EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019377 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 10548 bases
Position: chr12:20022545-20033092
Accession: ZDB-GENE-040426-892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000031690	ResIII	PF04851.15	2.5e-10	1	1
ENSSMAP00000031664	ResIII	PF04851.15	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000032052	-	3572	-	ENSSMAP00000031664	1030 (aa)	-	-
ENSSMAT00000032077	-	2694	-	ENSSMAP00000031690	897 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000019377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019377	chd1l	60	41.058	ENSSMAG00000004801	smarca5	52	41.058
ENSSMAG00000019377	chd1l	56	42.424	ENSSMAG00000017423	hells	69	42.424
ENSSMAG00000019377	chd1l	50	32.465	ENSSMAG00000018659	rad54b	58	33.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019377	chd1l	98	59.865	ENSG00000131778	CHD1L	99	61.111	Homo_sapiens
ENSSMAG00000019377	chd1l	97	83.030	ENSAPOG00000001539	chd1l	99	84.265	Acanthochromis_polyacanthus
ENSSMAG00000019377	chd1l	97	60.497	ENSAMEG00000017063	CHD1L	99	60.687	Ailuropoda_melanoleuca
ENSSMAG00000019377	chd1l	94	81.404	ENSACIG00000001164	chd1l	99	82.139	Amphilophus_citrinellus
ENSSMAG00000019377	chd1l	100	81.068	ENSAOCG00000014510	chd1l	100	81.262	Amphiprion_ocellaris
ENSSMAG00000019377	chd1l	96	80.069	ENSAPEG00000017450	chd1l	95	81.164	Amphiprion_percula
ENSSMAG00000019377	chd1l	98	79.190	ENSAPEG00000017573	chd1l	97	79.190	Amphiprion_percula
ENSSMAG00000019377	chd1l	100	81.977	ENSATEG00000013058	chd1l	100	82.461	Anabas_testudineus
ENSSMAG00000019377	chd1l	93	60.638	ENSAPLG00000009976	CHD1L	96	60.137	Anas_platyrhynchos
ENSSMAG00000019377	chd1l	96	58.269	ENSACAG00000017686	CHD1L	99	57.821	Anolis_carolinensis
ENSSMAG00000019377	chd1l	99	59.354	ENSANAG00000024347	CHD1L	98	59.715	Aotus_nancymaae
ENSSMAG00000019377	chd1l	96	81.651	ENSACLG00000019304	chd1l	96	81.335	Astatotilapia_calliptera
ENSSMAG00000019377	chd1l	100	59.266	ENSAMXG00000012367	chd1l	100	58.784	Astyanax_mexicanus
ENSSMAG00000019377	chd1l	97	61.268	ENSBTAG00000020831	CHD1L	98	61.173	Bos_taurus
ENSSMAG00000019377	chd1l	98	59.618	ENSCJAG00000002406	CHD1L	98	60.133	Callithrix_jacchus
ENSSMAG00000019377	chd1l	98	57.576	ENSCAFG00000010944	CHD1L	98	57.731	Canis_familiaris
ENSSMAG00000019377	chd1l	97	59.347	ENSCAFG00020020121	CHD1L	99	59.622	Canis_lupus_dingo
ENSSMAG00000019377	chd1l	97	61.155	ENSCHIG00000013871	CHD1L	99	61.283	Capra_hircus
ENSSMAG00000019377	chd1l	93	60.613	ENSTSYG00000003005	CHD1L	100	60.665	Carlito_syrichta
ENSSMAG00000019377	chd1l	94	59.371	ENSCPOG00000009000	CHD1L	97	59.280	Cavia_porcellus
ENSSMAG00000019377	chd1l	97	57.723	ENSCCAG00000036079	CHD1L	98	58.250	Cebus_capucinus
ENSSMAG00000019377	chd1l	98	59.752	ENSCATG00000031044	CHD1L	98	59.309	Cercocebus_atys
ENSSMAG00000019377	chd1l	94	61.565	ENSCLAG00000000880	CHD1L	98	61.261	Chinchilla_lanigera
ENSSMAG00000019377	chd1l	98	59.865	ENSCSAG00000018386	CHD1L	98	59.420	Chlorocebus_sabaeus
ENSSMAG00000019377	chd1l	94	62.295	ENSCPBG00000002600	CHD1L	98	61.964	Chrysemys_picta_bellii
ENSSMAG00000019377	chd1l	99	58.528	ENSCANG00000020239	CHD1L	98	58.417	Colobus_angolensis_palliatus
ENSSMAG00000019377	chd1l	94	61.449	ENSCGRG00001021624	Chd1l	98	60.860	Cricetulus_griseus_chok1gshd
ENSSMAG00000019377	chd1l	92	61.796	ENSCGRG00000007554	Chd1l	100	61.182	Cricetulus_griseus_crigri
ENSSMAG00000019377	chd1l	97	77.257	ENSCVAG00000002595	chd1l	97	76.269	Cyprinodon_variegatus
ENSSMAG00000019377	chd1l	96	70.447	ENSDARG00000015471	chd1l	99	67.050	Danio_rerio
ENSSMAG00000019377	chd1l	97	60.497	ENSDNOG00000019504	CHD1L	96	61.652	Dasypus_novemcinctus
ENSSMAG00000019377	chd1l	96	59.389	ENSDORG00000013555	Chd1l	98	60.266	Dipodomys_ordii
ENSSMAG00000019377	chd1l	87	56.530	ENSETEG00000008445	CHD1L	89	57.461	Echinops_telfairi
ENSSMAG00000019377	chd1l	71	79.070	ENSEBUG00000005791	chd1l	73	79.070	Eptatretus_burgeri
ENSSMAG00000019377	chd1l	96	60.616	ENSEASG00005007364	CHD1L	100	61.091	Equus_asinus_asinus
ENSSMAG00000019377	chd1l	97	60.136	ENSECAG00000008915	CHD1L	100	60.973	Equus_caballus
ENSSMAG00000019377	chd1l	100	59.714	ENSELUG00000016844	chd1l	99	60.000	Esox_lucius
ENSSMAG00000019377	chd1l	96	59.909	ENSFCAG00000007777	CHD1L	99	59.626	Felis_catus
ENSSMAG00000019377	chd1l	97	58.804	ENSFALG00000006087	CHD1L	98	58.545	Ficedula_albicollis
ENSSMAG00000019377	chd1l	92	61.621	ENSFDAG00000012431	CHD1L	99	61.751	Fukomys_damarensis
ENSSMAG00000019377	chd1l	99	76.176	ENSFHEG00000012420	chd1l	100	75.980	Fundulus_heteroclitus
ENSSMAG00000019377	chd1l	94	60.890	ENSGALG00000015038	CHD1L	99	59.823	Gallus_gallus
ENSSMAG00000019377	chd1l	99	75.825	ENSGAFG00000018198	chd1l	100	76.186	Gambusia_affinis
ENSSMAG00000019377	chd1l	56	82.583	ENSGACG00000014042	chd1l	98	84.932	Gasterosteus_aculeatus
ENSSMAG00000019377	chd1l	96	61.460	ENSGAGG00000014432	CHD1L	99	61.791	Gopherus_agassizii
ENSSMAG00000019377	chd1l	99	59.086	ENSGGOG00000001067	CHD1L	98	59.556	Gorilla_gorilla
ENSSMAG00000019377	chd1l	96	81.766	ENSHBUG00000007464	chd1l	98	81.356	Haplochromis_burtoni
ENSSMAG00000019377	chd1l	94	60.093	ENSHGLG00000008933	CHD1L	97	60.203	Heterocephalus_glaber_female
ENSSMAG00000019377	chd1l	92	58.760	ENSHGLG00100007155	CHD1L	99	58.966	Heterocephalus_glaber_male
ENSSMAG00000019377	chd1l	94	74.175	ENSHCOG00000012787	chd1l	92	74.737	Hippocampus_comes
ENSSMAG00000019377	chd1l	97	65.564	ENSIPUG00000022617	chd1l	100	62.500	Ictalurus_punctatus
ENSSMAG00000019377	chd1l	97	55.079	ENSSTOG00000007032	CHD1L	97	56.404	Ictidomys_tridecemlineatus
ENSSMAG00000019377	chd1l	100	77.282	ENSKMAG00000014358	chd1l	100	77.767	Kryptolebias_marmoratus
ENSSMAG00000019377	chd1l	100	80.154	ENSLBEG00000023845	chd1l	100	80.443	Labrus_bergylta
ENSSMAG00000019377	chd1l	99	55.801	ENSLACG00000006262	CHD1L	99	55.566	Latimeria_chalumnae
ENSSMAG00000019377	chd1l	96	68.736	ENSLOCG00000010574	chd1l	99	66.148	Lepisosteus_oculatus
ENSSMAG00000019377	chd1l	92	60.449	ENSLAFG00000018136	CHD1L	99	60.341	Loxodonta_africana
ENSSMAG00000019377	chd1l	93	60.617	ENSMFAG00000043562	CHD1L	99	60.501	Macaca_fascicularis
ENSSMAG00000019377	chd1l	98	59.752	ENSMMUG00000009024	CHD1L	98	59.309	Macaca_mulatta
ENSSMAG00000019377	chd1l	98	59.752	ENSMNEG00000039905	CHD1L	98	59.309	Macaca_nemestrina
ENSSMAG00000019377	chd1l	98	59.865	ENSMLEG00000030900	CHD1L	98	59.420	Mandrillus_leucophaeus
ENSSMAG00000019377	chd1l	100	81.528	ENSMAMG00000012822	chd1l	100	82.698	Mastacembelus_armatus
ENSSMAG00000019377	chd1l	96	81.766	ENSMZEG00005020830	chd1l	95	81.224	Maylandia_zebra
ENSSMAG00000019377	chd1l	92	61.118	ENSMGAG00000014304	CHD1L	99	60.599	Meleagris_gallopavo
ENSSMAG00000019377	chd1l	98	60.045	ENSMICG00000002497	CHD1L	98	60.444	Microcebus_murinus
ENSSMAG00000019377	chd1l	96	60.568	ENSMOCG00000006305	Chd1l	97	61.573	Microtus_ochrogaster
ENSSMAG00000019377	chd1l	97	74.688	ENSMMOG00000005964	chd1l	91	75.538	Mola_mola
ENSSMAG00000019377	chd1l	96	61.003	ENSMODG00000018717	CHD1L	99	60.532	Monodelphis_domestica
ENSSMAG00000019377	chd1l	99	82.702	ENSMALG00000014675	chd1l	99	83.285	Monopterus_albus
ENSSMAG00000019377	chd1l	94	61.170	MGP_CAROLIEiJ_G0025401	Chd1l	97	61.808	Mus_caroli
ENSSMAG00000019377	chd1l	94	61.253	ENSMUSG00000028089	Chd1l	97	61.695	Mus_musculus
ENSSMAG00000019377	chd1l	96	60.274	MGP_PahariEiJ_G0026845	Chd1l	97	61.443	Mus_pahari
ENSSMAG00000019377	chd1l	94	61.287	MGP_SPRETEiJ_G0026347	Chd1l	97	61.695	Mus_spretus
ENSSMAG00000019377	chd1l	97	60.181	ENSMPUG00000000615	CHD1L	98	60.289	Mustela_putorius_furo
ENSSMAG00000019377	chd1l	97	59.572	ENSMLUG00000007573	CHD1L	97	59.934	Myotis_lucifugus
ENSSMAG00000019377	chd1l	93	58.893	ENSNGAG00000000908	Chd1l	98	57.853	Nannospalax_galili
ENSSMAG00000019377	chd1l	96	77.993	ENSNBRG00000006021	chd1l	95	79.115	Neolamprologus_brichardi
ENSSMAG00000019377	chd1l	98	59.932	ENSNLEG00000000179	CHD1L	98	59.819	Nomascus_leucogenys
ENSSMAG00000019377	chd1l	92	51.830	ENSOPRG00000006973	CHD1L	94	62.157	Ochotona_princeps
ENSSMAG00000019377	chd1l	94	58.226	ENSODEG00000002494	CHD1L	98	58.671	Octodon_degus
ENSSMAG00000019377	chd1l	100	80.483	ENSONIG00000003183	chd1l	100	80.580	Oreochromis_niloticus
ENSSMAG00000019377	chd1l	85	58.069	ENSOANG00000003068	CHD1L	93	58.660	Ornithorhynchus_anatinus
ENSSMAG00000019377	chd1l	98	56.450	ENSOCUG00000009336	CHD1L	96	57.271	Oryctolagus_cuniculus
ENSSMAG00000019377	chd1l	97	74.886	ENSORLG00000003673	chd1l	97	74.693	Oryzias_latipes
ENSSMAG00000019377	chd1l	96	76.376	ENSORLG00020005123	chd1l	99	77.841	Oryzias_latipes_hni
ENSSMAG00000019377	chd1l	96	75.803	ENSORLG00015001680	chd1l	99	75.366	Oryzias_latipes_hsok
ENSSMAG00000019377	chd1l	81	77.419	ENSOMEG00000006109	chd1l	96	77.419	Oryzias_melastigma
ENSSMAG00000019377	chd1l	97	59.163	ENSOGAG00000008775	CHD1L	96	60.339	Otolemur_garnettii
ENSSMAG00000019377	chd1l	97	61.042	ENSOARG00000020547	CHD1L	99	61.688	Ovis_aries
ENSSMAG00000019377	chd1l	96	60.069	ENSPPAG00000039193	CHD1L	99	61.098	Pan_paniscus
ENSSMAG00000019377	chd1l	96	60.364	ENSPPRG00000010258	CHD1L	98	60.044	Panthera_pardus
ENSSMAG00000019377	chd1l	99	59.598	ENSPTRG00000001220	CHD1L	98	60.245	Pan_troglodytes
ENSSMAG00000019377	chd1l	98	59.977	ENSPANG00000009170	CHD1L	98	60.022	Papio_anubis
ENSSMAG00000019377	chd1l	97	68.927	ENSPKIG00000022166	chd1l	99	66.828	Paramormyrops_kingsleyae
ENSSMAG00000019377	chd1l	95	61.601	ENSPSIG00000012595	CHD1L	97	60.957	Pelodiscus_sinensis
ENSSMAG00000019377	chd1l	94	60.627	ENSPEMG00000013528	Chd1l	97	59.888	Peromyscus_maniculatus_bairdii
ENSSMAG00000019377	chd1l	89	62.269	ENSPCIG00000030409	CHD1L	100	61.210	Phascolarctos_cinereus
ENSSMAG00000019377	chd1l	99	75.315	ENSPFOG00000015948	chd1l	100	75.218	Poecilia_formosa
ENSSMAG00000019377	chd1l	99	76.140	ENSPLAG00000015145	chd1l	100	76.237	Poecilia_latipinna
ENSSMAG00000019377	chd1l	96	77.100	ENSPMEG00000008720	chd1l	99	76.660	Poecilia_mexicana
ENSSMAG00000019377	chd1l	97	75.941	ENSPREG00000017885	chd1l	98	77.474	Poecilia_reticulata
ENSSMAG00000019377	chd1l	97	59.932	ENSPPYG00000000946	CHD1L	98	60.178	Pongo_abelii
ENSSMAG00000019377	chd1l	89	54.545	ENSPCAG00000005959	CHD1L	90	54.722	Procavia_capensis
ENSSMAG00000019377	chd1l	92	56.718	ENSPVAG00000006084	CHD1L	99	56.701	Pteropus_vampyrus
ENSSMAG00000019377	chd1l	97	80.496	ENSPNYG00000013001	chd1l	97	81.859	Pundamilia_nyererei
ENSSMAG00000019377	chd1l	97	69.989	ENSPNAG00000011881	chd1l	100	66.794	Pygocentrus_nattereri
ENSSMAG00000019377	chd1l	94	61.672	ENSRNOG00000017669	Chd1l	97	62.247	Rattus_norvegicus
ENSSMAG00000019377	chd1l	99	58.417	ENSRBIG00000041272	CHD1L	98	58.305	Rhinopithecus_bieti
ENSSMAG00000019377	chd1l	98	58.963	ENSRROG00000041354	CHD1L	99	58.698	Rhinopithecus_roxellana
ENSSMAG00000019377	chd1l	96	60.069	ENSSHAG00000017395	CHD1L	99	59.337	Sarcophilus_harrisii
ENSSMAG00000019377	chd1l	96	68.879	ENSSFOG00015003649	chd1l	99	67.308	Scleropages_formosus
ENSSMAG00000019377	chd1l	94	84.806	ENSSDUG00000019831	chd1l	94	85.190	Seriola_dumerili
ENSSMAG00000019377	chd1l	94	84.346	ENSSLDG00000012714	chd1l	95	84.112	Seriola_lalandi_dorsalis
ENSSMAG00000019377	chd1l	94	60.563	ENSSPUG00000016865	CHD1L	98	60.609	Sphenodon_punctatus
ENSSMAG00000019377	chd1l	96	83.659	ENSSPAG00000017653	chd1l	99	82.573	Stegastes_partitus
ENSSMAG00000019377	chd1l	97	58.484	ENSSSCG00000006701	CHD1L	98	58.969	Sus_scrofa
ENSSMAG00000019377	chd1l	94	60.422	ENSTGUG00000013392	-	100	59.707	Taeniopygia_guttata
ENSSMAG00000019377	chd1l	94	66.358	ENSTNIG00000004902	chd1l	99	66.937	Tetraodon_nigroviridis
ENSSMAG00000019377	chd1l	93	58.353	ENSTTRG00000011711	CHD1L	99	58.776	Tursiops_truncatus
ENSSMAG00000019377	chd1l	98	60.112	ENSUAMG00000021991	CHD1L	99	60.626	Ursus_americanus
ENSSMAG00000019377	chd1l	98	60.000	ENSUMAG00000009733	CHD1L	99	60.354	Ursus_maritimus
ENSSMAG00000019377	chd1l	97	59.435	ENSVVUG00000007316	CHD1L	94	59.511	Vulpes_vulpes
ENSSMAG00000019377	chd1l	96	74.742	ENSXCOG00000008336	chd1l	98	72.520	Xiphophorus_couchianus
ENSSMAG00000019377	chd1l	99	75.872	ENSXMAG00000015898	chd1l	100	76.260	Xiphophorus_maculatus