EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000019903 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 38320 bases
Position: chr17:8713129-8751448
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000032542	ResIII	PF04851.15	1.1e-17	1	1
ENSSMAP00000032500	ResIII	PF04851.15	5.9e-17	1	1
ENSSMAP00000032471	ResIII	PF04851.15	6e-17	1	1
ENSSMAP00000032542	DEAD	PF00270.29	2.9e-19	1	1
ENSSMAP00000032500	DEAD	PF00270.29	2.5e-18	1	1
ENSSMAP00000032471	DEAD	PF00270.29	2.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000032906	-	6542	-	ENSSMAP00000032500	2097 (aa)	-	-
ENSSMAT00000032871	-	6608	-	ENSSMAP00000032471	2119 (aa)	-	-
ENSSMAT00000032947	-	1495	-	ENSSMAP00000032542	415 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000019903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019903	-	99	55.990	ENSG00000187790	FANCM	96	58.449	Homo_sapiens
ENSSMAG00000019903	-	100	82.692	ENSAPOG00000014274	-	97	79.730	Acanthochromis_polyacanthus
ENSSMAG00000019903	-	99	55.501	ENSAMEG00000002114	FANCM	78	55.721	Ailuropoda_melanoleuca
ENSSMAG00000019903	-	80	79.819	ENSACIG00000005444	-	96	82.063	Amphilophus_citrinellus
ENSSMAG00000019903	-	65	84.015	ENSAOCG00000005964	-	100	84.307	Amphiprion_ocellaris
ENSSMAG00000019903	-	65	84.387	ENSAPEG00000018344	-	100	84.672	Amphiprion_percula
ENSSMAG00000019903	-	100	80.964	ENSATEG00000012412	-	99	70.749	Anabas_testudineus
ENSSMAG00000019903	-	99	55.501	ENSANAG00000025075	FANCM	99	37.775	Aotus_nancymaae
ENSSMAG00000019903	-	100	81.205	ENSACLG00000016008	-	99	65.677	Astatotilapia_calliptera
ENSSMAG00000019903	-	99	63.462	ENSAMXG00000020275	-	97	44.716	Astyanax_mexicanus
ENSSMAG00000019903	-	78	63.665	ENSBTAG00000002612	FANCM	94	55.156	Bos_taurus
ENSSMAG00000019903	-	85	60.221	ENSCJAG00000015945	FANCM	91	47.666	Callithrix_jacchus
ENSSMAG00000019903	-	99	55.012	ENSCAFG00000014062	FANCM	82	48.339	Canis_familiaris
ENSSMAG00000019903	-	99	55.012	ENSCAFG00020022069	-	96	59.691	Canis_lupus_dingo
ENSSMAG00000019903	-	99	55.501	ENSCHIG00000015176	FANCM	72	55.137	Capra_hircus
ENSSMAG00000019903	-	64	71.212	ENSTSYG00000036497	-	85	67.073	Carlito_syrichta
ENSSMAG00000019903	-	99	54.034	ENSCPOG00000001446	FANCM	69	54.682	Cavia_porcellus
ENSSMAG00000019903	-	99	55.231	ENSCCAG00000026593	FANCM	99	37.568	Cebus_capucinus
ENSSMAG00000019903	-	99	55.501	ENSCATG00000031379	FANCM	82	51.452	Cercocebus_atys
ENSSMAG00000019903	-	99	55.501	ENSCSAG00000015308	FANCM	90	48.022	Chlorocebus_sabaeus
ENSSMAG00000019903	-	65	69.030	ENSCPBG00000015089	FANCM	97	45.146	Chrysemys_picta_bellii
ENSSMAG00000019903	-	65	58.736	ENSCING00000002994	-	99	59.259	Ciona_intestinalis
ENSSMAG00000019903	-	99	55.501	ENSCANG00000029498	FANCM	90	47.212	Colobus_angolensis_palliatus
ENSSMAG00000019903	-	81	60.472	ENSCGRG00001023573	Fancm	89	43.375	Cricetulus_griseus_chok1gshd
ENSSMAG00000019903	-	100	76.923	ENSCSEG00000002313	-	99	62.535	Cynoglossus_semilaevis
ENSSMAG00000019903	-	65	90.406	ENSCVAG00000015579	-	97	60.894	Cyprinodon_variegatus
ENSSMAG00000019903	-	65	74.721	ENSDARG00000112136	CABZ01079748.1	91	74.638	Danio_rerio
ENSSMAG00000019903	-	99	55.257	ENSDNOG00000007697	FANCM	82	52.947	Dasypus_novemcinctus
ENSSMAG00000019903	-	80	63.063	ENSDORG00000010095	Fancm	91	43.111	Dipodomys_ordii
ENSSMAG00000019903	-	99	51.100	ENSETEG00000003360	FANCM	53	57.229	Echinops_telfairi
ENSSMAG00000019903	-	92	53.018	ENSEBUG00000014849	-	86	52.493	Eptatretus_burgeri
ENSSMAG00000019903	-	99	55.257	ENSEASG00005007781	FANCM	91	65.545	Equus_asinus_asinus
ENSSMAG00000019903	-	99	55.746	ENSECAG00000018694	FANCM	57	54.008	Equus_caballus
ENSSMAG00000019903	-	56	53.455	ENSEEUG00000005607	-	60	53.455	Erinaceus_europaeus
ENSSMAG00000019903	-	81	73.591	ENSELUG00000015761	-	95	53.024	Esox_lucius
ENSSMAG00000019903	-	99	55.501	ENSFCAG00000022146	-	96	59.610	Felis_catus
ENSSMAG00000019903	-	99	55.122	ENSFDAG00000009043	FANCM	72	52.273	Fukomys_damarensis
ENSSMAG00000019903	-	92	75.260	ENSFHEG00000006371	-	89	82.803	Fundulus_heteroclitus
ENSSMAG00000019903	-	90	70.477	ENSGMOG00000002019	-	97	71.266	Gadus_morhua
ENSSMAG00000019903	-	63	68.077	ENSGALG00000031182	FANCM	77	55.319	Gallus_gallus
ENSSMAG00000019903	-	92	74.278	ENSGAFG00000002104	-	100	83.333	Gambusia_affinis
ENSSMAG00000019903	-	99	68.039	ENSGACG00000009448	-	99	59.933	Gasterosteus_aculeatus
ENSSMAG00000019903	-	57	68.776	ENSGAGG00000007068	-	85	51.786	Gopherus_agassizii
ENSSMAG00000019903	-	99	56.235	ENSGGOG00000008546	FANCM	90	47.846	Gorilla_gorilla
ENSSMAG00000019903	-	100	81.446	ENSHBUG00000007085	-	99	64.622	Haplochromis_burtoni
ENSSMAG00000019903	-	99	54.768	ENSHGLG00000013787	FANCM	88	48.569	Heterocephalus_glaber_female
ENSSMAG00000019903	-	99	55.012	ENSHGLG00100006377	FANCM	88	48.569	Heterocephalus_glaber_male
ENSSMAG00000019903	-	100	67.952	ENSHCOG00000013769	-	99	70.620	Hippocampus_comes
ENSSMAG00000019903	-	99	61.836	ENSIPUG00000014629	fancm	88	61.741	Ictalurus_punctatus
ENSSMAG00000019903	-	100	77.512	ENSKMAG00000009391	-	99	76.869	Kryptolebias_marmoratus
ENSSMAG00000019903	-	100	80.000	ENSLBEG00000004982	-	98	64.470	Labrus_bergylta
ENSSMAG00000019903	-	99	56.867	ENSLACG00000007739	FANCM	91	55.882	Latimeria_chalumnae
ENSSMAG00000019903	-	100	65.871	ENSLOCG00000011318	FANCM	99	44.553	Lepisosteus_oculatus
ENSSMAG00000019903	-	99	54.523	ENSLAFG00000001136	FANCM	81	52.954	Loxodonta_africana
ENSSMAG00000019903	-	99	55.012	ENSMFAG00000000383	FANCM	82	51.660	Macaca_fascicularis
ENSSMAG00000019903	-	99	55.012	ENSMMUG00000016513	FANCM	82	51.660	Macaca_mulatta
ENSSMAG00000019903	-	99	55.012	ENSMNEG00000038659	FANCM	82	51.349	Macaca_nemestrina
ENSSMAG00000019903	-	91	54.497	ENSMLEG00000035743	FANCM	81	49.290	Mandrillus_leucophaeus
ENSSMAG00000019903	-	100	82.892	ENSMAMG00000007087	-	99	68.972	Mastacembelus_armatus
ENSSMAG00000019903	-	100	81.446	ENSMZEG00005004644	-	99	65.724	Maylandia_zebra
ENSSMAG00000019903	-	81	52.959	ENSMAUG00000015450	Fancm	75	49.208	Mesocricetus_auratus
ENSSMAG00000019903	-	82	62.281	ENSMICG00000005811	FANCM	78	55.074	Microcebus_murinus
ENSSMAG00000019903	-	79	62.500	ENSMOCG00000008775	Fancm	80	53.991	Microtus_ochrogaster
ENSSMAG00000019903	-	75	79.355	ENSMMOG00000010215	-	99	62.698	Mola_mola
ENSSMAG00000019903	-	98	54.657	ENSMODG00000007334	FANCM	88	47.207	Monodelphis_domestica
ENSSMAG00000019903	-	100	81.928	ENSMALG00000013187	-	96	81.412	Monopterus_albus
ENSSMAG00000019903	-	99	53.790	MGP_CAROLIEiJ_G0017791	Fancm	76	51.104	Mus_caroli
ENSSMAG00000019903	-	99	52.812	ENSMUSG00000055884	Fancm	86	67.071	Mus_musculus
ENSSMAG00000019903	-	80	55.723	MGP_PahariEiJ_G0029547	Fancm	76	53.856	Mus_pahari
ENSSMAG00000019903	-	80	61.027	MGP_SPRETEiJ_G0018636	Fancm	89	49.022	Mus_spretus
ENSSMAG00000019903	-	99	55.501	ENSMPUG00000004849	FANCM	72	53.191	Mustela_putorius_furo
ENSSMAG00000019903	-	99	51.707	ENSMLUG00000006671	FANCM	90	47.265	Myotis_lucifugus
ENSSMAG00000019903	-	81	59.941	ENSNGAG00000017199	Fancm	81	54.181	Nannospalax_galili
ENSSMAG00000019903	-	64	81.887	ENSNBRG00000024095	-	100	82.222	Neolamprologus_brichardi
ENSSMAG00000019903	-	99	56.235	ENSNLEG00000004432	FANCM	90	48.783	Nomascus_leucogenys
ENSSMAG00000019903	-	77	52.516	ENSMEUG00000004977	-	59	48.949	Notamacropus_eugenii
ENSSMAG00000019903	-	100	80.964	ENSONIG00000003531	-	90	75.870	Oreochromis_niloticus
ENSSMAG00000019903	-	71	58.774	ENSOANG00000013997	FANCM	78	58.774	Ornithorhynchus_anatinus
ENSSMAG00000019903	-	99	55.961	ENSOCUG00000007539	FANCM	73	53.348	Oryctolagus_cuniculus
ENSSMAG00000019903	-	100	74.163	ENSORLG00000014503	-	99	59.925	Oryzias_latipes
ENSSMAG00000019903	-	100	74.402	ENSORLG00020013516	-	99	60.019	Oryzias_latipes_hni
ENSSMAG00000019903	-	100	73.861	ENSORLG00015012100	-	99	59.394	Oryzias_latipes_hsok
ENSSMAG00000019903	-	100	74.217	ENSOMEG00000010717	-	99	59.934	Oryzias_melastigma
ENSSMAG00000019903	-	82	63.158	ENSOGAG00000003015	FANCM	78	54.784	Otolemur_garnettii
ENSSMAG00000019903	-	99	55.257	ENSOARG00000009429	FANCM	72	55.137	Ovis_aries
ENSSMAG00000019903	-	99	56.479	ENSPPAG00000028944	FANCM	81	52.972	Pan_paniscus
ENSSMAG00000019903	-	99	55.990	ENSPPRG00000011952	-	88	65.127	Panthera_pardus
ENSSMAG00000019903	-	99	55.990	ENSPTIG00000018621	-	88	65.287	Panthera_tigris_altaica
ENSSMAG00000019903	-	99	55.990	ENSPTRG00000006307	FANCM	90	47.889	Pan_troglodytes
ENSSMAG00000019903	-	99	55.257	ENSPANG00000023200	FANCM	90	47.482	Papio_anubis
ENSSMAG00000019903	-	100	66.265	ENSPKIG00000000861	-	92	66.194	Paramormyrops_kingsleyae
ENSSMAG00000019903	-	64	83.083	ENSPMGG00000010830	-	100	83.395	Periophthalmus_magnuspinnatus
ENSSMAG00000019903	-	99	54.034	ENSPEMG00000005619	Fancm	75	58.704	Peromyscus_maniculatus_bairdii
ENSSMAG00000019903	-	65	69.776	ENSPCIG00000005354	-	85	65.620	Phascolarctos_cinereus
ENSSMAG00000019903	-	86	77.763	ENSPFOG00000002008	-	86	77.763	Poecilia_formosa
ENSSMAG00000019903	-	100	75.300	ENSPLAG00000014164	-	99	59.447	Poecilia_latipinna
ENSSMAG00000019903	-	100	74.101	ENSPMEG00000010746	-	99	58.848	Poecilia_mexicana
ENSSMAG00000019903	-	100	74.341	ENSPREG00000019849	-	99	59.401	Poecilia_reticulata
ENSSMAG00000019903	-	99	55.990	ENSPPYG00000005781	FANCM	85	47.444	Pongo_abelii
ENSSMAG00000019903	-	99	38.142	ENSPCAG00000011363	-	63	53.846	Procavia_capensis
ENSSMAG00000019903	-	69	56.725	ENSPCOG00000014388	FANCM	76	55.859	Propithecus_coquereli
ENSSMAG00000019903	-	71	51.864	ENSPVAG00000015802	FANCM	64	53.684	Pteropus_vampyrus
ENSSMAG00000019903	-	64	81.509	ENSPNYG00000018775	-	100	81.852	Pundamilia_nyererei
ENSSMAG00000019903	-	99	54.479	ENSPNAG00000013558	-	99	44.590	Pygocentrus_nattereri
ENSSMAG00000019903	-	78	60.991	ENSRNOG00000056721	Fancm	92	49.790	Rattus_norvegicus
ENSSMAG00000019903	-	99	55.501	ENSRBIG00000011451	FANCM	81	51.750	Rhinopithecus_bieti
ENSSMAG00000019903	-	99	55.257	ENSRROG00000028917	FANCM	81	51.966	Rhinopithecus_roxellana
ENSSMAG00000019903	-	54	49.107	YIR002C	-	61	32.432	Saccharomyces_cerevisiae
ENSSMAG00000019903	-	99	56.235	ENSSBOG00000030882	FANCM	93	46.459	Saimiri_boliviensis_boliviensis
ENSSMAG00000019903	-	76	63.091	ENSSHAG00000000507	FANCM	90	47.059	Sarcophilus_harrisii
ENSSMAG00000019903	-	64	76.226	ENSSFOG00015017948	-	99	76.208	Scleropages_formosus
ENSSMAG00000019903	-	99	85.507	ENSSDUG00000016682	-	91	91.453	Seriola_dumerili
ENSSMAG00000019903	-	99	85.507	ENSSLDG00000003408	-	99	75.692	Seriola_lalandi_dorsalis
ENSSMAG00000019903	-	99	54.523	ENSSARG00000002618	FANCM	53	57.635	Sorex_araneus
ENSSMAG00000019903	-	92	78.215	ENSSPAG00000016930	-	97	79.058	Stegastes_partitus
ENSSMAG00000019903	-	99	54.034	ENSSSCG00000005000	FANCM	89	48.693	Sus_scrofa
ENSSMAG00000019903	-	65	67.164	ENSTGUG00000013226	-	99	57.490	Taeniopygia_guttata
ENSSMAG00000019903	-	83	76.522	ENSTRUG00000009756	-	97	80.775	Takifugu_rubripes
ENSSMAG00000019903	-	100	68.193	ENSTNIG00000017277	-	100	55.764	Tetraodon_nigroviridis
ENSSMAG00000019903	-	99	54.768	ENSTTRG00000006669	FANCM	89	47.138	Tursiops_truncatus
ENSSMAG00000019903	-	99	55.746	ENSUMAG00000007704	-	94	61.103	Ursus_maritimus
ENSSMAG00000019903	-	99	55.746	ENSVPAG00000005763	FANCM	64	58.333	Vicugna_pacos
ENSSMAG00000019903	-	99	55.012	ENSVVUG00000000357	FANCM	83	48.349	Vulpes_vulpes
ENSSMAG00000019903	-	65	74.627	ENSXETG00000003046	fancm	90	64.237	Xenopus_tropicalis
ENSSMAG00000019903	-	66	88.703	ENSXCOG00000004854	-	85	88.703	Xiphophorus_couchianus
ENSSMAG00000019903	-	100	72.902	ENSXMAG00000007702	-	99	59.174	Xiphophorus_maculatus