMAG00000019218	sall4	99	42.944	ENSMPUG00000017543	SALL4	96	42.994	Mustela_putorius_furo
ENSSMAG00000019218	sall4	99	40.661	ENSMLUG00000008405	-	100	40.737	Myotis_lucifugus
ENSSMAG00000019218	sall4	96	43.575	ENSMLUG00000007060	-	98	43.506	Myotis_lucifugus
ENSSMAG00000019218	sall4	99	33.755	ENSMLUG00000028073	-	99	33.394	Myotis_lucifugus
ENSSMAG00000019218	sall4	99	42.782	ENSNGAG00000017833	Sall4	100	42.857	Nannospalax_galili
ENSSMAG00000019218	sall4	99	80.128	ENSNBRG00000001829	sall4	100	79.762	Neolamprologus_brichardi
ENSSMAG00000019218	sall4	99	43.156	ENSNLEG00000007013	SALL4	100	42.907	Nomascus_leucogenys
ENSSMAG00000019218	sall4	84	65.385	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSSMAG00000019218	sall4	99	43.536	ENSOPRG00000011640	SALL4	100	43.570	Ochotona_princeps
ENSSMAG00000019218	sall4	99	80.238	ENSONIG00000016557	sall4	100	79.963	Oreochromis_niloticus
ENSSMAG00000019218	sall4	99	51.200	ENSOANG00000008667	SALL4	97	51.366	Ornithorhynchus_anatinus
ENSSMAG00000019218	sall4	96	43.321	ENSOCUG00000011797	SALL4	98	43.321	Oryctolagus_cuniculus
ENSSMAG00000019218	sall4	99	76.212	ENSORLG00000016130	sall4	100	76.395	Oryzias_latipes
ENSSMAG00000019218	sall4	99	76.212	ENSORLG00020007339	sall4	100	76.395	Oryzias_latipes_hni
ENSSMAG00000019218	sall4	99	76.029	ENSORLG00015002265	sall4	100	76.212	Oryzias_latipes_hsok
ENSSMAG00000019218	sall4	99	77.493	ENSOMEG00000017344	sall4	100	77.676	Oryzias_melastigma
ENSSMAG00000019218	sall4	96	43.550	ENSOGAG00000013799	SALL4	99	43.948	Otolemur_garnettii
ENSSMAG00000019218	sall4	99	39.701	ENSOARG00000014570	SALL4	100	39.789	Ovis_aries
ENSSMAG00000019218	sall4	99	43.081	ENSPPAG00000038064	SALL4	100	43.081	Pan_paniscus
ENSSMAG00000019218	sall4	99	43.739	ENSPPRG00000008677	SALL4	100	43.937	Panthera_pardus
ENSSMAG00000019218	sall4	99	43.069	ENSPTRG00000013631	SALL4	100	42.907	Pan_troglodytes
ENSSMAG00000019218	sall4	87	44.740	ENSPANG00000021792	SALL4	71	67.308	Papio_anubis
ENSSMAG00000019218	sall4	99	63.612	ENSPKIG00000007074	sall4	100	63.884	Paramormyrops_kingsleyae
ENSSMAG00000019218	sall4	99	51.790	ENSPSIG00000009066	SALL4	99	51.613	Pelodiscus_sinensis
ENSSMAG00000019218	sall4	99	68.566	ENSPMGG00000022551	sall4	100	68.107	Periophthalmus_magnuspinnatus
ENSSMAG00000019218	sall4	99	42.607	ENSPEMG00000022706	Sall4	100	84.722	Peromyscus_maniculatus_bairdii
ENSSMAG00000019218	sall4	99	49.526	ENSPCIG00000022838	SALL4	97	49.658	Phascolarctos_cinereus
ENSSMAG00000019218	sall4	99	78.591	ENSPFOG00000001442	sall4	100	78.317	Poecilia_formosa
ENSSMAG00000019218	sall4	99	78.500	ENSPLAG00000008760	sall4	100	78.225	Poecilia_latipinna
ENSSMAG00000019218	sall4	99	78.591	ENSPMEG00000008497	sall4	100	78.317	Poecilia_mexicana
ENSSMAG00000019218	sall4	99	78.317	ENSPREG00000021140	sall4	100	78.042	Poecilia_reticulata
ENSSMAG00000019218	sall4	99	43.739	ENSPPYG00000011138	SALL4	100	43.739	Pongo_abelii
ENSSMAG00000019218	sall4	99	41.310	ENSPCAG00000004726	SALL4	99	40.779	Procavia_capensis
ENSSMAG00000019218	sall4	99	43.248	ENSPCOG00000016321	SALL4	93	67.308	Propithecus_coquereli
ENSSMAG00000019218	sall4	94	43.084	ENSPVAG00000002075	SALL4	94	43.124	Pteropus_vampyrus
ENSSMAG00000019218	sall4	99	79.853	ENSPNYG00000021738	sall4	100	79.487	Pundamilia_nyererei
ENSSMAG00000019218	sall4	99	66.636	ENSPNAG00000020929	sall4	99	66.818	Pygocentrus_nattereri
ENSSMAG00000019218	sall4	99	42.414	ENSRNOG00000050035	Sall4	87	65.385	Rattus_norvegicus
ENSSMAG00000019218	sall4	99	43.330	ENSRBIG00000039876	SALL4	100	43.081	Rhinopithecus_bieti
ENSSMAG00000019218	sall4	99	43.330	ENSRROG00000036585	SALL4	100	43.081	Rhinopithecus_roxellana
ENSSMAG00000019218	sall4	99	43.898	ENSSBOG00000030011	SALL4	100	43.810	Saimiri_boliviensis_boliviensis
ENSSMAG00000019218	sall4	95	65.385	ENSSHAG00000018013	SALL4	88	65.385	Sarcophilus_harrisii
ENSSMAG00000019218	sall4	99	63.612	ENSSFOG00015021075	sall4	100	63.793	Scleropages_formosus
ENSSMAG00000019218	sall4	99	88.726	ENSSDUG00000004657	sall4	100	88.726	Seriola_dumerili
ENSSMAG00000019218	sall4	99	88.634	ENSSLDG00000004973	sall4	100	88.634	Seriola_lalandi_dorsalis
ENSSMAG00000019218	sall4	99	84.707	ENSSPAG00000001978	sall4	100	84.524	Stegastes_partitus
ENSSMAG00000019218	sall4	99	42.795	ENSSSCG00000007479	SALL4	100	42.361	Sus_scrofa
ENSSMAG00000019218	sall4	99	78.683	ENSTRUG00000007410	sall4	100	78.408	Takifugu_rubripes
ENSSMAG00000019218	sall4	99	77.106	ENSTNIG00000012460	sall4	100	77.198	Tetraodon_nigroviridis
ENSSMAG00000019218	sall4	97	43.080	ENSTTRG00000007753	SALL4	99	42.792	Tursiops_truncatus
ENSSMAG00000019218	sall4	99	43.020	ENSUAMG00000010113	SALL4	100	43.286	Ursus_americanus
ENSSMAG00000019218	sall4	97	43.306	ENSUMAG00000024274	SALL4	98	43.121	Ursus_maritimus
ENSSMAG00000019218	sall4	99	48.601	ENSXETG00000012326	sall4	100	48.376	Xenopus_tropicalis
ENSSMAG00000019218	sall4	99	72.176	ENSXCOG00000015467	sall4	100	71.901	Xiphophorus_couchianus
ENSSMAG00000019218	sall4	99	71.795	ENSXMAG00000012692	sall4	100	71.324	Xiphophorus_maculatus