EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019540 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4866 bases
Position: chr12:4246908-4251773
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000031899	zf-met	PF12874.7	2.6e-23	1	3
ENSSMAP00000031899	zf-met	PF12874.7	2.6e-23	2	3
ENSSMAP00000031899	zf-met	PF12874.7	2.6e-23	3	3
ENSSMAP00000031899	zf-C2H2_jaz	PF12171.8	9.5e-21	1	3
ENSSMAP00000031899	zf-C2H2_jaz	PF12171.8	9.5e-21	2	3
ENSSMAP00000031899	zf-C2H2_jaz	PF12171.8	9.5e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000032289	-	1829	-	ENSSMAP00000031899	455 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000019540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019540	-	52	32.000	ENSSMAG00000017693	zmat4a	74	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019540	-	53	66.255	ENSG00000172667	ZMAT3	96	59.459	Homo_sapiens
ENSSMAG00000019540	-	99	88.377	ENSAPOG00000015037	zmat3	92	87.061	Acanthochromis_polyacanthus
ENSSMAG00000019540	-	67	58.280	ENSAMEG00000010742	ZMAT3	80	66.803	Ailuropoda_melanoleuca
ENSSMAG00000019540	-	87	77.358	ENSACIG00000023037	zmat3	100	78.873	Amphilophus_citrinellus
ENSSMAG00000019540	-	99	88.596	ENSAOCG00000017955	zmat3	100	92.857	Amphiprion_ocellaris
ENSSMAG00000019540	-	63	83.275	ENSAPEG00000014553	zmat3	99	83.275	Amphiprion_percula
ENSSMAG00000019540	-	60	83.577	ENSATEG00000022244	zmat3	96	83.577	Anabas_testudineus
ENSSMAG00000019540	-	51	66.116	ENSAPLG00000013292	ZMAT3	78	66.116	Anas_platyrhynchos
ENSSMAG00000019540	-	55	62.791	ENSACAG00000005005	ZMAT3	85	63.529	Anolis_carolinensis
ENSSMAG00000019540	-	65	54.181	ENSANAG00000035673	ZMAT3	79	62.869	Aotus_nancymaae
ENSSMAG00000019540	-	99	85.307	ENSACLG00000026272	zmat3	100	89.189	Astatotilapia_calliptera
ENSSMAG00000019540	-	72	61.094	ENSAMXG00000009798	zmat3	74	65.845	Astyanax_mexicanus
ENSSMAG00000019540	-	53	66.250	ENSBTAG00000012463	ZMAT3	80	67.083	Bos_taurus
ENSSMAG00000019540	-	66	57.190	ENSCJAG00000013399	ZMAT3	80	65.574	Callithrix_jacchus
ENSSMAG00000019540	-	67	58.065	ENSCAFG00000011081	ZMAT3	80	67.500	Canis_familiaris
ENSSMAG00000019540	-	67	58.065	ENSCAFG00020023107	ZMAT3	80	67.500	Canis_lupus_dingo
ENSSMAG00000019540	-	53	65.844	ENSCHIG00000025074	ZMAT3	94	60.417	Capra_hircus
ENSSMAG00000019540	-	64	59.184	ENSTSYG00000026546	ZMAT3	96	59.396	Carlito_syrichta
ENSSMAG00000019540	-	53	66.527	ENSCAPG00000014645	ZMAT3	80	66.527	Cavia_aperea
ENSSMAG00000019540	-	53	66.527	ENSCPOG00000003865	ZMAT3	80	66.527	Cavia_porcellus
ENSSMAG00000019540	-	66	57.190	ENSCCAG00000036721	ZMAT3	80	65.432	Cebus_capucinus
ENSSMAG00000019540	-	63	54.514	ENSCATG00000025137	ZMAT3	92	54.514	Cercocebus_atys
ENSSMAG00000019540	-	53	66.527	ENSCLAG00000013464	ZMAT3	80	66.527	Chinchilla_lanigera
ENSSMAG00000019540	-	55	64.032	ENSCSAG00000012935	ZMAT3	81	65.447	Chlorocebus_sabaeus
ENSSMAG00000019540	-	53	67.490	ENSCHOG00000005591	ZMAT3	80	67.490	Choloepus_hoffmanni
ENSSMAG00000019540	-	62	58.333	ENSCPBG00000026917	ZMAT3	95	58.333	Chrysemys_picta_bellii
ENSSMAG00000019540	-	55	64.173	ENSCANG00000029476	ZMAT3	96	59.864	Colobus_angolensis_palliatus
ENSSMAG00000019540	-	53	66.531	ENSCGRG00001012339	Zmat3	80	66.531	Cricetulus_griseus_chok1gshd
ENSSMAG00000019540	-	53	66.531	ENSCGRG00000011491	Zmat3	80	66.531	Cricetulus_griseus_crigri
ENSSMAG00000019540	-	99	80.659	ENSCSEG00000019463	zmat3	100	82.731	Cynoglossus_semilaevis
ENSSMAG00000019540	-	99	79.605	ENSCVAG00000011847	zmat3	100	82.051	Cyprinodon_variegatus
ENSSMAG00000019540	-	52	73.418	ENSDARG00000080021	zmat3	75	73.418	Danio_rerio
ENSSMAG00000019540	-	53	66.393	ENSDNOG00000012284	ZMAT3	80	66.393	Dasypus_novemcinctus
ENSSMAG00000019540	-	53	65.844	ENSDORG00000011801	Zmat3	80	65.844	Dipodomys_ordii
ENSSMAG00000019540	-	55	56.190	ENSETEG00000008883	ZMAT3	80	56.190	Echinops_telfairi
ENSSMAG00000019540	-	53	66.255	ENSEASG00005016887	ZMAT3	80	66.255	Equus_asinus_asinus
ENSSMAG00000019540	-	53	66.255	ENSECAG00000012784	ZMAT3	80	66.255	Equus_caballus
ENSSMAG00000019540	-	53	87.879	ENSEEUG00000001126	ZMAT3	80	59.167	Erinaceus_europaeus
ENSSMAG00000019540	-	68	63.226	ENSELUG00000010132	zmat3	76	66.553	Esox_lucius
ENSSMAG00000019540	-	67	58.576	ENSFCAG00000014578	ZMAT3	80	66.667	Felis_catus
ENSSMAG00000019540	-	51	66.116	ENSFALG00000008403	ZMAT3	96	58.000	Ficedula_albicollis
ENSSMAG00000019540	-	53	66.250	ENSFDAG00000013376	ZMAT3	80	66.250	Fukomys_damarensis
ENSSMAG00000019540	-	64	84.646	ENSFHEG00000003221	zmat3	100	86.614	Fundulus_heteroclitus
ENSSMAG00000019540	-	55	75.502	ENSGMOG00000008558	zmat3	99	75.502	Gadus_morhua
ENSSMAG00000019540	-	51	67.373	ENSGALG00000040948	ZMAT3	87	67.373	Gallus_gallus
ENSSMAG00000019540	-	58	84.091	ENSGACG00000006175	zmat3	98	84.091	Gasterosteus_aculeatus
ENSSMAG00000019540	-	62	58.681	ENSGAGG00000009275	ZMAT3	95	58.681	Gopherus_agassizii
ENSSMAG00000019540	-	53	66.255	ENSGGOG00000009975	ZMAT3	96	59.459	Gorilla_gorilla
ENSSMAG00000019540	-	99	85.965	ENSHBUG00000004401	zmat3	99	88.571	Haplochromis_burtoni
ENSSMAG00000019540	-	53	66.527	ENSHGLG00000011523	ZMAT3	80	66.527	Heterocephalus_glaber_female
ENSSMAG00000019540	-	53	66.527	ENSHGLG00100012235	ZMAT3	80	66.527	Heterocephalus_glaber_male
ENSSMAG00000019540	-	75	71.345	ENSHCOG00000010624	zmat3	97	66.572	Hippocampus_comes
ENSSMAG00000019540	-	64	60.526	ENSIPUG00000003043	zmat3	88	67.063	Ictalurus_punctatus
ENSSMAG00000019540	-	53	65.690	ENSSTOG00000028436	ZMAT3	80	65.844	Ictidomys_tridecemlineatus
ENSSMAG00000019540	-	62	60.554	ENSJJAG00000004288	Zmat3	93	58.904	Jaculus_jaculus
ENSSMAG00000019540	-	99	83.991	ENSKMAG00000008962	zmat3	89	85.887	Kryptolebias_marmoratus
ENSSMAG00000019540	-	64	88.583	ENSLBEG00000001993	zmat3	100	88.583	Labrus_bergylta
ENSSMAG00000019540	-	52	62.762	ENSLACG00000015780	ZMAT3	79	55.000	Latimeria_chalumnae
ENSSMAG00000019540	-	52	72.152	ENSLOCG00000001108	zmat3	68	68.199	Lepisosteus_oculatus
ENSSMAG00000019540	-	53	66.393	ENSLAFG00000000897	ZMAT3	79	67.373	Loxodonta_africana
ENSSMAG00000019540	-	55	64.032	ENSMFAG00000021292	ZMAT3	95	55.017	Macaca_fascicularis
ENSSMAG00000019540	-	55	63.780	ENSMMUG00000003216	ZMAT3	81	65.182	Macaca_mulatta
ENSSMAG00000019540	-	55	63.780	ENSMNEG00000036725	ZMAT3	95	55.017	Macaca_nemestrina
ENSSMAG00000019540	-	63	59.247	ENSMLEG00000026279	ZMAT3	93	59.247	Mandrillus_leucophaeus
ENSSMAG00000019540	-	99	85.965	ENSMAMG00000012349	zmat3	100	83.392	Mastacembelus_armatus
ENSSMAG00000019540	-	98	85.588	ENSMZEG00005015427	zmat3	100	88.462	Maylandia_zebra
ENSSMAG00000019540	-	51	66.116	ENSMGAG00000009873	ZMAT3	78	66.116	Meleagris_gallopavo
ENSSMAG00000019540	-	52	66.527	ENSMAUG00000001986	Zmat3	78	66.527	Mesocricetus_auratus
ENSSMAG00000019540	-	53	65.432	ENSMICG00000049501	ZMAT3	80	66.109	Microcebus_murinus
ENSSMAG00000019540	-	52	66.946	ENSMOCG00000018844	Zmat3	78	66.946	Microtus_ochrogaster
ENSSMAG00000019540	-	74	81.250	ENSMMOG00000001603	zmat3	100	76.369	Mola_mola
ENSSMAG00000019540	-	62	54.895	ENSMODG00000021308	ZMAT3	90	53.925	Monodelphis_domestica
ENSSMAG00000019540	-	99	85.088	ENSMALG00000019683	zmat3	97	84.138	Monopterus_albus
ENSSMAG00000019540	-	52	67.083	MGP_CAROLIEiJ_G0024914	Zmat3	78	67.083	Mus_caroli
ENSSMAG00000019540	-	52	67.083	ENSMUSG00000027663	Zmat3	78	67.083	Mus_musculus
ENSSMAG00000019540	-	52	66.250	MGP_PahariEiJ_G0026359	Zmat3	78	66.250	Mus_pahari
ENSSMAG00000019540	-	52	67.083	MGP_SPRETEiJ_G0025848	Zmat3	78	67.083	Mus_spretus
ENSSMAG00000019540	-	67	58.147	ENSMPUG00000017206	ZMAT3	80	66.667	Mustela_putorius_furo
ENSSMAG00000019540	-	51	66.390	ENSMLUG00000013074	ZMAT3	78	66.390	Myotis_lucifugus
ENSSMAG00000019540	-	57	63.433	ENSNGAG00000023602	Zmat3	96	59.933	Nannospalax_galili
ENSSMAG00000019540	-	65	88.571	ENSNBRG00000020886	zmat3	99	88.571	Neolamprologus_brichardi
ENSSMAG00000019540	-	53	65.984	ENSNLEG00000005658	ZMAT3	96	59.259	Nomascus_leucogenys
ENSSMAG00000019540	-	53	64.583	ENSMEUG00000015724	ZMAT3	79	62.500	Notamacropus_eugenii
ENSSMAG00000019540	-	53	65.690	ENSODEG00000003313	ZMAT3	80	65.844	Octodon_degus
ENSSMAG00000019540	-	74	75.516	ENSONIG00000008388	zmat3	95	86.268	Oreochromis_niloticus
ENSSMAG00000019540	-	62	51.502	ENSOANG00000009901	ZMAT3	77	51.542	Ornithorhynchus_anatinus
ENSSMAG00000019540	-	53	67.364	ENSOCUG00000004658	ZMAT3	80	65.432	Oryctolagus_cuniculus
ENSSMAG00000019540	-	99	76.096	ENSORLG00000011575	zmat3	92	74.565	Oryzias_latipes
ENSSMAG00000019540	-	99	74.342	ENSORLG00020005858	zmat3	92	73.002	Oryzias_latipes_hni
ENSSMAG00000019540	-	99	75.000	ENSORLG00015003707	zmat3	92	73.218	Oryzias_latipes_hsok
ENSSMAG00000019540	-	99	76.535	ENSOMEG00000011303	zmat3	100	75.385	Oryzias_melastigma
ENSSMAG00000019540	-	54	64.940	ENSOGAG00000003252	ZMAT3	81	64.940	Otolemur_garnettii
ENSSMAG00000019540	-	53	65.574	ENSOARG00000020713	ZMAT3	94	60.208	Ovis_aries
ENSSMAG00000019540	-	53	66.255	ENSPPAG00000035483	ZMAT3	96	59.459	Pan_paniscus
ENSSMAG00000019540	-	67	58.280	ENSPPRG00000004407	ZMAT3	80	66.803	Panthera_pardus
ENSSMAG00000019540	-	67	58.280	ENSPTIG00000009929	ZMAT3	80	66.803	Panthera_tigris_altaica
ENSSMAG00000019540	-	53	65.984	ENSPTRG00000015641	ZMAT3	96	59.259	Pan_troglodytes
ENSSMAG00000019540	-	63	59.247	ENSPANG00000023167	ZMAT3	93	59.247	Papio_anubis
ENSSMAG00000019540	-	53	69.583	ENSPKIG00000023370	zmat3	69	67.323	Paramormyrops_kingsleyae
ENSSMAG00000019540	-	51	64.463	ENSPSIG00000014839	ZMAT3	77	64.463	Pelodiscus_sinensis
ENSSMAG00000019540	-	56	75.591	ENSPMGG00000023924	zmat3	90	75.591	Periophthalmus_magnuspinnatus
ENSSMAG00000019540	-	52	65.272	ENSPEMG00000019154	Zmat3	78	65.272	Peromyscus_maniculatus_bairdii
ENSSMAG00000019540	-	73	81.873	ENSPFOG00000019206	zmat3	82	83.230	Poecilia_formosa
ENSSMAG00000019540	-	95	83.399	ENSPLAG00000022572	zmat3	100	83.399	Poecilia_latipinna
ENSSMAG00000019540	-	70	71.233	ENSPMEG00000004131	-	100	76.923	Poecilia_mexicana
ENSSMAG00000019540	-	95	83.465	ENSPREG00000022632	zmat3	100	83.465	Poecilia_reticulata
ENSSMAG00000019540	-	53	65.984	ENSPPYG00000014315	ZMAT3	96	59.259	Pongo_abelii
ENSSMAG00000019540	-	52	67.511	ENSPCAG00000008585	ZMAT3	79	67.511	Procavia_capensis
ENSSMAG00000019540	-	53	65.432	ENSPCOG00000022835	ZMAT3	80	66.109	Propithecus_coquereli
ENSSMAG00000019540	-	53	65.574	ENSPVAG00000004489	ZMAT3	80	65.574	Pteropus_vampyrus
ENSSMAG00000019540	-	65	88.571	ENSPNYG00000014350	zmat3	99	88.571	Pundamilia_nyererei
ENSSMAG00000019540	-	72	59.878	ENSPNAG00000015664	zmat3	74	64.437	Pygocentrus_nattereri
ENSSMAG00000019540	-	67	57.282	ENSRNOG00000010119	Zmat3	78	66.527	Rattus_norvegicus
ENSSMAG00000019540	-	55	64.427	ENSRBIG00000029622	ZMAT3	96	60.068	Rhinopithecus_bieti
ENSSMAG00000019540	-	55	64.173	ENSRROG00000038345	ZMAT3	96	59.864	Rhinopithecus_roxellana
ENSSMAG00000019540	-	53	64.854	ENSSBOG00000033332	ZMAT3	80	65.432	Saimiri_boliviensis_boliviensis
ENSSMAG00000019540	-	53	63.750	ENSSHAG00000016154	ZMAT3	79	62.500	Sarcophilus_harrisii
ENSSMAG00000019540	-	53	71.784	ENSSFOG00015006984	zmat3	78	69.583	Scleropages_formosus
ENSSMAG00000019540	-	74	86.905	ENSSDUG00000016188	zmat3	100	81.844	Seriola_dumerili
ENSSMAG00000019540	-	99	91.886	ENSSLDG00000018611	zmat3	92	89.912	Seriola_lalandi_dorsalis
ENSSMAG00000019540	-	51	65.546	ENSSPUG00000014753	ZMAT3	79	65.812	Sphenodon_punctatus
ENSSMAG00000019540	-	73	84.242	ENSSPAG00000011062	zmat3	97	84.472	Stegastes_partitus
ENSSMAG00000019540	-	53	66.667	ENSSSCG00000033860	ZMAT3	80	66.667	Sus_scrofa
ENSSMAG00000019540	-	51	66.116	ENSTGUG00000010765	-	96	58.000	Taeniopygia_guttata
ENSSMAG00000019540	-	54	86.122	ENSTRUG00000004788	zmat3	96	79.021	Takifugu_rubripes
ENSSMAG00000019540	-	61	81.949	ENSTNIG00000006781	zmat3	98	81.625	Tetraodon_nigroviridis
ENSSMAG00000019540	-	53	63.750	ENSTTRG00000004923	ZMAT3	80	63.750	Tursiops_truncatus
ENSSMAG00000019540	-	67	57.643	ENSUAMG00000007623	ZMAT3	80	65.984	Ursus_americanus
ENSSMAG00000019540	-	67	57.827	ENSUMAG00000007847	ZMAT3	80	66.255	Ursus_maritimus
ENSSMAG00000019540	-	53	65.574	ENSVPAG00000006611	ZMAT3	80	65.574	Vicugna_pacos
ENSSMAG00000019540	-	67	58.065	ENSVVUG00000004729	ZMAT3	80	67.500	Vulpes_vulpes
ENSSMAG00000019540	-	67	52.751	ENSXETG00000007251	zmat3	89	57.353	Xenopus_tropicalis
ENSSMAG00000019540	-	61	79.505	ENSXCOG00000008397	zmat3	98	79.505	Xiphophorus_couchianus
ENSSMAG00000019540	-	99	77.851	ENSXMAG00000015188	zmat3	92	77.483	Xiphophorus_maculatus