EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000019621 (Gene tree)
Gene ID
-
Gene Symbol
atxn1b
Alias
atxn1|atxn1a
Full Name
ataxin 1b
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
16120 bases
Position
chr1:20642457-20658576
Accession
ZDB-GENE-061218-2
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000032028AXHPF08517.127.7e-4111
ENSSMAP00000032034AXHPF08517.127.7e-4111
ENSSMAP00000032039AXHPF08517.127.7e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000032433-3491-ENSSMAP00000032039831 (aa)--
ENSSMAT00000032428-3181-ENSSMAP00000032034831 (aa)--
ENSSMAT00000032422-3911-ENSSMAP00000032028831 (aa)--
Gene Model
Click here to download ENSSMAG00000019621's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019621's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000019621atxn1b5147.872ENSSMAG00000007731atxn1a9439.140
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000019621atxn1b9936.667ENSG00000124788ATXN19936.695Homo_sapiens
ENSSMAG00000019621atxn1b10084.431ENSAPOG00000005003atxn1b10084.551Acanthochromis_polyacanthus
ENSSMAG00000019621atxn1b9938.184ENSAMEG00000004299ATXN19938.277Ailuropoda_melanoleuca
ENSSMAG00000019621atxn1b8475.000ENSACIG00000016088atxn1a9775.000Amphilophus_citrinellus
ENSSMAG00000019621atxn1b10072.062ENSACIG00000014661atxn1b10071.823Amphilophus_citrinellus
ENSSMAG00000019621atxn1b8042.639ENSAOCG00000015796atxn1a9940.134Amphiprion_ocellaris
ENSSMAG00000019621atxn1b10084.311ENSAOCG00000019715atxn1b10084.431Amphiprion_ocellaris
ENSSMAG00000019621atxn1b10084.311ENSAPEG00000022436atxn1b10084.431Amphiprion_percula
ENSSMAG00000019621atxn1b8042.361ENSAPEG00000011313atxn1a9939.956Amphiprion_percula
ENSSMAG00000019621atxn1b8042.399ENSATEG00000013601atxn1a9940.614Anabas_testudineus
ENSSMAG00000019621atxn1b10084.892ENSATEG00000002982atxn1b10084.652Anabas_testudineus
ENSSMAG00000019621atxn1b9937.736ENSACAG00000003919ATXN19937.361Anolis_carolinensis
ENSSMAG00000019621atxn1b9837.844ENSANAG00000025206-9537.927Aotus_nancymaae
ENSSMAG00000019621atxn1b7535.644ENSANAG00000025424-9635.461Aotus_nancymaae
ENSSMAG00000019621atxn1b10082.374ENSACLG00000005697atxn1b10082.614Astatotilapia_calliptera
ENSSMAG00000019621atxn1b9939.411ENSACLG00000015429atxn1a9939.864Astatotilapia_calliptera
ENSSMAG00000019621atxn1b9940.181ENSAMXG00000042368atxn1a9941.324Astyanax_mexicanus
ENSSMAG00000019621atxn1b9841.145ENSAMXG00000017432atxn1b9840.285Astyanax_mexicanus
ENSSMAG00000019621atxn1b9938.495ENSBTAG00000019675ATXN19938.562Bos_taurus
ENSSMAG00000019621atxn1b9837.844ENSCJAG00000006563ATXN19337.927Callithrix_jacchus
ENSSMAG00000019621atxn1b9938.681ENSCAFG00000009934ATXN19939.022Canis_familiaris
ENSSMAG00000019621atxn1b9838.411ENSCAFG00020012647ATXN19538.979Canis_lupus_dingo
ENSSMAG00000019621atxn1b9938.200ENSCHIG00000018697ATXN19938.319Capra_hircus
ENSSMAG00000019621atxn1b6250.347ENSTSYG00000000858ATXN19945.161Carlito_syrichta
ENSSMAG00000019621atxn1b9938.300ENSCAPG00000013095ATXN19938.216Cavia_aperea
ENSSMAG00000019621atxn1b9938.685ENSCPOG00000022869ATXN19938.667Cavia_porcellus
ENSSMAG00000019621atxn1b9937.870ENSCCAG00000018590ATXN19937.954Cebus_capucinus
ENSSMAG00000019621atxn1b9937.432ENSCATG00000042777ATXN19937.336Cercocebus_atys
ENSSMAG00000019621atxn1b9938.907ENSCLAG00000002212ATXN19938.889Chinchilla_lanigera
ENSSMAG00000019621atxn1b9937.514ENSCSAG00000007589ATXN19937.418Chlorocebus_sabaeus
ENSSMAG00000019621atxn1b9938.186ENSCPBG00000022373ATXN19938.307Chrysemys_picta_bellii
ENSSMAG00000019621atxn1b9937.678ENSCANG00000033673ATXN19937.859Colobus_angolensis_palliatus
ENSSMAG00000019621atxn1b9938.538ENSCGRG00001022108Atxn19938.317Cricetulus_griseus_chok1gshd
ENSSMAG00000019621atxn1b9938.746ENSCGRG00000014084Atxn19938.659Cricetulus_griseus_crigri
ENSSMAG00000019621atxn1b6544.041ENSCSEG00000017647atxn1a9938.728Cynoglossus_semilaevis
ENSSMAG00000019621atxn1b10080.746ENSCSEG00000004666atxn1b10080.746Cynoglossus_semilaevis
ENSSMAG00000019621atxn1b9938.895ENSCVAG00000023240atxn1a9938.933Cyprinodon_variegatus
ENSSMAG00000019621atxn1b10077.419ENSCVAG00000010945atxn1b10077.419Cyprinodon_variegatus
ENSSMAG00000019621atxn1b9940.289ENSDARG00000061687atxn1a9941.348Danio_rerio
ENSSMAG00000019621atxn1b9942.793ENSDARG00000060862atxn1b9942.175Danio_rerio
ENSSMAG00000019621atxn1b7845.070ENSDNOG00000048471ATXN18746.497Dasypus_novemcinctus
ENSSMAG00000019621atxn1b9937.186ENSDORG00000005940Atxn19936.871Dipodomys_ordii
ENSSMAG00000019621atxn1b8242.991ENSETEG00000003815ATXN18744.595Echinops_telfairi
ENSSMAG00000019621atxn1b9938.487ENSEASG00005011799ATXN19938.767Equus_asinus_asinus
ENSSMAG00000019621atxn1b9938.487ENSECAG00000009251ATXN19938.816Equus_caballus
ENSSMAG00000019621atxn1b9938.920ENSEEUG00000007120ATXN19938.232Erinaceus_europaeus
ENSSMAG00000019621atxn1b9757.992ENSELUG00000001311atxn1b8458.028Esox_lucius
ENSSMAG00000019621atxn1b9836.997ENSELUG00000003691atxn1a9636.461Esox_lucius
ENSSMAG00000019621atxn1b9937.597ENSFCAG00000011298ATXN19937.847Felis_catus
ENSSMAG00000019621atxn1b9939.330ENSFALG00000013400ATXN19939.444Ficedula_albicollis
ENSSMAG00000019621atxn1b8743.830ENSFDAG00000020905ATXN19936.332Fukomys_damarensis
ENSSMAG00000019621atxn1b10078.256ENSFHEG00000017226atxn1b10078.375Fundulus_heteroclitus
ENSSMAG00000019621atxn1b9938.958ENSFHEG00000019419atxn1a9938.235Fundulus_heteroclitus
ENSSMAG00000019621atxn1b9958.284ENSGMOG00000013508atxn1b10057.569Gadus_morhua
ENSSMAG00000019621atxn1b9940.022ENSGALG00000012709ATXN19939.888Gallus_gallus
ENSSMAG00000019621atxn1b9938.401ENSGAFG00000010544atxn1a9937.514Gambusia_affinis
ENSSMAG00000019621atxn1b10077.365ENSGAFG00000007295atxn1b10078.323Gambusia_affinis
ENSSMAG00000019621atxn1b8471.111ENSGACG00000003472atxn1a9937.716Gasterosteus_aculeatus
ENSSMAG00000019621atxn1b9973.035ENSGACG00000008747atxn1b10073.245Gasterosteus_aculeatus
ENSSMAG00000019621atxn1b9938.298ENSGAGG00000006868ATXN19937.973Gopherus_agassizii
ENSSMAG00000019621atxn1b9936.876ENSGGOG00000004169ATXN19936.836Gorilla_gorilla
ENSSMAG00000019621atxn1b10082.374ENSHBUG00000016081atxn1b10082.614Haplochromis_burtoni
ENSSMAG00000019621atxn1b9939.864ENSHBUG00000002508atxn1a9939.977Haplochromis_burtoni
ENSSMAG00000019621atxn1b9939.890ENSHGLG00000009360ATXN19939.468Heterocephalus_glaber_female
ENSSMAG00000019621atxn1b9939.912ENSHGLG00100003038ATXN19939.381Heterocephalus_glaber_male
ENSSMAG00000019621atxn1b8741.304ENSHCOG00000019032atxn1a9940.000Hippocampus_comes
ENSSMAG00000019621atxn1b9974.368ENSHCOG00000014835atxn1b9974.609Hippocampus_comes
ENSSMAG00000019621atxn1b9943.938ENSIPUG00000002088atxn1b10042.576Ictalurus_punctatus
ENSSMAG00000019621atxn1b8567.347ENSIPUG00000001402atxn19067.347Ictalurus_punctatus
ENSSMAG00000019621atxn1b9938.274ENSSTOG00000025423ATXN19938.300Ictidomys_tridecemlineatus
ENSSMAG00000019621atxn1b9938.255ENSJJAG00000000377Atxn19938.350Jaculus_jaculus
ENSSMAG00000019621atxn1b9978.935ENSKMAG00000013507atxn1b10078.935Kryptolebias_marmoratus
ENSSMAG00000019621atxn1b9939.545ENSKMAG00000007216atxn1a9938.757Kryptolebias_marmoratus
ENSSMAG00000019621atxn1b10082.100ENSLBEG00000024264atxn1b10081.862Labrus_bergylta
ENSSMAG00000019621atxn1b9938.322ENSLBEG00000024388atxn1a9939.706Labrus_bergylta
ENSSMAG00000019621atxn1b9938.591ENSLACG00000005371ATXN19938.453Latimeria_chalumnae
ENSSMAG00000019621atxn1b9160.656ENSLOCG00000002910atxn1a9560.656Lepisosteus_oculatus
ENSSMAG00000019621atxn1b9938.011ENSLAFG00000015231ATXN19937.652Loxodonta_africana
ENSSMAG00000019621atxn1b9937.351ENSMFAG00000032779ATXN19937.255Macaca_fascicularis
ENSSMAG00000019621atxn1b9937.283ENSMMUG00000002940ATXN19937.255Macaca_mulatta
ENSSMAG00000019621atxn1b9937.364ENSMNEG00000036667ATXN19937.610Macaca_nemestrina
ENSSMAG00000019621atxn1b7638.971ENSMLEG00000040480ATXN19738.275Mandrillus_leucophaeus
ENSSMAG00000019621atxn1b10084.772ENSMAMG00000011503atxn1b10084.532Mastacembelus_armatus
ENSSMAG00000019621atxn1b9939.474ENSMAMG00000014004atxn1a9940.535Mastacembelus_armatus
ENSSMAG00000019621atxn1b9939.411ENSMZEG00005003602atxn1a9939.864Maylandia_zebra
ENSSMAG00000019621atxn1b10082.254ENSMZEG00005015064atxn1b10082.494Maylandia_zebra
ENSSMAG00000019621atxn1b9939.333ENSMGAG00000003028ATXN19938.989Meleagris_gallopavo
ENSSMAG00000019621atxn1b9939.310ENSMAUG00000011491Atxn19939.111Mesocricetus_auratus
ENSSMAG00000019621atxn1b9938.079ENSMICG00000011875ATXN19938.258Microcebus_murinus
ENSSMAG00000019621atxn1b9939.218ENSMOCG00000001527Atxn19938.728Microtus_ochrogaster
ENSSMAG00000019621atxn1b9478.992ENSMMOG00000002884atxn1b10079.012Mola_mola
ENSSMAG00000019621atxn1b8764.912ENSMMOG00000018593atxn1a9939.183Mola_mola
ENSSMAG00000019621atxn1b9938.436ENSMODG00000010827ATXN19937.651Monodelphis_domestica
ENSSMAG00000019621atxn1b9985.697ENSMALG00000012137atxn1b10085.939Monopterus_albus
ENSSMAG00000019621atxn1b8668.000ENSMALG00000005209atxn1a9940.248Monopterus_albus
ENSSMAG00000019621atxn1b9938.951MGP_CAROLIEiJ_G0018479Atxn19938.393Mus_caroli
ENSSMAG00000019621atxn1b9938.994ENSMUSG00000046876Atxn19938.436Mus_musculus
ENSSMAG00000019621atxn1b9939.038MGP_PahariEiJ_G0019546Atxn19938.170Mus_pahari
ENSSMAG00000019621atxn1b9939.465MGP_SPRETEiJ_G0019357Atxn19938.547Mus_spretus
ENSSMAG00000019621atxn1b9938.268ENSMPUG00000005398ATXN19938.950Mustela_putorius_furo
ENSSMAG00000019621atxn1b9939.583ENSMLUG00000000896ATXN19938.895Myotis_lucifugus
ENSSMAG00000019621atxn1b9938.513ENSNGAG00000020481Atxn19938.624Nannospalax_galili
ENSSMAG00000019621atxn1b9939.977ENSNBRG00000013216atxn1a9939.977Neolamprologus_brichardi
ENSSMAG00000019621atxn1b10072.902ENSNBRG00000014776atxn1b10072.902Neolamprologus_brichardi
ENSSMAG00000019621atxn1b9937.541ENSNLEG00000001064ATXN19937.445Nomascus_leucogenys
ENSSMAG00000019621atxn1b9837.264ENSMEUG00000014680ATXN19636.475Notamacropus_eugenii
ENSSMAG00000019621atxn1b9938.064ENSODEG00000006297ATXN19938.385Octodon_degus
ENSSMAG00000019621atxn1b10082.854ENSONIG00000003094atxn1b10083.094Oreochromis_niloticus
ENSSMAG00000019621atxn1b8932.611ENSOANG00000011866ATXN19532.805Ornithorhynchus_anatinus
ENSSMAG00000019621atxn1b9938.274ENSOCUG00000015360ATXN19938.258Oryctolagus_cuniculus
ENSSMAG00000019621atxn1b9936.771ENSORLG00000013003atxn1a9937.168Oryzias_latipes
ENSSMAG00000019621atxn1b10078.323ENSORLG00000008288atxn1b10078.443Oryzias_latipes
ENSSMAG00000019621atxn1b9936.591ENSORLG00020006722atxn1a9936.538Oryzias_latipes_hni
ENSSMAG00000019621atxn1b10078.136ENSORLG00020013514atxn1b10078.136Oryzias_latipes_hni
ENSSMAG00000019621atxn1b9937.062ENSORLG00015014668atxn1a9936.670Oryzias_latipes_hsok
ENSSMAG00000019621atxn1b10078.204ENSORLG00015019876atxn1b10078.204Oryzias_latipes_hsok
ENSSMAG00000019621atxn1b9938.732ENSOMEG00000012883atxn1a9838.392Oryzias_melastigma
ENSSMAG00000019621atxn1b10078.563ENSOMEG00000003259atxn1b10078.563Oryzias_melastigma
ENSSMAG00000019621atxn1b9938.564ENSOGAG00000028623ATXN110038.095Otolemur_garnettii
ENSSMAG00000019621atxn1b7140.775ENSOARG00000012141ATXN17540.305Ovis_aries
ENSSMAG00000019621atxn1b9936.785ENSPPAG00000028993ATXN19936.814Pan_paniscus
ENSSMAG00000019621atxn1b9938.288ENSPPRG00000004547ATXN19937.399Panthera_pardus
ENSSMAG00000019621atxn1b9936.905ENSPTRG00000039250ATXN19936.933Pan_troglodytes
ENSSMAG00000019621atxn1b9937.323ENSPANG00000024249ATXN19937.296Papio_anubis
ENSSMAG00000019621atxn1b9944.855ENSPKIG00000018323atxn1b9945.747Paramormyrops_kingsleyae
ENSSMAG00000019621atxn1b7236.499ENSPSIG00000007158ATXN19235.546Pelodiscus_sinensis
ENSSMAG00000019621atxn1b6774.844ENSPMGG00000013610atxn1b9973.071Periophthalmus_magnuspinnatus
ENSSMAG00000019621atxn1b6567.391ENSPMGG00000022926atxn1a6267.391Periophthalmus_magnuspinnatus
ENSSMAG00000019621atxn1b9939.306ENSPEMG00000014930Atxn19938.994Peromyscus_maniculatus_bairdii
ENSSMAG00000019621atxn1b9938.564ENSPCIG00000019413ATXN19938.064Phascolarctos_cinereus
ENSSMAG00000019621atxn1b8040.111ENSPFOG00000014422atxn1a9937.856Poecilia_formosa
ENSSMAG00000019621atxn1b8568.293ENSPLAG00000018978atxn1a9572.000Poecilia_latipinna
ENSSMAG00000019621atxn1b10078.589ENSPLAG00000018703atxn1b10078.589Poecilia_latipinna
ENSSMAG00000019621atxn1b9938.908ENSPMEG00000002647atxn1a9938.259Poecilia_mexicana
ENSSMAG00000019621atxn1b10078.230ENSPMEG00000023723atxn1b10078.230Poecilia_mexicana
ENSSMAG00000019621atxn1b10078.469ENSPREG00000020308atxn1b10078.469Poecilia_reticulata
ENSSMAG00000019621atxn1b8040.417ENSPREG00000008333atxn1a9937.627Poecilia_reticulata
ENSSMAG00000019621atxn1b9936.814ENSPPYG00000016254ATXN19936.677Pongo_abelii
ENSSMAG00000019621atxn1b6648.913ENSPCAG00000008196ATXN16548.727Procavia_capensis
ENSSMAG00000019621atxn1b9938.411ENSPCOG00000013612ATXN19938.479Propithecus_coquereli
ENSSMAG00000019621atxn1b8938.792ENSPVAG00000016937ATXN19635.809Pteropus_vampyrus
ENSSMAG00000019621atxn1b9939.614ENSPNYG00000011920atxn1a9939.751Pundamilia_nyererei
ENSSMAG00000019621atxn1b10073.022ENSPNYG00000017095atxn1b10073.022Pundamilia_nyererei
ENSSMAG00000019621atxn1b9942.257ENSPNAG00000001226atxn1b10041.087Pygocentrus_nattereri
ENSSMAG00000019621atxn1b9941.441ENSPNAG00000010587atxn1a9941.695Pygocentrus_nattereri
ENSSMAG00000019621atxn1b9939.512ENSRNOG00000016998Atxn19938.839Rattus_norvegicus
ENSSMAG00000019621atxn1b9937.310ENSRBIG00000028213ATXN19937.174Rhinopithecus_bieti
ENSSMAG00000019621atxn1b9937.514ENSRROG00000032751ATXN19937.377Rhinopithecus_roxellana
ENSSMAG00000019621atxn1b9937.980ENSSBOG00000017381-9937.954Saimiri_boliviensis_boliviensis
ENSSMAG00000019621atxn1b7434.175ENSSBOG00000030307-9133.627Saimiri_boliviensis_boliviensis
ENSSMAG00000019621atxn1b9943.651ENSSFOG00015000179atxn1b9943.537Scleropages_formosus
ENSSMAG00000019621atxn1b9942.037ENSSFOG00015005189atxn19941.427Scleropages_formosus
ENSSMAG00000019621atxn1b8571.111ENSSDUG00000011376atxn1a9940.708Seriola_dumerili
ENSSMAG00000019621atxn1b10089.448ENSSDUG00000006990atxn1b10089.808Seriola_dumerili
ENSSMAG00000019621atxn1b8571.111ENSSLDG00000013505atxn1a9940.376Seriola_lalandi_dorsalis
ENSSMAG00000019621atxn1b10089.568ENSSLDG00000016306atxn1b10089.928Seriola_lalandi_dorsalis
ENSSMAG00000019621atxn1b9938.384ENSSPUG00000016650ATXN19938.058Sphenodon_punctatus
ENSSMAG00000019621atxn1b10085.868ENSSPAG00000003388atxn1b10085.988Stegastes_partitus
ENSSMAG00000019621atxn1b8575.556ENSSPAG00000019849atxn1a9939.711Stegastes_partitus
ENSSMAG00000019621atxn1b9937.742ENSSSCG00000001065ATXN19937.703Sus_scrofa
ENSSMAG00000019621atxn1b9937.823ENSTGUG00000005986ATXN19937.835Taeniopygia_guttata
ENSSMAG00000019621atxn1b9975.060ENSTRUG00000024789atxn1b9974.700Takifugu_rubripes
ENSSMAG00000019621atxn1b9939.616ENSTRUG00000014645atxn1a9939.732Takifugu_rubripes
ENSSMAG00000019621atxn1b9971.567ENSTNIG00000018398atxn1b9971.567Tetraodon_nigroviridis
ENSSMAG00000019621atxn1b9939.576ENSTNIG00000005089atxn1a9939.777Tetraodon_nigroviridis
ENSSMAG00000019621atxn1b9838.106ENSTTRG00000014678ATXN19638.232Tursiops_truncatus
ENSSMAG00000019621atxn1b9937.527ENSUAMG00000004064ATXN19937.405Ursus_americanus
ENSSMAG00000019621atxn1b5242.418ENSUMAG00000017635-9243.902Ursus_maritimus
ENSSMAG00000019621atxn1b9938.261ENSVVUG00000003386ATXN19938.829Vulpes_vulpes
ENSSMAG00000019621atxn1b9935.771ENSXETG00000014184atxn19935.946Xenopus_tropicalis
ENSSMAG00000019621atxn1b8569.565ENSXCOG00000020061atxn1a9369.565Xiphophorus_couchianus
ENSSMAG00000019621atxn1b9079.507ENSXCOG00000019714atxn1b9978.971Xiphophorus_couchianus
ENSSMAG00000019621atxn1b8394.872ENSXMAG00000014270atxn1b10078.708Xiphophorus_maculatus
ENSSMAG00000019621atxn1b8140.108ENSXMAG00000003615atxn1a9938.122Xiphophorus_maculatus

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