EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000019450 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4937 bases
Position: chr2:14201224-14206160
Accession: ZDB-GENE-050522-540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000031745	tRNA_Me_trans	PF03054.16	7.2e-135	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000032133	-	2791	-	ENSSMAP00000031745	416 (aa)	-	A0A2U9B2F6

Gene Model

Click here to download ENSSMAG00000019450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019450	trmu	99	69.007	ENSG00000100416	TRMU	99	78.571	Homo_sapiens
ENSSMAG00000019450	trmu	100	86.331	ENSAPOG00000014458	trmu	100	86.331	Acanthochromis_polyacanthus
ENSSMAG00000019450	trmu	98	69.608	ENSAMEG00000003319	TRMU	97	69.608	Ailuropoda_melanoleuca
ENSSMAG00000019450	trmu	100	84.856	ENSACIG00000002101	trmu	100	84.856	Amphilophus_citrinellus
ENSSMAG00000019450	trmu	100	87.290	ENSAOCG00000013155	trmu	100	87.290	Amphiprion_ocellaris
ENSSMAG00000019450	trmu	100	87.050	ENSAPEG00000013350	trmu	100	87.050	Amphiprion_percula
ENSSMAG00000019450	trmu	100	85.817	ENSATEG00000007814	trmu	100	85.817	Anabas_testudineus
ENSSMAG00000019450	trmu	91	70.899	ENSAPLG00000016380	TRMU	96	70.899	Anas_platyrhynchos
ENSSMAG00000019450	trmu	95	70.960	ENSACAG00000007720	TRMU	95	70.960	Anolis_carolinensis
ENSSMAG00000019450	trmu	99	69.712	ENSANAG00000038053	TRMU	98	69.712	Aotus_nancymaae
ENSSMAG00000019450	trmu	100	87.260	ENSACLG00000005395	trmu	100	87.260	Astatotilapia_calliptera
ENSSMAG00000019450	trmu	99	77.778	ENSAMXG00000005282	trmu	100	77.778	Astyanax_mexicanus
ENSSMAG00000019450	trmu	99	69.903	ENSBTAG00000005595	TRMU	99	69.903	Bos_taurus
ENSSMAG00000019450	trmu	91	41.688	WBGene00007114	mttu-1	98	41.688	Caenorhabditis_elegans
ENSSMAG00000019450	trmu	99	67.797	ENSCJAG00000000198	TRMU	98	67.797	Callithrix_jacchus
ENSSMAG00000019450	trmu	99	69.586	ENSCAFG00000000779	TRMU	96	69.586	Canis_familiaris
ENSSMAG00000019450	trmu	99	69.586	ENSCAFG00020009184	TRMU	96	69.586	Canis_lupus_dingo
ENSSMAG00000019450	trmu	99	69.417	ENSCHIG00000017074	TRMU	99	69.417	Capra_hircus
ENSSMAG00000019450	trmu	97	70.471	ENSTSYG00000003853	TRMU	96	70.471	Carlito_syrichta
ENSSMAG00000019450	trmu	94	66.259	ENSCAPG00000013034	TRMU	96	66.259	Cavia_aperea
ENSSMAG00000019450	trmu	97	70.617	ENSCPOG00000020780	TRMU	96	70.617	Cavia_porcellus
ENSSMAG00000019450	trmu	99	68.613	ENSCCAG00000021641	TRMU	97	68.613	Cebus_capucinus
ENSSMAG00000019450	trmu	96	69.674	ENSCATG00000032800	TRMU	95	69.674	Cercocebus_atys
ENSSMAG00000019450	trmu	98	70.343	ENSCLAG00000017269	TRMU	97	70.343	Chinchilla_lanigera
ENSSMAG00000019450	trmu	97	69.231	ENSCSAG00000005279	TRMU	96	69.231	Chlorocebus_sabaeus
ENSSMAG00000019450	trmu	89	70.161	ENSCPBG00000011621	TRMU	93	70.161	Chrysemys_picta_bellii
ENSSMAG00000019450	trmu	94	48.092	ENSCING00000019371	-	96	48.092	Ciona_intestinalis
ENSSMAG00000019450	trmu	97	68.983	ENSCANG00000041645	TRMU	96	68.983	Colobus_angolensis_palliatus
ENSSMAG00000019450	trmu	97	68.486	ENSCGRG00001001739	Trmu	96	68.486	Cricetulus_griseus_chok1gshd
ENSSMAG00000019450	trmu	97	62.531	ENSCGRG00000002781	Trmu	96	62.531	Cricetulus_griseus_crigri
ENSSMAG00000019450	trmu	99	81.687	ENSCSEG00000012382	trmu	99	81.687	Cynoglossus_semilaevis
ENSSMAG00000019450	trmu	100	84.375	ENSCVAG00000001366	trmu	100	84.375	Cyprinodon_variegatus
ENSSMAG00000019450	trmu	100	73.558	ENSDARG00000043734	trmu	100	73.558	Danio_rerio
ENSSMAG00000019450	trmu	64	57.463	ENSDNOG00000047245	-	94	57.463	Dasypus_novemcinctus
ENSSMAG00000019450	trmu	96	72.180	ENSDORG00000007455	Trmu	97	72.180	Dipodomys_ordii
ENSSMAG00000019450	trmu	90	44.236	FBgn0040337	CG3021	98	43.970	Drosophila_melanogaster
ENSSMAG00000019450	trmu	95	55.500	ENSEBUG00000007454	trmu	99	55.500	Eptatretus_burgeri
ENSSMAG00000019450	trmu	96	71.178	ENSEASG00005021725	TRMU	95	71.178	Equus_asinus_asinus
ENSSMAG00000019450	trmu	96	71.178	ENSECAG00000000467	TRMU	95	70.720	Equus_caballus
ENSSMAG00000019450	trmu	68	53.873	ENSEEUG00000000074	-	74	85.185	Erinaceus_europaeus
ENSSMAG00000019450	trmu	100	79.376	ENSELUG00000009464	trmu	99	81.522	Esox_lucius
ENSSMAG00000019450	trmu	96	70.677	ENSFCAG00000006533	TRMU	95	70.677	Felis_catus
ENSSMAG00000019450	trmu	89	70.526	ENSFALG00000010035	TRMU	96	70.526	Ficedula_albicollis
ENSSMAG00000019450	trmu	91	68.684	ENSFDAG00000017472	TRMU	97	68.684	Fukomys_damarensis
ENSSMAG00000019450	trmu	100	83.173	ENSFHEG00000003162	trmu	100	83.173	Fundulus_heteroclitus
ENSSMAG00000019450	trmu	97	73.956	ENSGMOG00000001323	trmu	100	73.956	Gadus_morhua
ENSSMAG00000019450	trmu	96	71.007	ENSGALG00000031922	TRMU	96	71.007	Gallus_gallus
ENSSMAG00000019450	trmu	98	85.086	ENSGAFG00000013331	trmu	98	85.086	Gambusia_affinis
ENSSMAG00000019450	trmu	100	85.343	ENSGACG00000019024	trmu	100	85.343	Gasterosteus_aculeatus
ENSSMAG00000019450	trmu	99	68.765	ENSGGOG00000000203	TRMU	98	68.765	Gorilla_gorilla
ENSSMAG00000019450	trmu	100	86.779	ENSHBUG00000023421	trmu	100	86.779	Haplochromis_burtoni
ENSSMAG00000019450	trmu	97	70.123	ENSHGLG00000009278	TRMU	96	70.123	Heterocephalus_glaber_female
ENSSMAG00000019450	trmu	97	70.123	ENSHGLG00100018863	TRMU	96	70.123	Heterocephalus_glaber_male
ENSSMAG00000019450	trmu	99	83.051	ENSHCOG00000013459	trmu	99	83.051	Hippocampus_comes
ENSSMAG00000019450	trmu	96	79.699	ENSIPUG00000009785	trmu	98	79.699	Ictalurus_punctatus
ENSSMAG00000019450	trmu	97	71.464	ENSSTOG00000010993	TRMU	96	71.464	Ictidomys_tridecemlineatus
ENSSMAG00000019450	trmu	99	67.386	ENSJJAG00000000667	Trmu	100	67.386	Jaculus_jaculus
ENSSMAG00000019450	trmu	100	83.654	ENSKMAG00000008516	trmu	100	83.654	Kryptolebias_marmoratus
ENSSMAG00000019450	trmu	100	84.615	ENSLBEG00000018831	trmu	100	84.615	Labrus_bergylta
ENSSMAG00000019450	trmu	97	74.442	ENSLACG00000013713	TRMU	96	74.442	Latimeria_chalumnae
ENSSMAG00000019450	trmu	96	79.699	ENSLOCG00000016066	trmu	95	79.699	Lepisosteus_oculatus
ENSSMAG00000019450	trmu	99	60.628	ENSLAFG00000005129	TRMU	99	60.628	Loxodonta_africana
ENSSMAG00000019450	trmu	97	69.479	ENSMFAG00000039767	TRMU	96	69.479	Macaca_fascicularis
ENSSMAG00000019450	trmu	97	69.479	ENSMMUG00000000807	TRMU	96	69.479	Macaca_mulatta
ENSSMAG00000019450	trmu	97	69.479	ENSMNEG00000028164	TRMU	96	69.479	Macaca_nemestrina
ENSSMAG00000019450	trmu	96	69.674	ENSMLEG00000033884	TRMU	95	69.674	Mandrillus_leucophaeus
ENSSMAG00000019450	trmu	100	86.058	ENSMAMG00000004717	trmu	100	86.058	Mastacembelus_armatus
ENSSMAG00000019450	trmu	100	87.260	ENSMZEG00005015797	trmu	100	87.260	Maylandia_zebra
ENSSMAG00000019450	trmu	76	71.166	ENSMGAG00000007550	TRMU	95	71.166	Meleagris_gallopavo
ENSSMAG00000019450	trmu	100	66.587	ENSMAUG00000022282	Trmu	98	66.587	Mesocricetus_auratus
ENSSMAG00000019450	trmu	96	69.674	ENSMICG00000029046	TRMU	97	69.674	Microcebus_murinus
ENSSMAG00000019450	trmu	99	67.866	ENSMOCG00000014641	Trmu	100	67.866	Microtus_ochrogaster
ENSSMAG00000019450	trmu	100	83.173	ENSMMOG00000007229	trmu	100	83.173	Mola_mola
ENSSMAG00000019450	trmu	98	66.748	ENSMODG00000007433	TRMU	96	66.748	Monodelphis_domestica
ENSSMAG00000019450	trmu	100	85.096	ENSMALG00000007721	trmu	100	85.096	Monopterus_albus
ENSSMAG00000019450	trmu	97	68.238	MGP_CAROLIEiJ_G0020134	Trmu	97	68.238	Mus_caroli
ENSSMAG00000019450	trmu	96	68.922	ENSMUSG00000022386	Trmu	96	68.922	Mus_musculus
ENSSMAG00000019450	trmu	96	68.672	MGP_PahariEiJ_G0020139	Trmu	96	68.672	Mus_pahari
ENSSMAG00000019450	trmu	96	68.922	MGP_SPRETEiJ_G0021031	Trmu	96	68.922	Mus_spretus
ENSSMAG00000019450	trmu	96	70.927	ENSMPUG00000002523	TRMU	95	70.927	Mustela_putorius_furo
ENSSMAG00000019450	trmu	99	68.357	ENSNGAG00000005132	Trmu	99	68.357	Nannospalax_galili
ENSSMAG00000019450	trmu	100	86.779	ENSNBRG00000022690	trmu	100	86.779	Neolamprologus_brichardi
ENSSMAG00000019450	trmu	97	69.383	ENSNLEG00000015773	TRMU	96	69.383	Nomascus_leucogenys
ENSSMAG00000019450	trmu	78	59.202	ENSMEUG00000000216	TRMU	98	59.202	Notamacropus_eugenii
ENSSMAG00000019450	trmu	98	70.270	ENSODEG00000014745	TRMU	100	69.065	Octodon_degus
ENSSMAG00000019450	trmu	100	87.260	ENSONIG00000009821	trmu	100	87.260	Oreochromis_niloticus
ENSSMAG00000019450	trmu	92	66.319	ENSOANG00000001891	TRMU	97	66.319	Ornithorhynchus_anatinus
ENSSMAG00000019450	trmu	90	69.681	ENSOCUG00000003664	TRMU	94	68.528	Oryctolagus_cuniculus
ENSSMAG00000019450	trmu	99	81.687	ENSORLG00000019015	trmu	99	81.687	Oryzias_latipes
ENSSMAG00000019450	trmu	99	82.169	ENSORLG00020006830	trmu	99	82.169	Oryzias_latipes_hni
ENSSMAG00000019450	trmu	99	82.169	ENSORLG00015003907	trmu	99	82.169	Oryzias_latipes_hsok
ENSSMAG00000019450	trmu	57	84.388	ENSOMEG00000015541	trmu	86	84.388	Oryzias_melastigma
ENSSMAG00000019450	trmu	97	68.395	ENSOGAG00000008096	TRMU	97	68.395	Otolemur_garnettii
ENSSMAG00000019450	trmu	91	68.684	ENSOARG00000019475	TRMU	93	68.684	Ovis_aries
ENSSMAG00000019450	trmu	99	68.765	ENSPPAG00000033944	TRMU	98	68.765	Pan_paniscus
ENSSMAG00000019450	trmu	96	70.927	ENSPPRG00000004197	TRMU	95	70.927	Panthera_pardus
ENSSMAG00000019450	trmu	67	71.119	ENSPTIG00000014122	TRMU	97	72.727	Panthera_tigris_altaica
ENSSMAG00000019450	trmu	99	68.765	ENSPTRG00000014510	TRMU	98	68.765	Pan_troglodytes
ENSSMAG00000019450	trmu	95	69.873	ENSPANG00000023074	TRMU	97	66.575	Papio_anubis
ENSSMAG00000019450	trmu	99	75.845	ENSPKIG00000002849	trmu	100	75.845	Paramormyrops_kingsleyae
ENSSMAG00000019450	trmu	89	70.732	ENSPSIG00000013020	TRMU	96	70.732	Pelodiscus_sinensis
ENSSMAG00000019450	trmu	98	84.069	ENSPMGG00000004083	trmu	98	84.069	Periophthalmus_magnuspinnatus
ENSSMAG00000019450	trmu	100	67.067	ENSPEMG00000014007	Trmu	98	67.067	Peromyscus_maniculatus_bairdii
ENSSMAG00000019450	trmu	96	66.750	ENSPCIG00000009923	TRMU	98	65.707	Phascolarctos_cinereus
ENSSMAG00000019450	trmu	97	81.390	ENSPFOG00000008197	trmu	90	81.390	Poecilia_formosa
ENSSMAG00000019450	trmu	99	84.746	ENSPLAG00000008414	trmu	99	84.746	Poecilia_latipinna
ENSSMAG00000019450	trmu	100	84.375	ENSPMEG00000004326	trmu	100	84.375	Poecilia_mexicana
ENSSMAG00000019450	trmu	99	84.988	ENSPREG00000007980	trmu	99	84.988	Poecilia_reticulata
ENSSMAG00000019450	trmu	99	69.343	ENSPPYG00000011949	TRMU	97	69.343	Pongo_abelii
ENSSMAG00000019450	trmu	90	63.564	ENSPCAG00000013462	TRMU	97	63.564	Procavia_capensis
ENSSMAG00000019450	trmu	99	68.293	ENSPCOG00000016539	TRMU	98	68.293	Propithecus_coquereli
ENSSMAG00000019450	trmu	97	64.516	ENSPVAG00000013202	TRMU	97	64.516	Pteropus_vampyrus
ENSSMAG00000019450	trmu	100	86.779	ENSPNYG00000005629	trmu	100	86.779	Pundamilia_nyererei
ENSSMAG00000019450	trmu	99	78.832	ENSPNAG00000006339	trmu	96	78.832	Pygocentrus_nattereri
ENSSMAG00000019450	trmu	96	68.421	ENSRNOG00000016465	Trmu	96	68.421	Rattus_norvegicus
ENSSMAG00000019450	trmu	97	68.238	ENSRBIG00000038973	TRMU	96	68.238	Rhinopithecus_bieti
ENSSMAG00000019450	trmu	97	68.486	ENSRROG00000004267	TRMU	96	68.486	Rhinopithecus_roxellana
ENSSMAG00000019450	trmu	93	34.230	YDL033C	SLM3	93	34.230	Saccharomyces_cerevisiae
ENSSMAG00000019450	trmu	99	69.007	ENSSBOG00000030184	TRMU	98	69.007	Saimiri_boliviensis_boliviensis
ENSSMAG00000019450	trmu	89	76.423	ENSSFOG00015020664	trmu	97	76.423	Scleropages_formosus
ENSSMAG00000019450	trmu	100	89.423	ENSSDUG00000011913	trmu	100	89.423	Seriola_dumerili
ENSSMAG00000019450	trmu	100	89.183	ENSSLDG00000011684	trmu	100	89.183	Seriola_lalandi_dorsalis
ENSSMAG00000019450	trmu	99	58.696	ENSSPUG00000017123	TRMU	98	58.696	Sphenodon_punctatus
ENSSMAG00000019450	trmu	100	84.135	ENSSPAG00000021875	trmu	100	84.135	Stegastes_partitus
ENSSMAG00000019450	trmu	97	70.471	ENSSSCG00000000007	TRMU	96	70.471	Sus_scrofa
ENSSMAG00000019450	trmu	89	71.850	ENSTGUG00000003663	-	100	71.850	Taeniopygia_guttata
ENSSMAG00000019450	trmu	99	84.262	ENSTRUG00000001231	trmu	100	84.262	Takifugu_rubripes
ENSSMAG00000019450	trmu	99	82.734	ENSTNIG00000010484	trmu	98	82.734	Tetraodon_nigroviridis
ENSSMAG00000019450	trmu	72	53.782	ENSTBEG00000011276	-	77	53.782	Tupaia_belangeri
ENSSMAG00000019450	trmu	96	71.429	ENSTTRG00000004160	TRMU	95	71.429	Tursiops_truncatus
ENSSMAG00000019450	trmu	70	73.630	ENSUAMG00000024825	TRMU	97	73.630	Ursus_americanus
ENSSMAG00000019450	trmu	97	58.313	ENSUMAG00000019079	TRMU	97	73.152	Ursus_maritimus
ENSSMAG00000019450	trmu	53	63.470	ENSVPAG00000000685	-	100	63.470	Vicugna_pacos
ENSSMAG00000019450	trmu	99	68.856	ENSVVUG00000024963	TRMU	97	68.856	Vulpes_vulpes
ENSSMAG00000019450	trmu	97	73.580	ENSXETG00000023304	trmu	95	73.580	Xenopus_tropicalis
ENSSMAG00000019450	trmu	99	82.212	ENSXCOG00000015105	trmu	99	82.212	Xiphophorus_couchianus
ENSSMAG00000019450	trmu	99	84.504	ENSXMAG00000006697	trmu	99	84.504	Xiphophorus_maculatus