EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019473 (Gene tree)
Gene ID: -
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: La ribonucleoprotein domain family%2C member 4Aa
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 9593 bases
Position: chr11:12091510-12101102
Accession: ZDB-GENE-090313-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000031800	La	PF05383.17	2.9e-17	1	1
ENSSMAP00000031781	La	PF05383.17	3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000032170	-	2997	-	ENSSMAP00000031781	807 (aa)	-	-
ENSSMAT00000032189	-	2955	-	ENSSMAP00000031800	793 (aa)	-	A0A2U9C0Q8

Gene Model

Click here to download ENSSMAG00000019473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019473	larp4aa	81	38.996	ENSSMAG00000005982	-	55	65.812
ENSSMAG00000019473	larp4aa	95	50.512	ENSSMAG00000002838	larp4ab	100	49.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019473	larp4aa	82	63.271	ENSG00000161813	LARP4	98	62.963	Homo_sapiens
ENSSMAG00000019473	larp4aa	95	52.235	ENSAPOG00000021331	larp4ab	100	51.790	Acanthochromis_polyacanthus
ENSSMAG00000019473	larp4aa	100	88.779	ENSAPOG00000007142	larp4aa	100	89.026	Acanthochromis_polyacanthus
ENSSMAG00000019473	larp4aa	100	81.704	ENSACIG00000001198	larp4aa	100	83.459	Amphilophus_citrinellus
ENSSMAG00000019473	larp4aa	100	88.656	ENSAOCG00000002408	larp4aa	100	89.273	Amphiprion_ocellaris
ENSSMAG00000019473	larp4aa	95	51.538	ENSAOCG00000006387	larp4ab	100	51.279	Amphiprion_ocellaris
ENSSMAG00000019473	larp4aa	100	88.656	ENSAPEG00000019058	larp4aa	100	89.273	Amphiprion_percula
ENSSMAG00000019473	larp4aa	100	87.312	ENSATEG00000020715	larp4aa	100	87.437	Anabas_testudineus
ENSSMAG00000019473	larp4aa	95	49.810	ENSATEG00000001018	larp4ab	100	48.666	Anabas_testudineus
ENSSMAG00000019473	larp4aa	95	50.504	ENSAPLG00000013661	LARP4	99	51.134	Anas_platyrhynchos
ENSSMAG00000019473	larp4aa	95	50.701	ENSACAG00000017133	LARP4	96	49.554	Anolis_carolinensis
ENSSMAG00000019473	larp4aa	82	64.075	ENSANAG00000029342	LARP4	98	63.757	Aotus_nancymaae
ENSSMAG00000019473	larp4aa	100	84.152	ENSACLG00000002575	larp4aa	100	85.732	Astatotilapia_calliptera
ENSSMAG00000019473	larp4aa	100	66.507	ENSAMXG00000036493	larp4aa	100	67.464	Astyanax_mexicanus
ENSSMAG00000019473	larp4aa	100	51.874	ENSAMXG00000001515	larp4ab	100	54.251	Astyanax_mexicanus
ENSSMAG00000019473	larp4aa	82	63.807	ENSCJAG00000021131	LARP4	99	62.082	Callithrix_jacchus
ENSSMAG00000019473	larp4aa	82	63.612	ENSCAFG00020014554	LARP4	99	60.976	Canis_lupus_dingo
ENSSMAG00000019473	larp4aa	82	64.075	ENSTSYG00000004342	LARP4	98	63.660	Carlito_syrichta
ENSSMAG00000019473	larp4aa	94	39.896	ENSCAPG00000012942	LARP4	100	38.492	Cavia_aperea
ENSSMAG00000019473	larp4aa	95	45.616	ENSCPOG00000020519	LARP4	99	45.570	Cavia_porcellus
ENSSMAG00000019473	larp4aa	87	61.710	ENSCCAG00000024439	LARP4	98	63.228	Cebus_capucinus
ENSSMAG00000019473	larp4aa	95	47.927	ENSCATG00000044528	LARP4	99	48.258	Cercocebus_atys
ENSSMAG00000019473	larp4aa	95	50.955	ENSCPBG00000019407	LARP4	80	65.885	Chrysemys_picta_bellii
ENSSMAG00000019473	larp4aa	82	64.611	ENSCANG00000029159	-	98	64.021	Colobus_angolensis_palliatus
ENSSMAG00000019473	larp4aa	95	44.346	ENSCANG00000033097	-	91	60.671	Colobus_angolensis_palliatus
ENSSMAG00000019473	larp4aa	55	56.893	ENSCSEG00000003240	larp4ab	94	47.922	Cynoglossus_semilaevis
ENSSMAG00000019473	larp4aa	100	86.169	ENSCSEG00000001963	larp4aa	100	86.047	Cynoglossus_semilaevis
ENSSMAG00000019473	larp4aa	100	83.784	ENSCVAG00000005488	larp4aa	100	83.292	Cyprinodon_variegatus
ENSSMAG00000019473	larp4aa	100	63.647	ENSDARG00000078401	larp4aa	100	64.303	Danio_rerio
ENSSMAG00000019473	larp4aa	95	52.516	ENSDARG00000074979	larp4ab	83	82.313	Danio_rerio
ENSSMAG00000019473	larp4aa	69	55.351	ENSETEG00000011683	LARP4	74	55.351	Echinops_telfairi
ENSSMAG00000019473	larp4aa	66	40.642	ENSEBUG00000004426	LARP4	95	39.432	Eptatretus_burgeri
ENSSMAG00000019473	larp4aa	66	60.084	ENSEASG00005004356	LARP4	100	60.084	Equus_asinus_asinus
ENSSMAG00000019473	larp4aa	53	85.470	ENSEEUG00000000316	LARP4	69	85.470	Erinaceus_europaeus
ENSSMAG00000019473	larp4aa	95	52.597	ENSELUG00000018650	larp4ab	85	79.386	Esox_lucius
ENSSMAG00000019473	larp4aa	100	62.836	ENSELUG00000000395	larp4aa	89	74.653	Esox_lucius
ENSSMAG00000019473	larp4aa	82	64.785	ENSFCAG00000031897	LARP4	98	64.456	Felis_catus
ENSSMAG00000019473	larp4aa	80	51.589	ENSFALG00000002114	LARP4	95	52.968	Ficedula_albicollis
ENSSMAG00000019473	larp4aa	95	49.487	ENSFDAG00000006406	-	99	50.000	Fukomys_damarensis
ENSSMAG00000019473	larp4aa	95	46.313	ENSFHEG00000013854	larp4ab	99	45.455	Fundulus_heteroclitus
ENSSMAG00000019473	larp4aa	100	83.028	ENSFHEG00000004338	larp4aa	100	82.540	Fundulus_heteroclitus
ENSSMAG00000019473	larp4aa	100	73.367	ENSGMOG00000008246	larp4aa	100	73.618	Gadus_morhua
ENSSMAG00000019473	larp4aa	91	50.598	ENSGALG00000042122	LARP4	92	50.870	Gallus_gallus
ENSSMAG00000019473	larp4aa	95	48.329	ENSGAFG00000021777	larp4ab	99	47.558	Gambusia_affinis
ENSSMAG00000019473	larp4aa	100	81.328	ENSGACG00000008381	larp4aa	98	90.884	Gasterosteus_aculeatus
ENSSMAG00000019473	larp4aa	95	49.806	ENSGACG00000000680	larp4ab	99	51.888	Gasterosteus_aculeatus
ENSSMAG00000019473	larp4aa	95	50.509	ENSGAGG00000006969	LARP4	99	50.509	Gopherus_agassizii
ENSSMAG00000019473	larp4aa	64	63.281	ENSGGOG00000015230	LARP4	90	61.338	Gorilla_gorilla
ENSSMAG00000019473	larp4aa	100	83.907	ENSHBUG00000023074	larp4aa	100	85.486	Haplochromis_burtoni
ENSSMAG00000019473	larp4aa	80	49.689	ENSHGLG00000013875	-	96	48.302	Heterocephalus_glaber_female
ENSSMAG00000019473	larp4aa	95	47.150	ENSHGLG00100011678	-	99	45.849	Heterocephalus_glaber_male
ENSSMAG00000019473	larp4aa	100	75.990	ENSHCOG00000015951	larp4aa	100	75.679	Hippocampus_comes
ENSSMAG00000019473	larp4aa	95	47.674	ENSHCOG00000020857	larp4ab	100	46.369	Hippocampus_comes
ENSSMAG00000019473	larp4aa	100	63.088	ENSIPUG00000007514	larp4aa	100	63.075	Ictalurus_punctatus
ENSSMAG00000019473	larp4aa	95	47.237	ENSIPUG00000021659	larp4ab	99	48.226	Ictalurus_punctatus
ENSSMAG00000019473	larp4aa	95	48.535	ENSKMAG00000018556	larp4ab	100	48.489	Kryptolebias_marmoratus
ENSSMAG00000019473	larp4aa	100	82.077	ENSKMAG00000006800	larp4aa	100	82.143	Kryptolebias_marmoratus
ENSSMAG00000019473	larp4aa	97	85.006	ENSLBEG00000014537	larp4aa	100	84.185	Labrus_bergylta
ENSSMAG00000019473	larp4aa	95	49.935	ENSLBEG00000019306	larp4ab	100	50.257	Labrus_bergylta
ENSSMAG00000019473	larp4aa	99	50.419	ENSLACG00000019090	LARP4	99	50.440	Latimeria_chalumnae
ENSSMAG00000019473	larp4aa	100	62.225	ENSLOCG00000007113	larp4ab	100	62.301	Lepisosteus_oculatus
ENSSMAG00000019473	larp4aa	81	47.685	ENSLAFG00000005160	LARP4	99	49.107	Loxodonta_africana
ENSSMAG00000019473	larp4aa	82	64.343	ENSMFAG00000043681	LARP4	98	64.021	Macaca_fascicularis
ENSSMAG00000019473	larp4aa	82	64.343	ENSMMUG00000008172	LARP4	98	64.021	Macaca_mulatta
ENSSMAG00000019473	larp4aa	94	48.285	ENSMNEG00000034602	LARP4	98	48.553	Macaca_nemestrina
ENSSMAG00000019473	larp4aa	83	48.095	ENSMNEG00000037799	-	96	47.442	Macaca_nemestrina
ENSSMAG00000019473	larp4aa	82	64.343	ENSMLEG00000039661	LARP4	98	64.021	Mandrillus_leucophaeus
ENSSMAG00000019473	larp4aa	100	88.547	ENSMAMG00000011206	larp4aa	100	87.562	Mastacembelus_armatus
ENSSMAG00000019473	larp4aa	95	50.773	ENSMAMG00000002616	larp4ab	100	51.338	Mastacembelus_armatus
ENSSMAG00000019473	larp4aa	100	84.889	ENSMZEG00005001813	larp4aa	100	85.855	Maylandia_zebra
ENSSMAG00000019473	larp4aa	91	49.934	ENSMGAG00000010598	LARP4	92	50.066	Meleagris_gallopavo
ENSSMAG00000019473	larp4aa	80	64.972	ENSMICG00000030156	-	88	64.972	Microcebus_murinus
ENSSMAG00000019473	larp4aa	69	77.308	ENSMICG00000012388	-	97	85.256	Microcebus_murinus
ENSSMAG00000019473	larp4aa	100	79.357	ENSMMOG00000004785	larp4aa	100	79.357	Mola_mola
ENSSMAG00000019473	larp4aa	95	47.464	ENSMMOG00000021861	larp4ab	97	57.909	Mola_mola
ENSSMAG00000019473	larp4aa	73	64.688	MGP_CAROLIEiJ_G0020281	Larp4	84	64.577	Mus_caroli
ENSSMAG00000019473	larp4aa	100	84.663	ENSNBRG00000011292	larp4aa	100	85.609	Neolamprologus_brichardi
ENSSMAG00000019473	larp4aa	82	63.539	ENSNLEG00000017798	LARP4	98	63.228	Nomascus_leucogenys
ENSSMAG00000019473	larp4aa	95	48.571	ENSODEG00000009770	LARP4	100	48.512	Octodon_degus
ENSSMAG00000019473	larp4aa	100	85.069	ENSONIG00000011895	larp4aa	100	86.466	Oreochromis_niloticus
ENSSMAG00000019473	larp4aa	95	47.949	ENSONIG00000019124	larp4ab	99	46.907	Oreochromis_niloticus
ENSSMAG00000019473	larp4aa	64	56.767	ENSOANG00000004373	LARP4	92	55.413	Ornithorhynchus_anatinus
ENSSMAG00000019473	larp4aa	95	49.551	ENSOCUG00000026872	-	99	49.040	Oryctolagus_cuniculus
ENSSMAG00000019473	larp4aa	95	48.656	ENSOCUG00000021417	-	99	48.338	Oryctolagus_cuniculus
ENSSMAG00000019473	larp4aa	100	78.986	ENSORLG00000006758	larp4aa	100	78.245	Oryzias_latipes
ENSSMAG00000019473	larp4aa	100	78.616	ENSORLG00020010258	larp4aa	100	77.998	Oryzias_latipes_hni
ENSSMAG00000019473	larp4aa	100	77.998	ENSORLG00015002292	larp4aa	100	77.379	Oryzias_latipes_hsok
ENSSMAG00000019473	larp4aa	100	75.031	ENSOMEG00000019749	larp4aa	96	85.593	Oryzias_melastigma
ENSSMAG00000019473	larp4aa	67	63.542	ENSPPAG00000035100	LARP4	86	63.369	Pan_paniscus
ENSSMAG00000019473	larp4aa	82	64.785	ENSPPRG00000004522	LARP4	98	64.456	Panthera_pardus
ENSSMAG00000019473	larp4aa	82	64.785	ENSPTIG00000015617	LARP4	98	64.456	Panthera_tigris_altaica
ENSSMAG00000019473	larp4aa	87	61.710	ENSPTRG00000004935	LARP4	98	62.963	Pan_troglodytes
ENSSMAG00000019473	larp4aa	82	64.343	ENSPANG00000022964	LARP4	98	64.021	Papio_anubis
ENSSMAG00000019473	larp4aa	100	59.334	ENSPKIG00000005950	larp4ab	100	59.857	Paramormyrops_kingsleyae
ENSSMAG00000019473	larp4aa	52	57.708	ENSPMAG00000002788	LARP4	98	41.250	Petromyzon_marinus
ENSSMAG00000019473	larp4aa	96	49.686	ENSPCIG00000000384	LARP4	99	50.191	Phascolarctos_cinereus
ENSSMAG00000019473	larp4aa	95	47.429	ENSPFOG00000009764	larp4ab	99	47.409	Poecilia_formosa
ENSSMAG00000019473	larp4aa	100	83.436	ENSPFOG00000013148	larp4aa	100	82.699	Poecilia_formosa
ENSSMAG00000019473	larp4aa	95	47.558	ENSPLAG00000008502	larp4ab	99	47.668	Poecilia_latipinna
ENSSMAG00000019473	larp4aa	100	83.146	ENSPLAG00000013626	larp4aa	100	82.397	Poecilia_latipinna
ENSSMAG00000019473	larp4aa	95	47.765	ENSPMEG00000002720	larp4ab	99	47.449	Poecilia_mexicana
ENSSMAG00000019473	larp4aa	100	83.681	ENSPMEG00000014271	larp4aa	100	82.699	Poecilia_mexicana
ENSSMAG00000019473	larp4aa	100	83.500	ENSPREG00000022597	larp4aa	100	82.750	Poecilia_reticulata
ENSSMAG00000019473	larp4aa	64	55.641	ENSPPYG00000004512	-	99	56.405	Pongo_abelii
ENSSMAG00000019473	larp4aa	77	67.010	ENSPCAG00000003671	LARP4	82	67.010	Procavia_capensis
ENSSMAG00000019473	larp4aa	82	64.075	ENSPCOG00000026291	LARP4	98	64.312	Propithecus_coquereli
ENSSMAG00000019473	larp4aa	100	84.152	ENSPNYG00000022265	larp4aa	100	85.732	Pundamilia_nyererei
ENSSMAG00000019473	larp4aa	97	64.669	ENSPNAG00000024770	larp4aa	99	65.293	Pygocentrus_nattereri
ENSSMAG00000019473	larp4aa	96	54.203	ENSPNAG00000014478	larp4ab	99	55.102	Pygocentrus_nattereri
ENSSMAG00000019473	larp4aa	73	62.825	ENSRBIG00000038857	-	92	64.021	Rhinopithecus_bieti
ENSSMAG00000019473	larp4aa	87	53.257	ENSRBIG00000036890	-	99	54.023	Rhinopithecus_bieti
ENSSMAG00000019473	larp4aa	82	64.343	ENSRROG00000042764	-	98	64.439	Rhinopithecus_roxellana
ENSSMAG00000019473	larp4aa	95	46.563	ENSRROG00000025487	-	99	54.023	Rhinopithecus_roxellana
ENSSMAG00000019473	larp4aa	82	63.003	ENSSBOG00000026650	LARP4	98	62.698	Saimiri_boliviensis_boliviensis
ENSSMAG00000019473	larp4aa	99	61.694	ENSSFOG00015003868	larp4aa	99	63.396	Scleropages_formosus
ENSSMAG00000019473	larp4aa	100	59.424	ENSSFOG00015014096	larp4ab	100	60.339	Scleropages_formosus
ENSSMAG00000019473	larp4aa	95	51.195	ENSSDUG00000006655	larp4ab	100	51.899	Seriola_dumerili
ENSSMAG00000019473	larp4aa	100	91.626	ENSSDUG00000010621	larp4aa	100	91.626	Seriola_dumerili
ENSSMAG00000019473	larp4aa	100	91.133	ENSSLDG00000004942	larp4aa	100	91.502	Seriola_lalandi_dorsalis
ENSSMAG00000019473	larp4aa	95	51.650	ENSSLDG00000001791	larp4ab	100	53.105	Seriola_lalandi_dorsalis
ENSSMAG00000019473	larp4aa	69	61.558	ENSSARG00000012469	LARP4	87	55.741	Sorex_araneus
ENSSMAG00000019473	larp4aa	90	49.326	ENSSPUG00000016552	LARP4	92	48.387	Sphenodon_punctatus
ENSSMAG00000019473	larp4aa	87	91.304	ENSSPAG00000007222	larp4aa	94	91.858	Stegastes_partitus
ENSSMAG00000019473	larp4aa	95	50.830	ENSSPAG00000002172	larp4ab	100	51.151	Stegastes_partitus
ENSSMAG00000019473	larp4aa	58	66.972	ENSSSCG00000028516	LARP4	99	49.519	Sus_scrofa
ENSSMAG00000019473	larp4aa	95	49.040	ENSTGUG00000003479	LARP4	99	49.746	Taeniopygia_guttata
ENSSMAG00000019473	larp4aa	95	47.208	ENSTRUG00000007206	larp4ab	100	46.447	Takifugu_rubripes
ENSSMAG00000019473	larp4aa	95	46.086	ENSTNIG00000014571	larp4ab	100	45.802	Tetraodon_nigroviridis
ENSSMAG00000019473	larp4aa	95	77.381	ENSTNIG00000015109	larp4aa	99	77.381	Tetraodon_nigroviridis
ENSSMAG00000019473	larp4aa	80	53.333	ENSTBEG00000005167	LARP4	84	53.333	Tupaia_belangeri
ENSSMAG00000019473	larp4aa	95	47.583	ENSTTRG00000003764	LARP4	99	47.022	Tursiops_truncatus
ENSSMAG00000019473	larp4aa	84	64.491	ENSVVUG00000024717	LARP4	99	60.976	Vulpes_vulpes
ENSSMAG00000019473	larp4aa	87	50.989	ENSXETG00000007283	larp4	95	49.294	Xenopus_tropicalis
ENSSMAG00000019473	larp4aa	100	78.941	ENSXCOG00000006387	larp4aa	100	78.256	Xiphophorus_couchianus
ENSSMAG00000019473	larp4aa	95	48.450	ENSXMAG00000002156	larp4ab	99	47.809	Xiphophorus_maculatus
ENSSMAG00000019473	larp4aa	100	83.641	ENSXMAG00000010519	larp4aa	100	83.067	Xiphophorus_maculatus