EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000019926 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: RAB34%2C member RAS oncogene family b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5667 bases
Position: chr4:5813106-5818772
Accession: ZDB-GENE-091118-61
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000032527	MMR_HSR1	PF01926.23	1e-05	1	1
ENSSMAP00000032525	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000032932	-	705	-	ENSSMAP00000032527	234 (aa)	-	-
ENSSMAT00000032930	-	750	-	ENSSMAP00000032525	249 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000019926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000019926	rab34b	71	35.152	ENSSMAG00000001002	rab2a	76	35.152
ENSSMAG00000019926	rab34b	99	68.220	ENSSMAG00000004343	rab34a	89	67.932
ENSSMAG00000019926	rab34b	69	36.646	ENSSMAG00000009201	rab1ba	79	36.646
ENSSMAG00000019926	rab34b	65	31.515	ENSSMAG00000001414	-	70	31.515
ENSSMAG00000019926	rab34b	65	35.948	ENSSMAG00000009722	rab25a	71	35.948
ENSSMAG00000019926	rab34b	50	41.026	ENSSMAG00000016206	rab11al	54	41.026
ENSSMAG00000019926	rab34b	68	32.500	ENSSMAG00000007323	rab5c	71	32.500
ENSSMAG00000019926	rab34b	50	40.171	ENSSMAG00000018613	-	53	40.171
ENSSMAG00000019926	rab34b	71	36.527	ENSSMAG00000018454	-	76	36.527
ENSSMAG00000019926	rab34b	69	37.267	ENSSMAG00000004416	-	74	37.267
ENSSMAG00000019926	rab34b	50	35.537	ENSSMAG00000014078	RAB9A	60	35.537
ENSSMAG00000019926	rab34b	51	41.667	ENSSMAG00000015955	rab33ba	65	36.250
ENSSMAG00000019926	rab34b	68	36.875	ENSSMAG00000016376	-	79	36.875
ENSSMAG00000019926	rab34b	74	30.636	ENSSMAG00000020311	rab42a	78	30.636
ENSSMAG00000019926	rab34b	68	34.969	ENSSMAG00000013945	si:dkey-13a21.4	78	34.969
ENSSMAG00000019926	rab34b	69	37.267	ENSSMAG00000015774	rab41	75	37.267
ENSSMAG00000019926	rab34b	51	36.885	ENSSMAG00000011579	RAB7A	59	36.885
ENSSMAG00000019926	rab34b	88	30.516	ENSSMAG00000016183	rab25b	94	30.516
ENSSMAG00000019926	rab34b	69	37.267	ENSSMAG00000021049	-	78	37.267
ENSSMAG00000019926	rab34b	51	43.333	ENSSMAG00000002229	zgc:101559	51	43.333
ENSSMAG00000019926	rab34b	71	37.725	ENSSMAG00000003166	rab14	76	37.725
ENSSMAG00000019926	rab34b	78	30.601	ENSSMAG00000011814	rab18b	88	30.601
ENSSMAG00000019926	rab34b	68	31.250	ENSSMAG00000010140	rab22a	84	31.250
ENSSMAG00000019926	rab34b	68	33.333	ENSSMAG00000012678	rab12	78	31.250
ENSSMAG00000019926	rab34b	69	37.888	ENSSMAG00000017205	-	76	36.646
ENSSMAG00000019926	rab34b	85	33.173	ENSSMAG00000005651	-	96	33.173
ENSSMAG00000019926	rab34b	68	31.646	ENSSMAG00000002969	rab18a	77	31.677
ENSSMAG00000019926	rab34b	60	35.294	ENSSMAG00000006709	rab9b	72	35.294
ENSSMAG00000019926	rab34b	99	51.464	ENSSMAG00000020045	rab36	91	51.464
ENSSMAG00000019926	rab34b	76	34.078	ENSSMAG00000002569	-	83	34.078
ENSSMAG00000019926	rab34b	75	32.386	ENSSMAG00000006341	rab23	77	36.646
ENSSMAG00000019926	rab34b	85	32.843	ENSSMAG00000001953	rab39bb	95	32.843
ENSSMAG00000019926	rab34b	86	34.826	ENSSMAG00000000660	rab35b	96	34.826
ENSSMAG00000019926	rab34b	58	33.088	ENSSMAG00000018818	rab20	50	33.088
ENSSMAG00000019926	rab34b	68	32.500	ENSSMAG00000009229	rab5aa	74	32.500
ENSSMAG00000019926	rab34b	69	37.267	ENSSMAG00000000335	rab6bb	76	37.267
ENSSMAG00000019926	rab34b	86	30.000	ENSSMAG00000011769	si:dkey-16l2.16	89	30.049
ENSSMAG00000019926	rab34b	71	34.731	ENSSMAG00000019773	rab15	77	34.731
ENSSMAG00000019926	rab34b	68	36.250	ENSSMAG00000002500	rab30	78	36.250
ENSSMAG00000019926	rab34b	55	41.985	ENSSMAG00000012178	-	54	41.985
ENSSMAG00000019926	rab34b	73	35.673	ENSSMAG00000017528	rab1ab	82	35.673
ENSSMAG00000019926	rab34b	50	40.171	ENSSMAG00000004922	rab11bb	53	40.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019926	rab34b	93	86.239	ENSAPOG00000019147	rab34b	96	77.723	Acanthochromis_polyacanthus
ENSSMAG00000019926	rab34b	100	75.214	ENSACIG00000004859	rab34b	96	76.132	Amphilophus_citrinellus
ENSSMAG00000019926	rab34b	98	85.944	ENSAOCG00000007106	rab34b	91	85.944	Amphiprion_ocellaris
ENSSMAG00000019926	rab34b	94	87.727	ENSAPEG00000018607	rab34b	80	88.789	Amphiprion_percula
ENSSMAG00000019926	rab34b	100	83.830	ENSATEG00000006851	rab34b	92	85.590	Anabas_testudineus
ENSSMAG00000019926	rab34b	100	85.232	ENSACLG00000005733	rab34b	89	88.136	Astatotilapia_calliptera
ENSSMAG00000019926	rab34b	100	70.763	ENSAMXG00000006018	rab34b	92	72.034	Astyanax_mexicanus
ENSSMAG00000019926	rab34b	96	84.100	ENSCSEG00000018133	rab34b	95	84.100	Cynoglossus_semilaevis
ENSSMAG00000019926	rab34b	99	74.678	ENSDARG00000010977	rab34b	91	76.496	Danio_rerio
ENSSMAG00000019926	rab34b	100	79.325	ENSELUG00000005597	rab34b	94	81.070	Esox_lucius
ENSSMAG00000019926	rab34b	100	81.013	ENSFHEG00000004532	rab34b	93	84.255	Fundulus_heteroclitus
ENSSMAG00000019926	rab34b	88	79.612	ENSGMOG00000007140	rab34b	100	79.612	Gadus_morhua
ENSSMAG00000019926	rab34b	100	85.232	ENSGACG00000020514	rab34b	92	87.764	Gasterosteus_aculeatus
ENSSMAG00000019926	rab34b	99	70.513	ENSIPUG00000024531	rab34	91	72.222	Ictalurus_punctatus
ENSSMAG00000019926	rab34b	100	80.932	ENSKMAG00000019341	rab34b	97	80.972	Kryptolebias_marmoratus
ENSSMAG00000019926	rab34b	100	87.607	ENSLBEG00000027819	rab34b	98	87.045	Labrus_bergylta
ENSSMAG00000019926	rab34b	100	86.325	ENSMAMG00000020214	rab34b	98	83.333	Mastacembelus_armatus
ENSSMAG00000019926	rab34b	99	84.615	ENSMMOG00000010936	rab34b	86	84.615	Mola_mola
ENSSMAG00000019926	rab34b	96	84.583	ENSMALG00000018499	rab34b	90	84.583	Monopterus_albus
ENSSMAG00000019926	rab34b	100	85.654	ENSONIG00000005519	rab34b	93	88.511	Oreochromis_niloticus
ENSSMAG00000019926	rab34b	100	82.906	ENSORLG00000003119	rab34b	90	82.186	Oryzias_latipes
ENSSMAG00000019926	rab34b	100	82.906	ENSORLG00020016139	rab34b	90	81.781	Oryzias_latipes_hni
ENSSMAG00000019926	rab34b	100	83.333	ENSORLG00015000584	rab34b	90	82.591	Oryzias_latipes_hsok
ENSSMAG00000019926	rab34b	100	83.333	ENSOMEG00000010334	rab34b	95	83.333	Oryzias_melastigma
ENSSMAG00000019926	rab34b	100	68.776	ENSPKIG00000013326	rab34b	91	72.458	Paramormyrops_kingsleyae
ENSSMAG00000019926	rab34b	100	83.051	ENSPMGG00000021697	rab34b	92	86.017	Periophthalmus_magnuspinnatus
ENSSMAG00000019926	rab34b	100	81.013	ENSPFOG00000011444	rab34b	93	84.746	Poecilia_formosa
ENSSMAG00000019926	rab34b	100	81.013	ENSPLAG00000005074	rab34b	93	84.681	Poecilia_latipinna
ENSSMAG00000019926	rab34b	100	81.013	ENSPMEG00000013297	rab34b	93	84.681	Poecilia_mexicana
ENSSMAG00000019926	rab34b	100	81.013	ENSPREG00000009813	rab34b	93	84.255	Poecilia_reticulata
ENSSMAG00000019926	rab34b	89	88.462	ENSPNYG00000017153	rab34b	99	89.831	Pundamilia_nyererei
ENSSMAG00000019926	rab34b	100	70.042	ENSPNAG00000015040	rab34b	99	70.042	Pygocentrus_nattereri
ENSSMAG00000019926	rab34b	100	67.647	ENSSFOG00015005188	rab34	91	72.458	Scleropages_formosus
ENSSMAG00000019926	rab34b	100	88.186	ENSSDUG00000016760	rab34b	74	91.102	Seriola_dumerili
ENSSMAG00000019926	rab34b	78	91.209	ENSSLDG00000014812	rab34b	90	91.304	Seriola_lalandi_dorsalis
ENSSMAG00000019926	rab34b	100	84.322	ENSSPAG00000002801	rab34b	93	87.660	Stegastes_partitus
ENSSMAG00000019926	rab34b	98	81.148	ENSTRUG00000014481	rab34b	99	81.148	Takifugu_rubripes
ENSSMAG00000019926	rab34b	100	79.747	ENSTNIG00000016158	rab34b	92	82.700	Tetraodon_nigroviridis