EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019271 (Gene tree)
Gene ID: -
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 12088 bases
Position: chr18:13305191-13317278
Accession: ZDB-GENE-070803-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000031478	TUDOR	PF00567.24	1.6e-118	1	4
ENSSMAP00000031478	TUDOR	PF00567.24	1.6e-118	2	4
ENSSMAP00000031478	TUDOR	PF00567.24	1.6e-118	3	4
ENSSMAP00000031478	TUDOR	PF00567.24	1.6e-118	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000031864	-	3423	-	ENSSMAP00000031478	1140 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000019271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019271	tdrd1	76	30.088	ENSSMAG00000014450	-	75	30.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019271	tdrd1	88	34.638	ENSG00000095627	TDRD1	82	35.244	Homo_sapiens
ENSSMAG00000019271	tdrd1	98	66.233	ENSAPOG00000023199	tdrd1	99	66.493	Acanthochromis_polyacanthus
ENSSMAG00000019271	tdrd1	87	33.399	ENSAMEG00000015182	TDRD1	82	33.497	Ailuropoda_melanoleuca
ENSSMAG00000019271	tdrd1	98	66.225	ENSACIG00000010576	tdrd1	98	66.136	Amphilophus_citrinellus
ENSSMAG00000019271	tdrd1	98	71.355	ENSAOCG00000007059	tdrd1	94	66.521	Amphiprion_ocellaris
ENSSMAG00000019271	tdrd1	99	65.184	ENSAPEG00000017049	tdrd1	95	67.027	Amphiprion_percula
ENSSMAG00000019271	tdrd1	96	68.530	ENSATEG00000021627	tdrd1	95	68.530	Anabas_testudineus
ENSSMAG00000019271	tdrd1	88	31.244	ENSAPLG00000012609	TDRD1	93	31.244	Anas_platyrhynchos
ENSSMAG00000019271	tdrd1	87	31.866	ENSACAG00000009854	TDRD1	77	31.866	Anolis_carolinensis
ENSSMAG00000019271	tdrd1	86	35.363	ENSANAG00000035710	TDRD1	80	35.363	Aotus_nancymaae
ENSSMAG00000019271	tdrd1	97	64.643	ENSACLG00000014107	tdrd1	91	65.725	Astatotilapia_calliptera
ENSSMAG00000019271	tdrd1	97	46.638	ENSAMXG00000015146	tdrd1	95	46.544	Astyanax_mexicanus
ENSSMAG00000019271	tdrd1	93	33.364	ENSBTAG00000006855	TDRD1	84	33.845	Bos_taurus
ENSSMAG00000019271	tdrd1	87	35.368	ENSCJAG00000019270	TDRD1	81	35.368	Callithrix_jacchus
ENSSMAG00000019271	tdrd1	87	33.463	ENSCAFG00000011266	TDRD1	82	33.463	Canis_familiaris
ENSSMAG00000019271	tdrd1	91	33.564	ENSCAFG00020012373	TDRD1	82	34.093	Canis_lupus_dingo
ENSSMAG00000019271	tdrd1	88	35.512	ENSCHIG00000012766	TDRD1	83	35.512	Capra_hircus
ENSSMAG00000019271	tdrd1	87	35.121	ENSTSYG00000004935	TDRD1	81	35.121	Carlito_syrichta
ENSSMAG00000019271	tdrd1	91	31.955	ENSCPOG00000004190	TDRD1	82	32.769	Cavia_porcellus
ENSSMAG00000019271	tdrd1	87	34.356	ENSCCAG00000027375	TDRD1	82	34.356	Cebus_capucinus
ENSSMAG00000019271	tdrd1	88	35.647	ENSCATG00000035999	TDRD1	83	34.881	Cercocebus_atys
ENSSMAG00000019271	tdrd1	86	34.462	ENSCLAG00000003935	TDRD1	81	34.462	Chinchilla_lanigera
ENSSMAG00000019271	tdrd1	87	34.980	ENSCSAG00000005071	TDRD1	81	34.980	Chlorocebus_sabaeus
ENSSMAG00000019271	tdrd1	89	45.385	ENSCHOG00000001690	TDRD1	67	45.385	Choloepus_hoffmanni
ENSSMAG00000019271	tdrd1	85	35.602	ENSCPBG00000003780	TDRD1	83	34.970	Chrysemys_picta_bellii
ENSSMAG00000019271	tdrd1	87	35.313	ENSCANG00000035172	TDRD1	81	35.313	Colobus_angolensis_palliatus
ENSSMAG00000019271	tdrd1	94	34.847	ENSCGRG00001004632	Tdrd1	85	35.241	Cricetulus_griseus_chok1gshd
ENSSMAG00000019271	tdrd1	90	34.637	ENSCGRG00000004981	Tdrd1	81	34.980	Cricetulus_griseus_crigri
ENSSMAG00000019271	tdrd1	92	56.764	ENSCSEG00000006983	tdrd1	93	57.644	Cynoglossus_semilaevis
ENSSMAG00000019271	tdrd1	86	58.502	ENSCVAG00000020980	tdrd1	94	58.502	Cyprinodon_variegatus
ENSSMAG00000019271	tdrd1	93	45.845	ENSDARG00000007465	tdrd1	92	45.845	Danio_rerio
ENSSMAG00000019271	tdrd1	90	32.863	ENSDNOG00000012114	TDRD1	82	33.399	Dasypus_novemcinctus
ENSSMAG00000019271	tdrd1	87	33.923	ENSDORG00000009986	Tdrd1	83	33.923	Dipodomys_ordii
ENSSMAG00000019271	tdrd1	83	39.286	ENSETEG00000020143	TDRD1	73	39.286	Echinops_telfairi
ENSSMAG00000019271	tdrd1	87	32.711	ENSEASG00005014802	TDRD1	82	32.711	Equus_asinus_asinus
ENSSMAG00000019271	tdrd1	87	36.041	ENSECAG00000009748	TDRD1	78	36.041	Equus_caballus
ENSSMAG00000019271	tdrd1	86	32.297	ENSEEUG00000010076	TDRD1	80	32.297	Erinaceus_europaeus
ENSSMAG00000019271	tdrd1	96	48.549	ENSELUG00000024364	tdrd1	94	48.549	Esox_lucius
ENSSMAG00000019271	tdrd1	91	33.631	ENSFCAG00000000632	TDRD1	81	34.164	Felis_catus
ENSSMAG00000019271	tdrd1	84	32.341	ENSFALG00000002237	TDRD1	94	33.680	Ficedula_albicollis
ENSSMAG00000019271	tdrd1	86	33.828	ENSFDAG00000013225	TDRD1	82	33.828	Fukomys_damarensis
ENSSMAG00000019271	tdrd1	96	45.728	ENSFHEG00000009203	tdrd1	97	44.696	Fundulus_heteroclitus
ENSSMAG00000019271	tdrd1	77	54.128	ENSGMOG00000016797	-	69	54.128	Gadus_morhua
ENSSMAG00000019271	tdrd1	92	30.235	ENSGALG00000046180	TDRD1	90	30.976	Gallus_gallus
ENSSMAG00000019271	tdrd1	98	55.265	ENSGAFG00000002668	tdrd1	99	55.682	Gambusia_affinis
ENSSMAG00000019271	tdrd1	82	66.033	ENSGACG00000006590	tdrd1	100	66.033	Gasterosteus_aculeatus
ENSSMAG00000019271	tdrd1	88	34.418	ENSGGOG00000004250	TDRD1	82	34.418	Gorilla_gorilla
ENSSMAG00000019271	tdrd1	95	65.725	ENSHBUG00000005216	tdrd1	98	61.823	Haplochromis_burtoni
ENSSMAG00000019271	tdrd1	90	31.921	ENSHGLG00000010877	TDRD1	81	32.497	Heterocephalus_glaber_female
ENSSMAG00000019271	tdrd1	86	35.152	ENSHGLG00100013857	TDRD1	85	35.152	Heterocephalus_glaber_male
ENSSMAG00000019271	tdrd1	93	47.345	ENSHCOG00000002840	tdrd1	94	47.345	Hippocampus_comes
ENSSMAG00000019271	tdrd1	98	47.627	ENSIPUG00000017232	tdrd1	98	48.192	Ictalurus_punctatus
ENSSMAG00000019271	tdrd1	91	33.333	ENSSTOG00000003221	TDRD1	82	34.349	Ictidomys_tridecemlineatus
ENSSMAG00000019271	tdrd1	94	32.938	ENSJJAG00000014720	Tdrd1	84	33.752	Jaculus_jaculus
ENSSMAG00000019271	tdrd1	87	64.759	ENSKMAG00000018558	tdrd1	93	64.759	Kryptolebias_marmoratus
ENSSMAG00000019271	tdrd1	97	67.867	ENSLBEG00000004161	tdrd1	94	68.074	Labrus_bergylta
ENSSMAG00000019271	tdrd1	87	33.925	ENSLACG00000011559	TDRD1	84	33.529	Latimeria_chalumnae
ENSSMAG00000019271	tdrd1	99	39.261	ENSLOCG00000012030	tdrd1	100	42.020	Lepisosteus_oculatus
ENSSMAG00000019271	tdrd1	77	34.628	ENSLAFG00000011575	TDRD1	92	34.735	Loxodonta_africana
ENSSMAG00000019271	tdrd1	88	35.647	ENSMFAG00000043487	TDRD1	81	35.647	Macaca_fascicularis
ENSSMAG00000019271	tdrd1	88	35.647	ENSMMUG00000022517	TDRD1	81	35.647	Macaca_mulatta
ENSSMAG00000019271	tdrd1	88	35.542	ENSMNEG00000031108	TDRD1	81	35.542	Macaca_nemestrina
ENSSMAG00000019271	tdrd1	88	35.542	ENSMLEG00000032281	TDRD1	81	35.542	Mandrillus_leucophaeus
ENSSMAG00000019271	tdrd1	98	70.432	ENSMAMG00000015287	tdrd1	97	71.091	Mastacembelus_armatus
ENSSMAG00000019271	tdrd1	97	64.643	ENSMZEG00005025315	tdrd1	91	65.725	Maylandia_zebra
ENSSMAG00000019271	tdrd1	88	31.184	ENSMGAG00000011067	TDRD1	99	32.329	Meleagris_gallopavo
ENSSMAG00000019271	tdrd1	84	35.853	ENSMAUG00000012164	Tdrd1	79	35.853	Mesocricetus_auratus
ENSSMAG00000019271	tdrd1	87	34.995	ENSMICG00000016190	TDRD1	82	34.211	Microcebus_murinus
ENSSMAG00000019271	tdrd1	88	33.754	ENSMOCG00000022360	Tdrd1	84	33.948	Microtus_ochrogaster
ENSSMAG00000019271	tdrd1	98	61.492	ENSMMOG00000014068	tdrd1	93	64.037	Mola_mola
ENSSMAG00000019271	tdrd1	93	32.348	ENSMODG00000009788	TDRD1	82	33.499	Monodelphis_domestica
ENSSMAG00000019271	tdrd1	98	66.581	ENSMALG00000022115	tdrd1	93	70.893	Monopterus_albus
ENSSMAG00000019271	tdrd1	88	34.442	MGP_CAROLIEiJ_G0023095	Tdrd1	83	34.540	Mus_caroli
ENSSMAG00000019271	tdrd1	88	34.344	ENSMUSG00000025081	Tdrd1	83	34.442	Mus_musculus
ENSSMAG00000019271	tdrd1	88	33.822	MGP_PahariEiJ_G0014583	Tdrd1	85	33.776	Mus_pahari
ENSSMAG00000019271	tdrd1	88	34.344	MGP_SPRETEiJ_G0024016	Tdrd1	83	34.442	Mus_spretus
ENSSMAG00000019271	tdrd1	88	31.992	ENSMPUG00000001987	TDRD1	83	31.992	Mustela_putorius_furo
ENSSMAG00000019271	tdrd1	88	34.177	ENSNGAG00000015231	Tdrd1	83	34.177	Nannospalax_galili
ENSSMAG00000019271	tdrd1	99	63.487	ENSNBRG00000017920	tdrd1	99	63.487	Neolamprologus_brichardi
ENSSMAG00000019271	tdrd1	92	32.897	ENSNLEG00000016228	TDRD1	83	33.301	Nomascus_leucogenys
ENSSMAG00000019271	tdrd1	85	31.400	ENSMEUG00000007717	TDRD1	80	31.400	Notamacropus_eugenii
ENSSMAG00000019271	tdrd1	93	34.349	ENSOPRG00000009180	TDRD1	83	34.859	Ochotona_princeps
ENSSMAG00000019271	tdrd1	90	33.428	ENSODEG00000011965	TDRD1	81	33.769	Octodon_degus
ENSSMAG00000019271	tdrd1	95	65.845	ENSONIG00000016382	tdrd1	94	65.325	Oreochromis_niloticus
ENSSMAG00000019271	tdrd1	86	34.650	ENSOANG00000001562	TDRD1	84	34.650	Ornithorhynchus_anatinus
ENSSMAG00000019271	tdrd1	88	34.600	ENSOCUG00000025327	TDRD1	84	34.600	Oryctolagus_cuniculus
ENSSMAG00000019271	tdrd1	98	54.449	ENSORLG00000004833	tdrd1	96	55.126	Oryzias_latipes
ENSSMAG00000019271	tdrd1	98	55.035	ENSORLG00020019231	tdrd1	95	57.522	Oryzias_latipes_hni
ENSSMAG00000019271	tdrd1	98	53.667	ENSORLG00015017184	tdrd1	95	54.995	Oryzias_latipes_hsok
ENSSMAG00000019271	tdrd1	97	55.546	ENSOMEG00000023637	tdrd1	93	55.546	Oryzias_melastigma
ENSSMAG00000019271	tdrd1	88	34.646	ENSOGAG00000001370	TDRD1	82	34.646	Otolemur_garnettii
ENSSMAG00000019271	tdrd1	90	35.086	ENSOARG00000014200	-	84	35.182	Ovis_aries
ENSSMAG00000019271	tdrd1	88	34.221	ENSPPAG00000041621	TDRD1	82	34.221	Pan_paniscus
ENSSMAG00000019271	tdrd1	92	32.348	ENSPPRG00000000191	TDRD1	81	33.853	Panthera_pardus
ENSSMAG00000019271	tdrd1	88	34.098	ENSPTIG00000010264	TDRD1	82	34.202	Panthera_tigris_altaica
ENSSMAG00000019271	tdrd1	88	34.221	ENSPTRG00000002958	TDRD1	82	34.221	Pan_troglodytes
ENSSMAG00000019271	tdrd1	88	35.436	ENSPANG00000020752	TDRD1	84	34.783	Papio_anubis
ENSSMAG00000019271	tdrd1	89	42.717	ENSPKIG00000010586	tdrd1	89	42.689	Paramormyrops_kingsleyae
ENSSMAG00000019271	tdrd1	85	33.799	ENSPSIG00000014655	TDRD1	79	33.799	Pelodiscus_sinensis
ENSSMAG00000019271	tdrd1	88	50.328	ENSPMGG00000018890	tdrd1	100	51.155	Periophthalmus_magnuspinnatus
ENSSMAG00000019271	tdrd1	93	34.584	ENSPEMG00000004582	Tdrd1	84	34.908	Peromyscus_maniculatus_bairdii
ENSSMAG00000019271	tdrd1	94	33.658	ENSPCIG00000009739	TDRD1	88	33.613	Phascolarctos_cinereus
ENSSMAG00000019271	tdrd1	90	55.160	ENSPFOG00000002145	tdrd1	92	57.738	Poecilia_formosa
ENSSMAG00000019271	tdrd1	98	55.377	ENSPLAG00000010241	tdrd1	90	58.543	Poecilia_latipinna
ENSSMAG00000019271	tdrd1	98	55.314	ENSPMEG00000021893	tdrd1	99	55.314	Poecilia_mexicana
ENSSMAG00000019271	tdrd1	98	55.196	ENSPREG00000022663	tdrd1	90	58.077	Poecilia_reticulata
ENSSMAG00000019271	tdrd1	88	33.464	ENSPPYG00000002671	TDRD1	83	33.464	Pongo_abelii
ENSSMAG00000019271	tdrd1	90	32.513	ENSPCAG00000006692	TDRD1	71	32.807	Procavia_capensis
ENSSMAG00000019271	tdrd1	97	32.435	ENSPCOG00000026619	TDRD1	82	35.177	Propithecus_coquereli
ENSSMAG00000019271	tdrd1	88	33.107	ENSPVAG00000003055	TDRD1	82	33.107	Pteropus_vampyrus
ENSSMAG00000019271	tdrd1	98	61.682	ENSPNYG00000001706	tdrd1	99	61.682	Pundamilia_nyererei
ENSSMAG00000019271	tdrd1	96	47.170	ENSPNAG00000005831	tdrd1	96	47.170	Pygocentrus_nattereri
ENSSMAG00000019271	tdrd1	88	34.446	ENSRNOG00000017064	Tdrd1	83	34.446	Rattus_norvegicus
ENSSMAG00000019271	tdrd1	89	35.460	ENSRBIG00000029668	TDRD1	84	35.460	Rhinopithecus_bieti
ENSSMAG00000019271	tdrd1	89	35.423	ENSRROG00000043379	TDRD1	81	35.423	Rhinopithecus_roxellana
ENSSMAG00000019271	tdrd1	87	34.700	ENSSBOG00000023561	TDRD1	81	34.700	Saimiri_boliviensis_boliviensis
ENSSMAG00000019271	tdrd1	97	32.121	ENSSHAG00000014311	TDRD1	82	33.764	Sarcophilus_harrisii
ENSSMAG00000019271	tdrd1	89	41.409	ENSSFOG00015022020	tdrd1	96	41.409	Scleropages_formosus
ENSSMAG00000019271	tdrd1	97	75.451	ENSSDUG00000022012	tdrd1	98	75.542	Seriola_dumerili
ENSSMAG00000019271	tdrd1	97	75.000	ENSSLDG00000006423	tdrd1	99	75.090	Seriola_lalandi_dorsalis
ENSSMAG00000019271	tdrd1	91	35.413	ENSSARG00000008828	TDRD1	64	35.413	Sorex_araneus
ENSSMAG00000019271	tdrd1	87	32.277	ENSSPUG00000005015	TDRD1	85	32.277	Sphenodon_punctatus
ENSSMAG00000019271	tdrd1	98	65.013	ENSSPAG00000018805	tdrd1	95	65.081	Stegastes_partitus
ENSSMAG00000019271	tdrd1	92	33.082	ENSSSCG00000021075	TDRD1	82	33.499	Sus_scrofa
ENSSMAG00000019271	tdrd1	80	34.068	ENSTGUG00000010905	TDRD1	93	34.214	Taeniopygia_guttata
ENSSMAG00000019271	tdrd1	94	56.037	ENSTRUG00000012142	tdrd1	100	57.228	Takifugu_rubripes
ENSSMAG00000019271	tdrd1	82	57.614	ENSTNIG00000018898	tdrd1	100	57.614	Tetraodon_nigroviridis
ENSSMAG00000019271	tdrd1	91	36.634	ENSTBEG00000014417	-	77	35.765	Tupaia_belangeri
ENSSMAG00000019271	tdrd1	91	32.264	ENSTTRG00000010147	TDRD1	81	32.873	Tursiops_truncatus
ENSSMAG00000019271	tdrd1	87	34.648	ENSUAMG00000009025	TDRD1	80	34.648	Ursus_americanus
ENSSMAG00000019271	tdrd1	87	34.947	ENSUMAG00000000705	TDRD1	81	34.947	Ursus_maritimus
ENSSMAG00000019271	tdrd1	85	34.040	ENSVPAG00000004000	TDRD1	80	34.006	Vicugna_pacos
ENSSMAG00000019271	tdrd1	91	32.365	ENSVVUG00000009750	TDRD1	82	33.465	Vulpes_vulpes
ENSSMAG00000019271	tdrd1	85	58.239	ENSXCOG00000006412	tdrd1	99	58.352	Xiphophorus_couchianus
ENSSMAG00000019271	tdrd1	98	57.243	ENSXMAG00000008104	tdrd1	100	58.002	Xiphophorus_maculatus