EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019897 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 7305 bases
Position: chr7:8103955-8111259
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000032459	RRM_1	PF00076.22	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000032859	-	2044	-	ENSSMAP00000032459	453 (aa)	-	A0A2U9BIU7

Gene Model

Click here to download ENSSMAG00000019897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019897	-	95	36.628	ENSSMAG00000011808	srek1	58	41.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019897	-	88	54.976	ENSG00000116754	SRSF11	94	63.812	Homo_sapiens
ENSSMAG00000019897	-	100	82.599	ENSAPOG00000004488	-	100	85.022	Acanthochromis_polyacanthus
ENSSMAG00000019897	-	69	83.758	ENSACIG00000018075	-	79	97.647	Amphilophus_citrinellus
ENSSMAG00000019897	-	100	82.379	ENSAPEG00000003619	SRSF11	100	84.802	Amphiprion_percula
ENSSMAG00000019897	-	100	79.167	ENSATEG00000007534	-	100	82.018	Anabas_testudineus
ENSSMAG00000019897	-	63	40.409	ENSAPLG00000003948	-	71	42.857	Anas_platyrhynchos
ENSSMAG00000019897	-	99	60.426	ENSACAG00000013654	SRSF11	99	62.979	Anolis_carolinensis
ENSSMAG00000019897	-	100	83.664	ENSACLG00000019647	-	100	82.819	Astatotilapia_calliptera
ENSSMAG00000019897	-	100	68.443	ENSAMXG00000008655	-	100	68.230	Astyanax_mexicanus
ENSSMAG00000019897	-	67	71.495	ENSCJAG00000017704	SRSF11	94	54.375	Callithrix_jacchus
ENSSMAG00000019897	-	66	71.698	ENSCHIG00000025295	SRSF11	75	76.136	Capra_hircus
ENSSMAG00000019897	-	97	75.831	ENSCSEG00000010721	-	100	76.356	Cynoglossus_semilaevis
ENSSMAG00000019897	-	100	81.360	ENSCVAG00000006934	-	100	82.675	Cyprinodon_variegatus
ENSSMAG00000019897	-	92	35.478	ENSDARG00000009764	srek1	56	41.237	Danio_rerio
ENSSMAG00000019897	-	63	49.164	ENSEBUG00000014055	srsf11	59	55.909	Eptatretus_burgeri
ENSSMAG00000019897	-	99	65.546	ENSELUG00000023887	srsf11	99	66.597	Esox_lucius
ENSSMAG00000019897	-	98	35.125	ENSELUG00000008230	srek1	53	38.754	Esox_lucius
ENSSMAG00000019897	-	100	70.886	ENSELUG00000021268	-	100	71.941	Esox_lucius
ENSSMAG00000019897	-	100	70.588	ENSFHEG00000013348	-	100	79.783	Fundulus_heteroclitus
ENSSMAG00000019897	-	100	67.238	ENSFHEG00000003732	SRSF11	100	65.310	Fundulus_heteroclitus
ENSSMAG00000019897	-	100	67.102	ENSGMOG00000002255	-	99	73.377	Gadus_morhua
ENSSMAG00000019897	-	100	59.322	ENSGMOG00000015896	srsf11	100	67.857	Gadus_morhua
ENSSMAG00000019897	-	100	80.921	ENSGAFG00000021415	SRSF11	85	82.018	Gambusia_affinis
ENSSMAG00000019897	-	100	82.112	ENSGACG00000017855	-	99	82.609	Gasterosteus_aculeatus
ENSSMAG00000019897	-	61	40.443	ENSGAGG00000006087	SREK1	62	67.901	Gopherus_agassizii
ENSSMAG00000019897	-	100	83.664	ENSHBUG00000007092	-	100	82.819	Haplochromis_burtoni
ENSSMAG00000019897	-	99	55.269	ENSHGLG00000008682	SRSF11	95	62.900	Heterocephalus_glaber_female
ENSSMAG00000019897	-	99	55.054	ENSHGLG00100018382	SRSF11	99	62.955	Heterocephalus_glaber_male
ENSSMAG00000019897	-	65	73.986	ENSHCOG00000019035	-	88	69.484	Hippocampus_comes
ENSSMAG00000019897	-	87	36.640	ENSIPUG00000016851	srek1	54	42.806	Ictalurus_punctatus
ENSSMAG00000019897	-	100	81.579	ENSKMAG00000005868	-	100	82.675	Kryptolebias_marmoratus
ENSSMAG00000019897	-	100	60.000	ENSKMAG00000009775	srsf11	100	59.539	Kryptolebias_marmoratus
ENSSMAG00000019897	-	72	81.155	ENSLBEG00000012466	-	76	81.155	Labrus_bergylta
ENSSMAG00000019897	-	100	61.407	ENSLBEG00000024167	srsf11	87	88.235	Labrus_bergylta
ENSSMAG00000019897	-	100	83.991	ENSMAMG00000015002	-	100	81.140	Mastacembelus_armatus
ENSSMAG00000019897	-	100	83.664	ENSMZEG00005025071	-	100	82.819	Maylandia_zebra
ENSSMAG00000019897	-	99	72.991	ENSMMOG00000016751	-	79	97.647	Mola_mola
ENSSMAG00000019897	-	84	36.383	ENSMALG00000017086	srek1	91	64.198	Monopterus_albus
ENSSMAG00000019897	-	100	82.159	ENSMALG00000020833	-	100	80.396	Monopterus_albus
ENSSMAG00000019897	-	99	55.864	ENSMLUG00000026338	-	94	58.974	Myotis_lucifugus
ENSSMAG00000019897	-	100	81.236	ENSNBRG00000012193	-	100	82.819	Neolamprologus_brichardi
ENSSMAG00000019897	-	56	36.697	ENSONIG00000011080	srek1	65	41.935	Oreochromis_niloticus
ENSSMAG00000019897	-	100	81.319	ENSONIG00000009591	-	100	82.675	Oreochromis_niloticus
ENSSMAG00000019897	-	99	56.745	ENSOCUG00000024114	-	96	57.265	Oryctolagus_cuniculus
ENSSMAG00000019897	-	99	55.011	ENSOCUG00000025440	-	96	58.635	Oryctolagus_cuniculus
ENSSMAG00000019897	-	100	68.737	ENSORLG00000007753	srsf11	100	68.308	Oryzias_latipes
ENSSMAG00000019897	-	87	80.759	ENSORLG00020009393	-	98	82.741	Oryzias_latipes_hni
ENSSMAG00000019897	-	100	68.017	ENSORLG00020016204	srsf11	100	67.164	Oryzias_latipes_hni
ENSSMAG00000019897	-	87	80.759	ENSORLG00015009374	-	98	82.741	Oryzias_latipes_hsok
ENSSMAG00000019897	-	100	68.017	ENSORLG00015011944	srsf11	100	67.804	Oryzias_latipes_hsok
ENSSMAG00000019897	-	100	78.337	ENSOMEG00000006172	-	100	80.963	Oryzias_melastigma
ENSSMAG00000019897	-	100	57.082	ENSOMEG00000022450	srsf11	100	66.030	Oryzias_melastigma
ENSSMAG00000019897	-	84	36.105	ENSPKIG00000025563	srek1	55	42.509	Paramormyrops_kingsleyae
ENSSMAG00000019897	-	99	59.368	ENSPCIG00000002083	SRSF11	92	64.957	Phascolarctos_cinereus
ENSSMAG00000019897	-	100	80.921	ENSPFOG00000014895	-	100	82.018	Poecilia_formosa
ENSSMAG00000019897	-	100	80.702	ENSPLAG00000009484	-	100	81.798	Poecilia_latipinna
ENSSMAG00000019897	-	100	81.140	ENSPMEG00000023453	-	100	82.237	Poecilia_mexicana
ENSSMAG00000019897	-	100	80.702	ENSPREG00000009065	SRSF11	100	81.798	Poecilia_reticulata
ENSSMAG00000019897	-	100	83.885	ENSPNYG00000014732	-	100	83.040	Pundamilia_nyererei
ENSSMAG00000019897	-	90	35.616	ENSPNAG00000004328	srek1	57	42.509	Pygocentrus_nattereri
ENSSMAG00000019897	-	99	59.789	ENSSHAG00000012111	SRSF11	98	65.598	Sarcophilus_harrisii
ENSSMAG00000019897	-	100	67.447	ENSSFOG00015014887	srsf11	100	67.660	Scleropages_formosus
ENSSMAG00000019897	-	89	35.728	ENSSFOG00015004995	srek1	53	42.857	Scleropages_formosus
ENSSMAG00000019897	-	100	87.225	ENSSDUG00000018738	-	100	86.344	Seriola_dumerili
ENSSMAG00000019897	-	86	85.714	ENSSLDG00000012105	-	97	84.694	Seriola_lalandi_dorsalis
ENSSMAG00000019897	-	100	82.599	ENSSPAG00000016483	-	100	86.564	Stegastes_partitus
ENSSMAG00000019897	-	100	59.959	ENSTRUG00000017369	srsf11	100	63.544	Takifugu_rubripes
ENSSMAG00000019897	-	99	64.819	ENSTNIG00000008514	-	100	63.090	Tetraodon_nigroviridis
ENSSMAG00000019897	-	68	39.055	ENSTNIG00000013463	srek1	71	43.262	Tetraodon_nigroviridis
ENSSMAG00000019897	-	99	56.399	ENSTTRG00000015054	SRSF11	62	66.997	Tursiops_truncatus
ENSSMAG00000019897	-	100	80.702	ENSXMAG00000019180	SRSF11	100	81.798	Xiphophorus_maculatus