EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019728 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6315 bases
Position: chr20:14920411-14926725
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000032213	RRM_1	PF00076.22	1.6e-31	1	2
ENSSMAP00000032213	RRM_1	PF00076.22	1.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000032609	-	3019	-	ENSSMAP00000032213	323 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000019728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019728	srsf5b	61	71.357	ENSSMAG00000010899	srsf5a	66	70.792
ENSSMAG00000019728	srsf5b	63	48.214	ENSSMAG00000014819	-	85	48.058
ENSSMAG00000019728	srsf5b	77	55.777	ENSSMAG00000017447	-	54	59.067
ENSSMAG00000019728	srsf5b	58	36.788	ENSSMAG00000002039	srsf9	65	38.860
ENSSMAG00000019728	srsf5b	56	45.699	ENSSMAG00000009719	-	65	42.188
ENSSMAG00000019728	srsf5b	56	43.548	ENSSMAG00000007018	-	64	40.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019728	srsf5b	61	79.695	ENSG00000100650	SRSF5	98	70.213	Homo_sapiens
ENSSMAG00000019728	srsf5b	91	84.797	ENSAPOG00000008642	srsf5b	93	84.000	Acanthochromis_polyacanthus
ENSSMAG00000019728	srsf5b	61	79.695	ENSAMEG00000014574	SRSF5	67	77.723	Ailuropoda_melanoleuca
ENSSMAG00000019728	srsf5b	91	83.557	ENSACIG00000010742	srsf5b	93	83.056	Amphilophus_citrinellus
ENSSMAG00000019728	srsf5b	91	84.459	ENSAOCG00000005719	srsf5b	93	83.667	Amphiprion_ocellaris
ENSSMAG00000019728	srsf5b	91	84.459	ENSAPEG00000007830	srsf5b	93	83.667	Amphiprion_percula
ENSSMAG00000019728	srsf5b	91	84.228	ENSATEG00000019112	srsf5b	93	83.444	Anabas_testudineus
ENSSMAG00000019728	srsf5b	59	78.010	ENSAPLG00000014681	SRSF5	69	75.248	Anas_platyrhynchos
ENSSMAG00000019728	srsf5b	61	80.203	ENSACAG00000005143	SRSF5	69	78.218	Anolis_carolinensis
ENSSMAG00000019728	srsf5b	61	79.695	ENSANAG00000027977	-	76	90.667	Aotus_nancymaae
ENSSMAG00000019728	srsf5b	91	83.221	ENSACLG00000026424	srsf5b	93	82.724	Astatotilapia_calliptera
ENSSMAG00000019728	srsf5b	84	76.296	ENSAMXG00000011932	srsf5b	84	82.979	Astyanax_mexicanus
ENSSMAG00000019728	srsf5b	61	79.695	ENSBTAG00000011596	SRSF5	67	77.723	Bos_taurus
ENSSMAG00000019728	srsf5b	61	79.695	ENSCJAG00000014884	SRSF5	76	90.667	Callithrix_jacchus
ENSSMAG00000019728	srsf5b	61	79.695	ENSCAFG00000016589	SRSF5	67	77.723	Canis_familiaris
ENSSMAG00000019728	srsf5b	61	79.695	ENSCAFG00020005661	SRSF5	67	77.723	Canis_lupus_dingo
ENSSMAG00000019728	srsf5b	61	79.695	ENSCHIG00000016794	SRSF5	66	77.723	Capra_hircus
ENSSMAG00000019728	srsf5b	61	79.695	ENSTSYG00000007786	SRSF5	76	90.667	Carlito_syrichta
ENSSMAG00000019728	srsf5b	61	79.695	ENSCAPG00000008801	SRSF5	66	77.723	Cavia_aperea
ENSSMAG00000019728	srsf5b	61	79.695	ENSCPOG00000039926	SRSF5	66	77.723	Cavia_porcellus
ENSSMAG00000019728	srsf5b	61	79.695	ENSCCAG00000029002	SRSF5	76	90.667	Cebus_capucinus
ENSSMAG00000019728	srsf5b	61	79.695	ENSCATG00000045051	SRSF5	76	90.667	Cercocebus_atys
ENSSMAG00000019728	srsf5b	61	79.695	ENSCLAG00000004755	SRSF5	67	77.723	Chinchilla_lanigera
ENSSMAG00000019728	srsf5b	61	79.695	ENSCSAG00000013041	SRSF5	67	77.723	Chlorocebus_sabaeus
ENSSMAG00000019728	srsf5b	61	80.203	ENSCPBG00000021653	SRSF5	68	78.218	Chrysemys_picta_bellii
ENSSMAG00000019728	srsf5b	61	79.695	ENSCANG00000030560	SRSF5	76	90.667	Colobus_angolensis_palliatus
ENSSMAG00000019728	srsf5b	61	79.695	ENSCGRG00001015339	Srsf5	68	77.723	Cricetulus_griseus_chok1gshd
ENSSMAG00000019728	srsf5b	61	79.695	ENSCGRG00000009833	Srsf5	68	77.723	Cricetulus_griseus_crigri
ENSSMAG00000019728	srsf5b	80	88.760	ENSCSEG00000003801	srsf5b	91	82.313	Cynoglossus_semilaevis
ENSSMAG00000019728	srsf5b	92	81.063	ENSCVAG00000017240	srsf5b	89	79.100	Cyprinodon_variegatus
ENSSMAG00000019728	srsf5b	61	87.374	ENSDARG00000027734	srsf5b	90	83.688	Danio_rerio
ENSSMAG00000019728	srsf5b	61	79.695	ENSDNOG00000006160	SRSF5	68	77.723	Dasypus_novemcinctus
ENSSMAG00000019728	srsf5b	61	79.695	ENSDORG00000003989	Srsf5	68	77.723	Dipodomys_ordii
ENSSMAG00000019728	srsf5b	61	73.096	ENSETEG00000020396	SRSF5	68	73.134	Echinops_telfairi
ENSSMAG00000019728	srsf5b	62	58.937	ENSEBUG00000006229	srsf5b	76	56.164	Eptatretus_burgeri
ENSSMAG00000019728	srsf5b	61	79.695	ENSEASG00005016615	SRSF5	67	77.723	Equus_asinus_asinus
ENSSMAG00000019728	srsf5b	61	79.695	ENSECAG00000026873	SRSF5	88	70.213	Equus_caballus
ENSSMAG00000019728	srsf5b	91	74.679	ENSELUG00000019852	srsf5b	85	82.119	Esox_lucius
ENSSMAG00000019728	srsf5b	61	79.695	ENSFCAG00000008848	SRSF5	75	90.667	Felis_catus
ENSSMAG00000019728	srsf5b	61	75.127	ENSFALG00000004979	SRSF5	68	75.124	Ficedula_albicollis
ENSSMAG00000019728	srsf5b	61	79.695	ENSFDAG00000011562	SRSF5	68	77.723	Fukomys_damarensis
ENSSMAG00000019728	srsf5b	92	79.530	ENSFHEG00000009476	srsf5b	89	79.672	Fundulus_heteroclitus
ENSSMAG00000019728	srsf5b	62	79.221	ENSGMOG00000000595	srsf5b	99	79.221	Gadus_morhua
ENSSMAG00000019728	srsf5b	61	74.619	ENSGALG00000009421	SRSF5	88	66.667	Gallus_gallus
ENSSMAG00000019728	srsf5b	91	82.373	ENSGAFG00000002865	srsf5b	90	81.879	Gambusia_affinis
ENSSMAG00000019728	srsf5b	62	71.713	ENSGACG00000007834	srsf5b	86	89.362	Gasterosteus_aculeatus
ENSSMAG00000019728	srsf5b	61	80.203	ENSGAGG00000004447	SRSF5	68	78.218	Gopherus_agassizii
ENSSMAG00000019728	srsf5b	61	79.695	ENSGGOG00000016462	SRSF5	76	90.667	Gorilla_gorilla
ENSSMAG00000019728	srsf5b	91	82.886	ENSHBUG00000012462	srsf5b	93	90.780	Haplochromis_burtoni
ENSSMAG00000019728	srsf5b	61	79.188	ENSHGLG00000010147	SRSF5	67	77.228	Heterocephalus_glaber_female
ENSSMAG00000019728	srsf5b	64	78.667	ENSHGLG00100000095	-	62	80.645	Heterocephalus_glaber_male
ENSSMAG00000019728	srsf5b	61	79.188	ENSHGLG00100015328	SRSF5	67	77.228	Heterocephalus_glaber_male
ENSSMAG00000019728	srsf5b	62	83.582	ENSHCOG00000005592	srsf5b	66	83.582	Hippocampus_comes
ENSSMAG00000019728	srsf5b	61	79.695	ENSSTOG00000020672	SRSF5	67	77.723	Ictidomys_tridecemlineatus
ENSSMAG00000019728	srsf5b	61	79.695	ENSJJAG00000001688	Srsf5	67	77.723	Jaculus_jaculus
ENSSMAG00000019728	srsf5b	91	81.544	ENSKMAG00000020486	srsf5b	84	88.652	Kryptolebias_marmoratus
ENSSMAG00000019728	srsf5b	91	83.893	ENSLBEG00000013647	srsf5b	93	82.781	Labrus_bergylta
ENSSMAG00000019728	srsf5b	61	79.695	ENSLACG00000005874	SRSF5	68	79.104	Latimeria_chalumnae
ENSSMAG00000019728	srsf5b	61	80.693	ENSLOCG00000012438	srsf5b	70	79.126	Lepisosteus_oculatus
ENSSMAG00000019728	srsf5b	61	79.188	ENSLAFG00000005260	SRSF5	99	59.938	Loxodonta_africana
ENSSMAG00000019728	srsf5b	61	79.695	ENSMFAG00000002393	SRSF5	76	90.667	Macaca_fascicularis
ENSSMAG00000019728	srsf5b	61	79.695	ENSMNEG00000030872	SRSF5	76	90.667	Macaca_nemestrina
ENSSMAG00000019728	srsf5b	61	79.695	ENSMLEG00000030017	SRSF5	76	90.667	Mandrillus_leucophaeus
ENSSMAG00000019728	srsf5b	86	83.274	ENSMAMG00000002673	srsf5b	93	81.788	Mastacembelus_armatus
ENSSMAG00000019728	srsf5b	91	83.221	ENSMZEG00005003550	srsf5b	93	82.724	Maylandia_zebra
ENSSMAG00000019728	srsf5b	61	79.695	ENSMAUG00000009544	Srsf5	67	77.723	Mesocricetus_auratus
ENSSMAG00000019728	srsf5b	61	79.695	ENSMICG00000037432	-	76	90.667	Microcebus_murinus
ENSSMAG00000019728	srsf5b	61	79.695	ENSMOCG00000013134	Srsf5	67	77.723	Microtus_ochrogaster
ENSSMAG00000019728	srsf5b	61	90.404	ENSMMOG00000000137	srsf5b	93	72.727	Mola_mola
ENSSMAG00000019728	srsf5b	61	80.203	ENSMODG00000011362	SRSF5	68	78.218	Monodelphis_domestica
ENSSMAG00000019728	srsf5b	91	83.893	ENSMALG00000021875	srsf5b	93	83.113	Monopterus_albus
ENSSMAG00000019728	srsf5b	61	79.695	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSSMAG00000019728	srsf5b	61	79.695	MGP_PahariEiJ_G0029659	Srsf5	68	77.723	Mus_pahari
ENSSMAG00000019728	srsf5b	61	79.695	ENSMPUG00000007458	SRSF5	67	77.723	Mustela_putorius_furo
ENSSMAG00000019728	srsf5b	61	79.695	ENSMLUG00000011939	SRSF5	65	77.723	Myotis_lucifugus
ENSSMAG00000019728	srsf5b	61	79.695	ENSNGAG00000010073	-	67	77.723	Nannospalax_galili
ENSSMAG00000019728	srsf5b	91	80.537	ENSNBRG00000001285	srsf5b	93	82.392	Neolamprologus_brichardi
ENSSMAG00000019728	srsf5b	61	79.695	ENSNLEG00000001615	SRSF5	76	90.667	Nomascus_leucogenys
ENSSMAG00000019728	srsf5b	61	79.695	ENSOPRG00000008286	SRSF5	65	77.723	Ochotona_princeps
ENSSMAG00000019728	srsf5b	61	76.650	ENSODEG00000000700	-	69	75.743	Octodon_degus
ENSSMAG00000019728	srsf5b	61	79.695	ENSODEG00000013469	-	68	77.723	Octodon_degus
ENSSMAG00000019728	srsf5b	91	83.221	ENSONIG00000005759	srsf5b	93	82.724	Oreochromis_niloticus
ENSSMAG00000019728	srsf5b	61	76.142	ENSOANG00000013336	SRSF5	68	74.257	Ornithorhynchus_anatinus
ENSSMAG00000019728	srsf5b	61	79.695	ENSOCUG00000009274	SRSF5	66	77.723	Oryctolagus_cuniculus
ENSSMAG00000019728	srsf5b	91	71.661	ENSORLG00000029854	srsf5b	93	71.613	Oryzias_latipes
ENSSMAG00000019728	srsf5b	91	80.872	ENSORLG00015001720	srsf5b	94	79.402	Oryzias_latipes_hsok
ENSSMAG00000019728	srsf5b	92	81.940	ENSOMEG00000020690	srsf5b	67	80.268	Oryzias_melastigma
ENSSMAG00000019728	srsf5b	61	79.695	ENSOGAG00000015122	SRSF5	67	77.723	Otolemur_garnettii
ENSSMAG00000019728	srsf5b	61	79.695	ENSPPAG00000029921	SRSF5	76	90.667	Pan_paniscus
ENSSMAG00000019728	srsf5b	61	79.695	ENSPPRG00000012903	SRSF5	75	90.667	Panthera_pardus
ENSSMAG00000019728	srsf5b	61	79.695	ENSPTIG00000018589	SRSF5	75	90.667	Panthera_tigris_altaica
ENSSMAG00000019728	srsf5b	61	79.695	ENSPTRG00000006488	SRSF5	76	90.667	Pan_troglodytes
ENSSMAG00000019728	srsf5b	61	79.695	ENSPANG00000021091	SRSF5	76	90.667	Papio_anubis
ENSSMAG00000019728	srsf5b	61	79.695	ENSPEMG00000020173	Srsf5	68	77.723	Peromyscus_maniculatus_bairdii
ENSSMAG00000019728	srsf5b	63	59.314	ENSPMAG00000007790	srsf5b	68	58.654	Petromyzon_marinus
ENSSMAG00000019728	srsf5b	61	80.203	ENSPCIG00000011877	SRSF5	68	78.218	Phascolarctos_cinereus
ENSSMAG00000019728	srsf5b	91	82.373	ENSPFOG00000017700	srsf5b	90	81.879	Poecilia_formosa
ENSSMAG00000019728	srsf5b	91	82.712	ENSPLAG00000006480	srsf5b	90	82.215	Poecilia_latipinna
ENSSMAG00000019728	srsf5b	91	82.373	ENSPMEG00000012751	srsf5b	84	90.780	Poecilia_mexicana
ENSSMAG00000019728	srsf5b	91	82.373	ENSPREG00000010381	srsf5b	90	81.879	Poecilia_reticulata
ENSSMAG00000019728	srsf5b	61	79.695	ENSPPYG00000005945	SRSF5	67	77.723	Pongo_abelii
ENSSMAG00000019728	srsf5b	51	73.939	ENSPCAG00000004405	SRSF5	100	73.939	Procavia_capensis
ENSSMAG00000019728	srsf5b	61	79.695	ENSPCOG00000014442	SRSF5	88	70.213	Propithecus_coquereli
ENSSMAG00000019728	srsf5b	91	75.503	ENSPNYG00000002669	srsf5b	94	90.780	Pundamilia_nyererei
ENSSMAG00000019728	srsf5b	63	86.139	ENSPNAG00000011262	srsf5b	84	82.270	Pygocentrus_nattereri
ENSSMAG00000019728	srsf5b	61	79.695	ENSRNOG00000005513	Srsf5	68	77.723	Rattus_norvegicus
ENSSMAG00000019728	srsf5b	61	79.695	ENSRBIG00000013003	SRSF5	76	90.667	Rhinopithecus_bieti
ENSSMAG00000019728	srsf5b	61	79.695	ENSRROG00000043407	SRSF5	76	90.667	Rhinopithecus_roxellana
ENSSMAG00000019728	srsf5b	61	79.695	ENSSBOG00000030784	SRSF5	76	90.667	Saimiri_boliviensis_boliviensis
ENSSMAG00000019728	srsf5b	61	80.203	ENSSHAG00000002871	SRSF5	68	78.218	Sarcophilus_harrisii
ENSSMAG00000019728	srsf5b	89	85.172	ENSSDUG00000005766	srsf5b	92	84.828	Seriola_dumerili
ENSSMAG00000019728	srsf5b	91	84.899	ENSSLDG00000023255	srsf5b	93	84.106	Seriola_lalandi_dorsalis
ENSSMAG00000019728	srsf5b	61	78.713	ENSSPUG00000002464	SRSF5	89	68.966	Sphenodon_punctatus
ENSSMAG00000019728	srsf5b	91	84.459	ENSSPAG00000015325	srsf5b	93	83.667	Stegastes_partitus
ENSSMAG00000019728	srsf5b	61	79.695	ENSSSCG00000032583	SRSF5	67	77.723	Sus_scrofa
ENSSMAG00000019728	srsf5b	61	75.127	ENSTGUG00000011425	SRSF5	68	75.124	Taeniopygia_guttata
ENSSMAG00000019728	srsf5b	62	88.060	ENSTRUG00000017811	srsf5b	96	78.981	Takifugu_rubripes
ENSSMAG00000019728	srsf5b	92	74.916	ENSTNIG00000016411	srsf5b	95	73.579	Tetraodon_nigroviridis
ENSSMAG00000019728	srsf5b	61	77.665	ENSTBEG00000001972	SRSF5	66	75.743	Tupaia_belangeri
ENSSMAG00000019728	srsf5b	61	79.592	ENSTTRG00000003318	SRSF5	66	77.612	Tursiops_truncatus
ENSSMAG00000019728	srsf5b	61	79.695	ENSUAMG00000014184	SRSF5	67	77.723	Ursus_americanus
ENSSMAG00000019728	srsf5b	61	93.548	ENSUMAG00000009827	SRSF5	67	77.723	Ursus_maritimus
ENSSMAG00000019728	srsf5b	61	79.695	ENSVPAG00000006448	SRSF5	67	77.723	Vicugna_pacos
ENSSMAG00000019728	srsf5b	61	79.695	ENSVVUG00000003790	SRSF5	67	77.723	Vulpes_vulpes
ENSSMAG00000019728	srsf5b	62	78.500	ENSXETG00000002211	srsf5	68	75.120	Xenopus_tropicalis
ENSSMAG00000019728	srsf5b	91	74.237	ENSXCOG00000001570	srsf5b	90	79.195	Xiphophorus_couchianus
ENSSMAG00000019728	srsf5b	91	82.373	ENSXMAG00000026416	srsf5b	90	81.879	Xiphophorus_maculatus