EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSMAG00000019746 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
31441 bases
Position
chr4:5514735-5546175
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000032241tRNA_anti-codonPF01336.251.8e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000032638RPA1 (1 of many)-2012715-ENSSMAP00000032241661 (aa)--
Gene Model
Click here to download ENSSMAG00000019746's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019746's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000019746RPA18370.320ENSAPOG00000011658rpa19370.320Acanthochromis_polyacanthus
ENSSMAG00000019746RPA110075.360ENSAPOG00000019409RPA110075.543Acanthochromis_polyacanthus
ENSSMAG00000019746RPA19853.005ENSAMEG00000007706RPA19752.851Ailuropoda_melanoleuca
ENSSMAG00000019746RPA19676.378ENSACIG00000012881RPA19976.063Amphilophus_citrinellus
ENSSMAG00000019746RPA19650.469ENSACIG00000007277rpa19950.469Amphilophus_citrinellus
ENSSMAG00000019746RPA19958.079ENSAOCG00000023376rpa19370.709Amphiprion_ocellaris
ENSSMAG00000019746RPA110077.410ENSAOCG00000009003RPA110077.280Amphiprion_ocellaris
ENSSMAG00000019746RPA110079.217ENSAPEG00000019132RPA110079.073Amphiprion_percula
ENSSMAG00000019746RPA19956.860ENSAPEG00000008634rpa19958.240Amphiprion_percula
ENSSMAG00000019746RPA19557.302ENSATEG00000022024rpa19370.522Anabas_testudineus
ENSSMAG00000019746RPA110079.456ENSATEG00000006443RPA110079.154Anabas_testudineus
ENSSMAG00000019746RPA19846.207ENSAPLG00000012442RPA110045.655Anas_platyrhynchos
ENSSMAG00000019746RPA18561.050ENSACAG00000014490RPA19561.050Anolis_carolinensis
ENSSMAG00000019746RPA19752.804ENSANAG00000023456RPA19464.027Aotus_nancymaae
ENSSMAG00000019746RPA19976.586ENSACLG00000005223RPA19976.586Astatotilapia_calliptera
ENSSMAG00000019746RPA17872.146ENSACLG00000006640rpa19372.146Astatotilapia_calliptera
ENSSMAG00000019746RPA18570.946ENSAMXG00000008418rpa19770.946Astyanax_mexicanus
ENSSMAG00000019746RPA19952.273ENSBTAG00000009711RPA19952.496Bos_taurus
ENSSMAG00000019746RPA17230.103WBGene00017546rpa-17330.103Caenorhabditis_elegans
ENSSMAG00000019746RPA18463.801ENSCJAG00000001848RPA19952.727Callithrix_jacchus
ENSSMAG00000019746RPA19952.656ENSCAFG00000019249RPA19953.263Canis_familiaris
ENSSMAG00000019746RPA19952.656ENSCAFG00020009847RPA19953.263Canis_lupus_dingo
ENSSMAG00000019746RPA19951.667ENSCHIG00000026308RPA19952.496Capra_hircus
ENSSMAG00000019746RPA19952.187ENSTSYG00000003482-9952.200Carlito_syrichta
ENSSMAG00000019746RPA19952.338ENSCPOG00000000035RPA19952.338Cavia_porcellus
ENSSMAG00000019746RPA110041.742ENSCCAG00000010981RPA19943.202Cebus_capucinus
ENSSMAG00000019746RPA19949.698ENSCLAG00000015045-9949.698Chinchilla_lanigera
ENSSMAG00000019746RPA19953.092ENSCLAG00000005185-9953.394Chinchilla_lanigera
ENSSMAG00000019746RPA19942.424ENSCSAG00000013833RPA19943.333Chlorocebus_sabaeus
ENSSMAG00000019746RPA16664.220ENSCHOG00000009454-9964.220Choloepus_hoffmanni
ENSSMAG00000019746RPA19651.567ENSCHOG00000013540-9951.654Choloepus_hoffmanni
ENSSMAG00000019746RPA19953.012ENSCPBG00000020377RPA19953.710Chrysemys_picta_bellii
ENSSMAG00000019746RPA18848.602ENSCING00000023482-9648.602Ciona_intestinalis
ENSSMAG00000019746RPA18164.027ENSCANG00000030911RPA19464.027Colobus_angolensis_palliatus
ENSSMAG00000019746RPA19952.511ENSCGRG00001008197Rpa19952.664Cricetulus_griseus_chok1gshd
ENSSMAG00000019746RPA16664.220ENSCGRG00000000582Rpa18564.220Cricetulus_griseus_crigri
ENSSMAG00000019746RPA110067.020ENSCSEG00000012726RPA19967.585Cynoglossus_semilaevis
ENSSMAG00000019746RPA19956.925ENSCSEG00000013066rpa19169.615Cynoglossus_semilaevis
ENSSMAG00000019746RPA18568.374ENSCVAG00000019431rpa19368.374Cyprinodon_variegatus
ENSSMAG00000019746RPA19673.538ENSCVAG00000013446-9673.385Cyprinodon_variegatus
ENSSMAG00000019746RPA110057.640ENSDARG00000003938rpa19371.171Danio_rerio
ENSSMAG00000019746RPA19951.756ENSDNOG00000017218RPA19851.908Dasypus_novemcinctus
ENSSMAG00000019746RPA19953.021ENSDORG00000006199Rpa19953.111Dipodomys_ordii
ENSSMAG00000019746RPA19341.772FBgn0010173RpA-709842.405Drosophila_melanogaster
ENSSMAG00000019746RPA18464.948ENSETEG00000017608RPA18264.948Echinops_telfairi
ENSSMAG00000019746RPA19751.926ENSEASG00005009372RPA19562.955Equus_asinus_asinus
ENSSMAG00000019746RPA19952.115ENSECAG00000023886RPA19951.897Equus_caballus
ENSSMAG00000019746RPA16363.246ENSEEUG00000002186-6863.246Erinaceus_europaeus
ENSSMAG00000019746RPA110058.912ENSELUG00000021071rpa19958.006Esox_lucius
ENSSMAG00000019746RPA16373.861ENSELUG00000006136RPA19273.861Esox_lucius
ENSSMAG00000019746RPA19953.021ENSFCAG00000006306RPA19953.111Felis_catus
ENSSMAG00000019746RPA19952.560ENSFALG00000006575RPA19952.410Ficedula_albicollis
ENSSMAG00000019746RPA19952.941ENSFDAG00000007720RPA19952.640Fukomys_damarensis
ENSSMAG00000019746RPA19957.230ENSFHEG00000003580rpa19957.230Fundulus_heteroclitus
ENSSMAG00000019746RPA18969.545ENSGMOG00000010382rpa19969.545Gadus_morhua
ENSSMAG00000019746RPA19952.568ENSGALG00000003072RPA19952.568Gallus_gallus
ENSSMAG00000019746RPA19975.264ENSGAFG00000020953RPA19974.962Gambusia_affinis
ENSSMAG00000019746RPA19955.319ENSGAFG00000012916rpa19068.192Gambusia_affinis
ENSSMAG00000019746RPA19957.078ENSGACG00000010856rpa19271.132Gasterosteus_aculeatus
ENSSMAG00000019746RPA19952.861ENSGAGG00000013611RPA19952.310Gopherus_agassizii
ENSSMAG00000019746RPA18363.719ENSGGOG00000014186RPA19563.719Gorilla_gorilla
ENSSMAG00000019746RPA19662.166ENSHBUG00000009348RPA19862.166Haplochromis_burtoni
ENSSMAG00000019746RPA19957.727ENSHBUG00000017773rpa19957.686Haplochromis_burtoni
ENSSMAG00000019746RPA18465.068ENSHGLG00000008846RPA110052.941Heterocephalus_glaber_female
ENSSMAG00000019746RPA18455.606ENSHGLG00100002005-9945.289Heterocephalus_glaber_male
ENSSMAG00000019746RPA19948.718ENSHGLG00100000799-9948.718Heterocephalus_glaber_male
ENSSMAG00000019746RPA18465.068ENSHGLG00100017755-10052.941Heterocephalus_glaber_male
ENSSMAG00000019746RPA18365.604ENSHCOG00000001401rpa19954.351Hippocampus_comes
ENSSMAG00000019746RPA18954.329ENSHCOG00000000351RPA19954.329Hippocampus_comes
ENSSMAG00000019746RPA110059.304ENSIPUG00000004400rpa19959.304Ictalurus_punctatus
ENSSMAG00000019746RPA19252.202ENSSTOG00000022475RPA19352.066Ictidomys_tridecemlineatus
ENSSMAG00000019746RPA19653.678ENSJJAG00000000876Rpa19853.678Jaculus_jaculus
ENSSMAG00000019746RPA19969.848ENSKMAG00000000234RPA19970.000Kryptolebias_marmoratus
ENSSMAG00000019746RPA19952.128ENSKMAG00000005605rpa19956.383Kryptolebias_marmoratus
ENSSMAG00000019746RPA19970.780ENSLBEG00000002281RPA19971.449Labrus_bergylta
ENSSMAG00000019746RPA18769.231ENSLBEG00000021604rpa19669.231Labrus_bergylta
ENSSMAG00000019746RPA17256.936ENSLACG00000007210RPA19756.936Latimeria_chalumnae
ENSSMAG00000019746RPA110057.402ENSLOCG00000006397rpa19957.553Lepisosteus_oculatus
ENSSMAG00000019746RPA19952.259ENSLAFG00000015354RPA19952.259Loxodonta_africana
ENSSMAG00000019746RPA18349.091ENSMFAG00000036138-9950.727Macaca_fascicularis
ENSSMAG00000019746RPA19951.903ENSMMUG00000011604-9952.851Macaca_mulatta
ENSSMAG00000019746RPA19949.017ENSMMUG00000002442-9949.017Macaca_mulatta
ENSSMAG00000019746RPA19651.724ENSMNEG00000031632-9852.665Macaca_nemestrina
ENSSMAG00000019746RPA17859.685ENSMNEG00000029837-8159.685Macaca_nemestrina
ENSSMAG00000019746RPA18061.312ENSMLEG00000038768-9950.383Mandrillus_leucophaeus
ENSSMAG00000019746RPA19978.869ENSMAMG00000020097RPA19978.689Mastacembelus_armatus
ENSSMAG00000019746RPA19957.839ENSMAMG00000017993rpa19869.635Mastacembelus_armatus
ENSSMAG00000019746RPA19957.839ENSMZEG00005007551rpa18671.259Maylandia_zebra
ENSSMAG00000019746RPA19976.586ENSMZEG00005024731RPA19976.586Maylandia_zebra
ENSSMAG00000019746RPA19951.756ENSMGAG00000005315RPA19851.756Meleagris_gallopavo
ENSSMAG00000019746RPA18164.450ENSMAUG00000010474Rpa19952.941Mesocricetus_auratus
ENSSMAG00000019746RPA19952.496ENSMICG00000012867RPA19952.496Microcebus_murinus
ENSSMAG00000019746RPA19951.657ENSMOCG00000013019Rpa19951.589Microtus_ochrogaster
ENSSMAG00000019746RPA19870.968ENSMMOG00000010868RPA19584.652Mola_mola
ENSSMAG00000019746RPA19757.590ENSMMOG00000014292rpa19957.903Mola_mola
ENSSMAG00000019746RPA110053.003ENSMODG00000010549RPA19953.003Monodelphis_domestica
ENSSMAG00000019746RPA19957.099ENSMALG00000011453rpa19957.099Monopterus_albus
ENSSMAG00000019746RPA110071.646ENSMALG00000001208RPA110071.369Monopterus_albus
ENSSMAG00000019746RPA19953.120MGP_CAROLIEiJ_G0016734Rpa19952.968Mus_caroli
ENSSMAG00000019746RPA19952.816ENSMUSG00000000751Rpa19952.576Mus_musculus
ENSSMAG00000019746RPA19953.120MGP_PahariEiJ_G0017871Rpa19953.120Mus_pahari
ENSSMAG00000019746RPA19952.968MGP_SPRETEiJ_G0017577Rpa19952.879Mus_spretus
ENSSMAG00000019746RPA19952.959ENSMPUG00000013119RPA19952.417Mustela_putorius_furo
ENSSMAG00000019746RPA110052.000ENSMLUG00000006113RPA19952.083Myotis_lucifugus
ENSSMAG00000019746RPA19652.895ENSNGAG00000004522Rpa19453.218Nannospalax_galili
ENSSMAG00000019746RPA17971.689ENSNBRG00000020595rpa19371.689Neolamprologus_brichardi
ENSSMAG00000019746RPA19867.890ENSNBRG00000009672RPA19767.890Neolamprologus_brichardi
ENSSMAG00000019746RPA18363.946ENSNLEG00000017149RPA19953.414Nomascus_leucogenys
ENSSMAG00000019746RPA18962.887ENSMEUG00000006714RPA19945.763Notamacropus_eugenii
ENSSMAG00000019746RPA19653.532ENSODEG00000009038RPA19653.532Octodon_degus
ENSSMAG00000019746RPA19957.839ENSONIG00000013135rpa19958.143Oreochromis_niloticus
ENSSMAG00000019746RPA19853.067ENSOANG00000010880RPA19953.231Ornithorhynchus_anatinus
ENSSMAG00000019746RPA19951.248ENSOCUG00000001504RPA19950.954Oryctolagus_cuniculus
ENSSMAG00000019746RPA19956.732ENSORLG00000004856rpa19956.732Oryzias_latipes
ENSSMAG00000019746RPA19974.251ENSORLG00000003368RPA19973.991Oryzias_latipes
ENSSMAG00000019746RPA19956.884ENSORLG00020008980rpa19956.884Oryzias_latipes_hni
ENSSMAG00000019746RPA19974.405ENSORLG00020015284RPA19974.146Oryzias_latipes_hni
ENSSMAG00000019746RPA16581.567ENSORLG00015005867-9981.567Oryzias_latipes_hsok
ENSSMAG00000019746RPA19973.343ENSORLG00015020383RPA19973.083Oryzias_latipes_hsok
ENSSMAG00000019746RPA19956.884ENSORLG00015013982rpa19956.884Oryzias_latipes_hsok
ENSSMAG00000019746RPA19967.884ENSOMEG00000011040RPA19968.850Oryzias_melastigma
ENSSMAG00000019746RPA19955.136ENSOMEG00000004704rpa19563.431Oryzias_melastigma
ENSSMAG00000019746RPA19952.790ENSOGAG00000005581-9952.640Otolemur_garnettii
ENSSMAG00000019746RPA19845.741ENSOGAG00000029379-9945.741Otolemur_garnettii
ENSSMAG00000019746RPA19951.667ENSOARG00000014479RPA19952.496Ovis_aries
ENSSMAG00000019746RPA19951.584ENSPPAG00000039680RPA19953.111Pan_paniscus
ENSSMAG00000019746RPA19953.153ENSPPRG00000011807RPA19953.243Panthera_pardus
ENSSMAG00000019746RPA19953.323ENSPTIG00000007898RPA19953.414Panthera_tigris_altaica
ENSSMAG00000019746RPA19951.433ENSPTRG00000008539RPA19952.959Pan_troglodytes
ENSSMAG00000019746RPA110051.807ENSPANG00000024592RPA19952.879Papio_anubis
ENSSMAG00000019746RPA17973.464ENSPKIG00000008053rpa19458.889Paramormyrops_kingsleyae
ENSSMAG00000019746RPA19850.915ENSPSIG00000015617RPA19950.915Pelodiscus_sinensis
ENSSMAG00000019746RPA18170.759ENSPMGG00000011589rpa19570.759Periophthalmus_magnuspinnatus
ENSSMAG00000019746RPA110061.493ENSPMGG00000000543RPA19965.747Periophthalmus_magnuspinnatus
ENSSMAG00000019746RPA19952.273ENSPEMG00000021061Rpa19952.273Peromyscus_maniculatus_bairdii
ENSSMAG00000019746RPA18464.626ENSPCIG00000019049RPA19952.560Phascolarctos_cinereus
ENSSMAG00000019746RPA19956.079ENSPFOG00000003987rpa19956.079Poecilia_formosa
ENSSMAG00000019746RPA19573.851ENSPLAG00000008844-9773.534Poecilia_latipinna
ENSSMAG00000019746RPA19956.687ENSPLAG00000004984rpa19956.687Poecilia_latipinna
ENSSMAG00000019746RPA19574.326ENSPMEG00000003627-9774.168Poecilia_mexicana
ENSSMAG00000019746RPA19956.079ENSPMEG00000020602rpa19168.481Poecilia_mexicana
ENSSMAG00000019746RPA17961.275ENSPREG00000010174rpa18861.275Poecilia_reticulata
ENSSMAG00000019746RPA19973.060ENSPREG00000010119RPA110072.197Poecilia_reticulata
ENSSMAG00000019746RPA19952.115ENSPCOG00000001799RPA19952.115Propithecus_coquereli
ENSSMAG00000019746RPA19951.952ENSPVAG00000002149RPA19951.952Pteropus_vampyrus
ENSSMAG00000019746RPA19957.991ENSPNYG00000016316rpa19272.146Pundamilia_nyererei
ENSSMAG00000019746RPA19976.586ENSPNYG00000024165RPA19976.586Pundamilia_nyererei
ENSSMAG00000019746RPA110051.282ENSPNAG00000008599rpa19950.523Pygocentrus_nattereri
ENSSMAG00000019746RPA19759.709ENSRNOG00000003123Rpa19953.030Rattus_norvegicus
ENSSMAG00000019746RPA110052.711ENSRBIG00000036587RPA19952.410Rhinopithecus_bieti
ENSSMAG00000019746RPA110049.398ENSRROG00000043278RPA19949.398Rhinopithecus_roxellana
ENSSMAG00000019746RPA16634.685YAR007CRFA17134.685Saccharomyces_cerevisiae
ENSSMAG00000019746RPA19252.217ENSSBOG00000030233RPA19653.821Saimiri_boliviensis_boliviensis
ENSSMAG00000019746RPA19853.159ENSSHAG00000007969RPA19753.313Sarcophilus_harrisii
ENSSMAG00000019746RPA110059.063ENSSFOG00015005362rpa19272.460Scleropages_formosus
ENSSMAG00000019746RPA19958.904ENSSDUG00000011949rpa19271.847Seriola_dumerili
ENSSMAG00000019746RPA110078.971ENSSDUG00000016358RPA110079.118Seriola_dumerili
ENSSMAG00000019746RPA19958.143ENSSLDG00000011806rpa19271.396Seriola_lalandi_dorsalis
ENSSMAG00000019746RPA110077.372ENSSLDG00000020784RPA110078.248Seriola_lalandi_dorsalis
ENSSMAG00000019746RPA18869.697ENSSARG00000007506RPA18869.697Sorex_araneus
ENSSMAG00000019746RPA19748.841ENSSPUG00000007223RPA19849.533Sphenodon_punctatus
ENSSMAG00000019746RPA19956.621ENSSPAG00000009903rpa19957.078Stegastes_partitus
ENSSMAG00000019746RPA19971.933ENSSPAG00000011165RPA110070.651Stegastes_partitus
ENSSMAG00000019746RPA18563.029ENSSSCG00000017822RPA19663.029Sus_scrofa
ENSSMAG00000019746RPA19952.417ENSTGUG00000005775RPA19952.568Taeniopygia_guttata
ENSSMAG00000019746RPA19957.165ENSTRUG00000003616rpa19957.165Takifugu_rubripes
ENSSMAG00000019746RPA19968.163ENSTRUG00000000405RPA19968.303Takifugu_rubripes
ENSSMAG00000019746RPA19957.143ENSTNIG00000016199rpa19958.207Tetraodon_nigroviridis
ENSSMAG00000019746RPA16663.636ENSTBEG00000002709RPA17463.636Tupaia_belangeri
ENSSMAG00000019746RPA18363.265ENSTTRG00000001169RPA19952.273Tursiops_truncatus
ENSSMAG00000019746RPA17475.000ENSUAMG00000015676RPA19675.000Ursus_americanus
ENSSMAG00000019746RPA19951.593ENSUMAG00000009328RPA19564.318Ursus_maritimus
ENSSMAG00000019746RPA19951.360ENSVPAG00000009443RPA19951.360Vicugna_pacos
ENSSMAG00000019746RPA19953.414ENSVVUG00000021715RPA19953.414Vulpes_vulpes
ENSSMAG00000019746RPA18366.284ENSXETG00000013538rpa19954.325Xenopus_tropicalis
ENSSMAG00000019746RPA17868.382ENSXCOG00000010068rpa18868.382Xiphophorus_couchianus
ENSSMAG00000019746RPA19669.462ENSXCOG00000009899-9969.462Xiphophorus_couchianus
ENSSMAG00000019746RPA19956.991ENSXMAG00000004102rpa19956.402Xiphophorus_maculatus
ENSSMAG00000019746RPA19970.538ENSXMAG00000010333RPA19970.198Xiphophorus_maculatus

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