EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019288 (Gene tree)
Gene ID: -
Gene Symbol: ddx43
Alias: zgc:174910
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 14096 bases
Position: chr15:17395001-17409096
Accession: ZDB-GENE-080204-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000031469	KH_1	PF00013.29	3.4e-14	1	1
ENSSMAP00000031486	KH_1	PF00013.29	3.5e-14	1	1
ENSSMAP00000031469	DEAD	PF00270.29	1.1e-42	1	1
ENSSMAP00000031486	DEAD	PF00270.29	1.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000031872	-	7167	-	ENSSMAP00000031486	771 (aa)	-	-
ENSSMAT00000031855	-	7573	-	ENSSMAP00000031469	729 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000019288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019288	ddx43	60	43.736	ENSSMAG00000005509	DDX17	66	43.736
ENSSMAG00000019288	ddx43	51	30.343	ENSSMAG00000016567	ddx39aa	86	30.343
ENSSMAG00000019288	ddx43	66	42.536	ENSSMAG00000017903	DDX5	69	43.736
ENSSMAG00000019288	ddx43	53	35.128	ENSSMAG00000021230	ddx59	60	35.171
ENSSMAG00000019288	ddx43	60	44.875	ENSSMAG00000003994	ddx5	86	44.875
ENSSMAG00000019288	ddx43	55	35.961	ENSSMAG00000004179	ddx47	76	36.364
ENSSMAG00000019288	ddx43	59	43.151	ENSSMAG00000007794	si:dkey-156n14.5	71	40.748
ENSSMAG00000019288	ddx43	55	31.429	ENSSMAG00000009788	ddx52	59	31.707
ENSSMAG00000019288	ddx43	50	41.205	ENSSMAG00000000529	ddx23	55	41.205
ENSSMAG00000019288	ddx43	56	39.573	ENSSMAG00000007208	DDX41	64	40.152
ENSSMAG00000019288	ddx43	59	39.073	ENSSMAG00000012135	-	61	38.616
ENSSMAG00000019288	ddx43	60	40.179	ENSSMAG00000015674	-	70	41.148
ENSSMAG00000019288	ddx43	66	37.681	ENSSMAG00000009077	ddx42	57	38.851
ENSSMAG00000019288	ddx43	57	30.189	ENSSMAG00000017673	ddx31	59	30.189
ENSSMAG00000019288	ddx43	51	30.728	ENSSMAG00000021078	eif4a3	86	32.958
ENSSMAG00000019288	ddx43	50	34.066	ENSSMAG00000008350	eif4a2	88	33.967
ENSSMAG00000019288	ddx43	52	38.918	ENSSMAG00000009800	ddx4	61	38.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019288	ddx43	95	73.975	ENSAPOG00000001712	ddx43	94	74.079	Acanthochromis_polyacanthus
ENSSMAG00000019288	ddx43	95	63.948	ENSACIG00000012170	ddx43	95	63.571	Amphilophus_citrinellus
ENSSMAG00000019288	ddx43	95	78.684	ENSAOCG00000001331	ddx43	93	78.684	Amphiprion_ocellaris
ENSSMAG00000019288	ddx43	95	78.143	ENSAPEG00000001133	ddx43	92	78.143	Amphiprion_percula
ENSSMAG00000019288	ddx43	95	79.598	ENSATEG00000012664	ddx43	100	78.718	Anabas_testudineus
ENSSMAG00000019288	ddx43	77	66.785	ENSAPLG00000010182	-	96	73.276	Anas_platyrhynchos
ENSSMAG00000019288	ddx43	80	65.470	ENSACAG00000004387	-	98	58.512	Anolis_carolinensis
ENSSMAG00000019288	ddx43	95	75.179	ENSACLG00000026081	ddx43	97	74.462	Astatotilapia_calliptera
ENSSMAG00000019288	ddx43	95	69.004	ENSAMXG00000004457	ddx43	93	70.487	Astyanax_mexicanus
ENSSMAG00000019288	ddx43	61	48.908	WBGene00013214	Y54G11A.3	90	48.908	Caenorhabditis_elegans
ENSSMAG00000019288	ddx43	59	61.379	ENSCSEG00000000532	ddx43	98	62.529	Cynoglossus_semilaevis
ENSSMAG00000019288	ddx43	88	66.303	ENSCVAG00000009980	ddx43	93	66.303	Cyprinodon_variegatus
ENSSMAG00000019288	ddx43	95	68.466	ENSDARG00000022614	ddx43	93	68.803	Danio_rerio
ENSSMAG00000019288	ddx43	88	47.328	FBgn0037549	CG7878	83	49.488	Drosophila_melanogaster
ENSSMAG00000019288	ddx43	71	44.808	ENSETEG00000014626	-	97	43.985	Echinops_telfairi
ENSSMAG00000019288	ddx43	57	47.368	ENSETEG00000019547	-	71	45.560	Echinops_telfairi
ENSSMAG00000019288	ddx43	95	67.816	ENSELUG00000012126	ddx43	96	67.096	Esox_lucius
ENSSMAG00000019288	ddx43	84	62.019	ENSFALG00000007042	-	89	62.927	Ficedula_albicollis
ENSSMAG00000019288	ddx43	50	53.619	ENSFHEG00000008109	-	87	57.485	Fundulus_heteroclitus
ENSSMAG00000019288	ddx43	71	83.048	ENSFHEG00000011226	ddx43	95	83.048	Fundulus_heteroclitus
ENSSMAG00000019288	ddx43	62	79.167	ENSGMOG00000004178	ddx43	99	79.167	Gadus_morhua
ENSSMAG00000019288	ddx43	59	72.414	ENSGALG00000015928	-	97	73.068	Gallus_gallus
ENSSMAG00000019288	ddx43	95	70.638	ENSGAFG00000012622	ddx43	96	71.368	Gambusia_affinis
ENSSMAG00000019288	ddx43	78	83.392	ENSGACG00000012072	ddx43	97	82.986	Gasterosteus_aculeatus
ENSSMAG00000019288	ddx43	80	61.969	ENSGAGG00000025230	-	82	62.199	Gopherus_agassizii
ENSSMAG00000019288	ddx43	95	74.642	ENSHBUG00000011653	ddx43	97	74.319	Haplochromis_burtoni
ENSSMAG00000019288	ddx43	95	69.030	ENSHCOG00000014704	ddx43	96	69.320	Hippocampus_comes
ENSSMAG00000019288	ddx43	98	67.500	ENSIPUG00000023423	ddx43	96	68.633	Ictalurus_punctatus
ENSSMAG00000019288	ddx43	95	74.644	ENSKMAG00000016167	ddx43	96	74.465	Kryptolebias_marmoratus
ENSSMAG00000019288	ddx43	95	77.954	ENSLBEG00000007913	ddx43	96	77.762	Labrus_bergylta
ENSSMAG00000019288	ddx43	67	68.635	ENSLACG00000000741	ddx43	100	68.635	Latimeria_chalumnae
ENSSMAG00000019288	ddx43	82	71.476	ENSLOCG00000016170	ddx43	88	71.476	Lepisosteus_oculatus
ENSSMAG00000019288	ddx43	95	72.006	ENSMAMG00000022128	ddx43	95	71.264	Mastacembelus_armatus
ENSSMAG00000019288	ddx43	95	75.179	ENSMZEG00005027349	ddx43	97	74.462	Maylandia_zebra
ENSSMAG00000019288	ddx43	79	63.979	ENSMGAG00000013832	-	97	64.348	Meleagris_gallopavo
ENSSMAG00000019288	ddx43	100	72.442	ENSMMOG00000007346	ddx43	95	73.132	Mola_mola
ENSSMAG00000019288	ddx43	81	53.445	ENSMODG00000014335	-	99	53.445	Monodelphis_domestica
ENSSMAG00000019288	ddx43	81	60.504	ENSMODG00000018546	-	90	60.267	Monodelphis_domestica
ENSSMAG00000019288	ddx43	95	74.750	ENSMALG00000020673	ddx43	100	73.541	Monopterus_albus
ENSSMAG00000019288	ddx43	95	74.605	ENSNBRG00000010942	ddx43	97	74.106	Neolamprologus_brichardi
ENSSMAG00000019288	ddx43	95	75.501	ENSONIG00000001195	ddx43	99	73.957	Oreochromis_niloticus
ENSSMAG00000019288	ddx43	52	65.375	ENSOANG00000006467	-	100	64.070	Ornithorhynchus_anatinus
ENSSMAG00000019288	ddx43	81	81.513	ENSORLG00000002267	ddx43	91	81.407	Oryzias_latipes
ENSSMAG00000019288	ddx43	81	81.513	ENSORLG00020018592	ddx43	92	81.376	Oryzias_latipes_hni
ENSSMAG00000019288	ddx43	81	81.176	ENSORLG00015004854	ddx43	91	81.072	Oryzias_latipes_hsok
ENSSMAG00000019288	ddx43	81	80.203	ENSOMEG00000023418	ddx43	91	80.203	Oryzias_melastigma
ENSSMAG00000019288	ddx43	95	63.702	ENSPKIG00000002941	ddx43	81	71.478	Paramormyrops_kingsleyae
ENSSMAG00000019288	ddx43	76	67.993	ENSPSIG00000002202	-	89	66.034	Pelodiscus_sinensis
ENSSMAG00000019288	ddx43	56	62.228	ENSPMGG00000019854	ddx43	91	62.530	Periophthalmus_magnuspinnatus
ENSSMAG00000019288	ddx43	81	52.174	ENSPCIG00000002492	-	94	52.174	Phascolarctos_cinereus
ENSSMAG00000019288	ddx43	59	70.258	ENSPCIG00000017981	-	96	70.258	Phascolarctos_cinereus
ENSSMAG00000019288	ddx43	80	80.711	ENSPFOG00000004241	ddx43	96	72.057	Poecilia_formosa
ENSSMAG00000019288	ddx43	80	80.880	ENSPLAG00000023362	ddx43	96	72.057	Poecilia_latipinna
ENSSMAG00000019288	ddx43	95	72.286	ENSPMEG00000004870	ddx43	96	71.977	Poecilia_mexicana
ENSSMAG00000019288	ddx43	80	73.175	ENSPREG00000000923	ddx43	96	65.903	Poecilia_reticulata
ENSSMAG00000019288	ddx43	95	69.099	ENSPNYG00000009064	ddx43	96	68.625	Pundamilia_nyererei
ENSSMAG00000019288	ddx43	95	69.628	ENSPNAG00000001232	ddx43	93	69.628	Pygocentrus_nattereri
ENSSMAG00000019288	ddx43	79	60.976	ENSSHAG00000001847	-	92	59.766	Sarcophilus_harrisii
ENSSMAG00000019288	ddx43	79	56.446	ENSSHAG00000016933	-	97	56.446	Sarcophilus_harrisii
ENSSMAG00000019288	ddx43	84	63.850	ENSSFOG00015012193	ddx43	89	67.986	Scleropages_formosus
ENSSMAG00000019288	ddx43	95	81.492	ENSSDUG00000020120	ddx43	95	81.948	Seriola_dumerili
ENSSMAG00000019288	ddx43	95	78.112	ENSSLDG00000017225	ddx43	93	78.080	Seriola_lalandi_dorsalis
ENSSMAG00000019288	ddx43	65	62.343	ENSSPUG00000018097	-	97	62.605	Sphenodon_punctatus
ENSSMAG00000019288	ddx43	100	79.536	ENSSPAG00000006858	ddx43	100	80.355	Stegastes_partitus
ENSSMAG00000019288	ddx43	81	63.087	ENSTGUG00000012684	-	97	63.328	Taeniopygia_guttata
ENSSMAG00000019288	ddx43	78	70.035	ENSTRUG00000012795	ddx43	83	70.035	Takifugu_rubripes
ENSSMAG00000019288	ddx43	80	73.720	ENSTNIG00000009822	ddx43	96	75.088	Tetraodon_nigroviridis
ENSSMAG00000019288	ddx43	95	59.045	ENSXETG00000011767	ddx43	98	58.250	Xenopus_tropicalis
ENSSMAG00000019288	ddx43	95	67.385	ENSXCOG00000013810	ddx43	96	67.098	Xiphophorus_couchianus
ENSSMAG00000019288	ddx43	95	71.184	ENSXMAG00000017126	ddx43	96	71.184	Xiphophorus_maculatus