EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSMAG00000019954 (Gene tree)
Gene ID
-
Gene Symbol
aff3
Alias
id:ibd5053|si:dkey-19j7.2
Full Name
AF4/FMR2 family%2C member 3
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
17414 bases
Position
chr14:15542339-15559752
Accession
ZDB-GENE-030219-193
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000032562AF-4PF05110.138.6e-13912
ENSSMAP00000032562AF-4PF05110.138.6e-13922
ENSSMAP00000032576AF-4PF05110.135.7e-13211
ENSSMAP00000032651AF-4PF05110.132.9e-12811
ENSSMAP00000032594AF-4PF05110.134.4e-12811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000033057-7745-ENSSMAP000000326511152 (aa)--
ENSSMAT00000032982-7699-ENSSMAP000000325761147 (aa)--
ENSSMAT00000032967-7657-ENSSMAP000000325621230 (aa)--
ENSSMAT00000033000-7489-ENSSMAP000000325941077 (aa)--
Gene Model
Click here to download ENSSMAG00000019954's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019954's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000019954aff39972.174ENSAPOG00000006031aff310072.609Acanthochromis_polyacanthus
ENSSMAG00000019954aff310071.661ENSAPEG00000006641aff310072.432Amphiprion_percula
ENSSMAG00000019954aff310075.721ENSATEG00000008905aff310076.603Anabas_testudineus
ENSSMAG00000019954aff39861.121ENSCVAG00000019194aff39961.364Cyprinodon_variegatus
ENSSMAG00000019954aff38458.569ENSGAFG00000021231aff39859.045Gambusia_affinis
ENSSMAG00000019954aff39965.421ENSKMAG00000001570aff39965.575Kryptolebias_marmoratus
ENSSMAG00000019954aff39874.060ENSMAMG00000016840aff39974.147Mastacembelus_armatus
ENSSMAG00000019954aff310060.368ENSORLG00000022089aff310060.161Oryzias_latipes
ENSSMAG00000019954aff310060.240ENSORLG00020011289aff310060.112Oryzias_latipes_hni
ENSSMAG00000019954aff39759.639ENSORLG00015014530aff39958.713Oryzias_latipes_hsok
ENSSMAG00000019954aff310060.448ENSOMEG00000011755aff310060.128Oryzias_melastigma
ENSSMAG00000019954aff36449.164ENSPKIG00000011220aff38345.703Paramormyrops_kingsleyae
ENSSMAG00000019954aff310063.932ENSPFOG00000015830aff39964.304Poecilia_formosa
ENSSMAG00000019954aff310075.000ENSPREG00000008458aff310065.124Poecilia_reticulata
ENSSMAG00000019954aff39779.849ENSSLDG00000005399aff310080.247Seriola_lalandi_dorsalis
ENSSMAG00000019954aff310074.271ENSSPAG00000020071aff310074.334Stegastes_partitus
ENSSMAG00000019954aff310064.753ENSXMAG00000030063aff310065.100Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us