EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000019966 (Gene tree)
Gene ID: -
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1 ribosome biogenesis factor
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 14119 bases
Position: chr18:3998940-4013058
Accession: ZDB-GENE-060720-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000032579	AARP2CN	PF08142.12	7.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000032985	-	4395	-	ENSSMAP00000032579	1233 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000019966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000019966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000019966	bms1	53	65.961	ENSG00000165733	BMS1	82	73.733	Homo_sapiens
ENSSMAG00000019966	bms1	88	82.094	ENSAPOG00000002296	bms1	100	81.359	Acanthochromis_polyacanthus
ENSSMAG00000019966	bms1	90	91.948	ENSACIG00000002588	bms1	50	82.907	Amphilophus_citrinellus
ENSSMAG00000019966	bms1	100	82.661	ENSAOCG00000018088	bms1	100	82.419	Amphiprion_ocellaris
ENSSMAG00000019966	bms1	100	82.567	ENSAPEG00000014673	bms1	100	82.486	Amphiprion_percula
ENSSMAG00000019966	bms1	100	83.414	ENSATEG00000023465	bms1	100	82.759	Anabas_testudineus
ENSSMAG00000019966	bms1	97	64.444	ENSACAG00000004537	-	81	72.082	Anolis_carolinensis
ENSSMAG00000019966	bms1	51	66.561	ENSANAG00000023432	BMS1	81	73.272	Aotus_nancymaae
ENSSMAG00000019966	bms1	100	78.952	ENSACLG00000001294	bms1	100	78.629	Astatotilapia_calliptera
ENSSMAG00000019966	bms1	51	75.911	ENSAMXG00000011236	bms1	100	69.020	Astyanax_mexicanus
ENSSMAG00000019966	bms1	99	61.035	ENSBTAG00000012878	BMS1	89	67.955	Bos_taurus
ENSSMAG00000019966	bms1	83	53.563	WBGene00022021	Y61A9LA.10	94	53.563	Caenorhabditis_elegans
ENSSMAG00000019966	bms1	53	65.601	ENSCJAG00000021705	BMS1	89	67.633	Callithrix_jacchus
ENSSMAG00000019966	bms1	99	60.777	ENSCHIG00000023251	BMS1	81	74.253	Capra_hircus
ENSSMAG00000019966	bms1	99	57.665	ENSCAPG00000008652	BMS1	89	62.007	Cavia_aperea
ENSSMAG00000019966	bms1	99	60.700	ENSCPOG00000000502	BMS1	89	65.916	Cavia_porcellus
ENSSMAG00000019966	bms1	53	65.957	ENSCATG00000030625	-	89	67.203	Cercocebus_atys
ENSSMAG00000019966	bms1	82	53.659	ENSCATG00000008695	-	70	56.793	Cercocebus_atys
ENSSMAG00000019966	bms1	99	60.259	ENSCLAG00000002446	BMS1	82	73.733	Chinchilla_lanigera
ENSSMAG00000019966	bms1	53	65.805	ENSCSAG00000011118	BMS1	89	67.203	Chlorocebus_sabaeus
ENSSMAG00000019966	bms1	57	58.089	ENSCHOG00000011055	BMS1	81	72.874	Choloepus_hoffmanni
ENSSMAG00000019966	bms1	98	61.778	ENSCPBG00000025581	BMS1	80	75.057	Chrysemys_picta_bellii
ENSSMAG00000019966	bms1	81	62.469	ENSCING00000003181	-	95	62.469	Ciona_intestinalis
ENSSMAG00000019966	bms1	72	53.176	ENSCSAVG00000004113	-	89	52.874	Ciona_savignyi
ENSSMAG00000019966	bms1	99	61.057	ENSCANG00000011609	BMS1	89	67.363	Colobus_angolensis_palliatus
ENSSMAG00000019966	bms1	98	61.455	ENSCGRG00001019461	Bms1	90	66.506	Cricetulus_griseus_chok1gshd
ENSSMAG00000019966	bms1	98	61.455	ENSCGRG00000009016	Bms1	90	66.506	Cricetulus_griseus_crigri
ENSSMAG00000019966	bms1	100	77.928	ENSCSEG00000002469	bms1	100	76.232	Cynoglossus_semilaevis
ENSSMAG00000019966	bms1	100	78.055	ENSCVAG00000008371	bms1	100	78.082	Cyprinodon_variegatus
ENSSMAG00000019966	bms1	59	69.829	ENSDARG00000054154	bms1	99	69.792	Danio_rerio
ENSSMAG00000019966	bms1	99	60.774	ENSDNOG00000015761	BMS1	89	67.633	Dasypus_novemcinctus
ENSSMAG00000019966	bms1	99	61.026	ENSDORG00000002982	Bms1	82	72.874	Dipodomys_ordii
ENSSMAG00000019966	bms1	87	60.533	FBgn0036686	CG7728	92	59.294	Drosophila_melanogaster
ENSSMAG00000019966	bms1	99	60.963	ENSEASG00005006894	BMS1	89	67.472	Equus_asinus_asinus
ENSSMAG00000019966	bms1	99	61.345	ENSECAG00000001358	BMS1	89	67.472	Equus_caballus
ENSSMAG00000019966	bms1	100	71.895	ENSELUG00000001756	bms1	100	71.815	Esox_lucius
ENSSMAG00000019966	bms1	59	57.830	ENSFCAG00000011220	BMS1	89	66.881	Felis_catus
ENSSMAG00000019966	bms1	99	65.505	ENSFALG00000006882	BMS1	80	73.684	Ficedula_albicollis
ENSSMAG00000019966	bms1	99	60.673	ENSFDAG00000001422	BMS1	89	67.042	Fukomys_damarensis
ENSSMAG00000019966	bms1	100	78.514	ENSFHEG00000003367	bms1	100	77.141	Fundulus_heteroclitus
ENSSMAG00000019966	bms1	93	73.793	ENSGALG00000002624	BMS1	89	68.109	Gallus_gallus
ENSSMAG00000019966	bms1	99	83.254	ENSGACG00000015334	bms1	89	82.137	Gasterosteus_aculeatus
ENSSMAG00000019966	bms1	96	69.614	ENSGAGG00000003467	BMS1	83	74.600	Gopherus_agassizii
ENSSMAG00000019966	bms1	100	78.871	ENSHBUG00000022628	bms1	100	78.548	Haplochromis_burtoni
ENSSMAG00000019966	bms1	99	78.057	ENSHCOG00000017604	bms1	100	76.849	Hippocampus_comes
ENSSMAG00000019966	bms1	99	72.310	ENSIPUG00000017855	bms1	99	71.858	Ictalurus_punctatus
ENSSMAG00000019966	bms1	66	73.016	ENSKMAG00000021982	bms1	97	72.161	Kryptolebias_marmoratus
ENSSMAG00000019966	bms1	100	78.457	ENSLBEG00000028208	bms1	100	78.698	Labrus_bergylta
ENSSMAG00000019966	bms1	59	52.088	ENSLACG00000001600	BMS1	81	74.453	Latimeria_chalumnae
ENSSMAG00000019966	bms1	53	75.378	ENSLOCG00000012914	bms1	99	70.896	Lepisosteus_oculatus
ENSSMAG00000019966	bms1	53	64.804	ENSLAFG00000006250	BMS1	81	72.874	Loxodonta_africana
ENSSMAG00000019966	bms1	86	65.370	ENSMFAG00000037771	BMS1	98	64.486	Macaca_fascicularis
ENSSMAG00000019966	bms1	66	58.411	ENSMLEG00000029084	-	79	56.072	Mandrillus_leucophaeus
ENSSMAG00000019966	bms1	100	80.983	ENSMAMG00000020855	bms1	100	80.177	Mastacembelus_armatus
ENSSMAG00000019966	bms1	100	79.032	ENSMZEG00005005663	bms1	100	78.710	Maylandia_zebra
ENSSMAG00000019966	bms1	90	68.269	ENSMGAG00000001170	BMS1	81	74.474	Meleagris_gallopavo
ENSSMAG00000019966	bms1	98	61.223	ENSMAUG00000002195	Bms1	90	66.186	Mesocricetus_auratus
ENSSMAG00000019966	bms1	53	65.455	ENSMICG00000009977	BMS1	90	66.934	Microcebus_murinus
ENSSMAG00000019966	bms1	100	79.822	ENSMMOG00000000977	bms1	100	79.011	Mola_mola
ENSSMAG00000019966	bms1	99	61.789	ENSMODG00000001177	BMS1	81	72.998	Monodelphis_domestica
ENSSMAG00000019966	bms1	100	82.675	ENSMALG00000009680	bms1	100	81.467	Monopterus_albus
ENSSMAG00000019966	bms1	69	77.447	MGP_CAROLIEiJ_G0028785	-	62	77.778	Mus_caroli
ENSSMAG00000019966	bms1	98	60.538	ENSMUSG00000030138	Bms1	90	66.399	Mus_musculus
ENSSMAG00000019966	bms1	98	59.846	MGP_PahariEiJ_G0022539	Bms1	90	65.815	Mus_pahari
ENSSMAG00000019966	bms1	98	60.277	MGP_SPRETEiJ_G0029816	Bms1	90	65.916	Mus_spretus
ENSSMAG00000019966	bms1	99	61.702	ENSMPUG00000017276	BMS1	89	67.633	Mustela_putorius_furo
ENSSMAG00000019966	bms1	99	60.444	ENSMLUG00000003260	BMS1	89	67.419	Myotis_lucifugus
ENSSMAG00000019966	bms1	99	56.295	ENSNGAG00000015258	Bms1	85	67.685	Nannospalax_galili
ENSSMAG00000019966	bms1	53	63.843	ENSNLEG00000015791	BMS1	89	65.113	Nomascus_leucogenys
ENSSMAG00000019966	bms1	83	76.658	ENSOPRG00000005195	BMS1	80	75.980	Ochotona_princeps
ENSSMAG00000019966	bms1	99	60.963	ENSODEG00000005554	BMS1	89	65.756	Octodon_degus
ENSSMAG00000019966	bms1	100	79.694	ENSONIG00000007227	bms1	100	79.113	Oreochromis_niloticus
ENSSMAG00000019966	bms1	99	60.625	ENSOANG00000000662	-	82	72.273	Ornithorhynchus_anatinus
ENSSMAG00000019966	bms1	99	61.035	ENSOCUG00000005354	BMS1	82	74.365	Oryctolagus_cuniculus
ENSSMAG00000019966	bms1	99	79.028	ENSORLG00000014655	bms1	99	78.462	Oryzias_latipes
ENSSMAG00000019966	bms1	99	76.635	ENSORLG00020016246	bms1	82	78.889	Oryzias_latipes_hni
ENSSMAG00000019966	bms1	99	76.905	ENSORLG00015014183	bms1	99	77.386	Oryzias_latipes_hsok
ENSSMAG00000019966	bms1	99	78.866	ENSOMEG00000015042	bms1	99	78.057	Oryzias_melastigma
ENSSMAG00000019966	bms1	99	61.081	ENSOGAG00000006511	BMS1	89	66.827	Otolemur_garnettii
ENSSMAG00000019966	bms1	99	60.668	ENSOARG00000003900	BMS1	81	73.576	Ovis_aries
ENSSMAG00000019966	bms1	53	60.725	ENSPPAG00000027837	BMS1	81	73.793	Pan_paniscus
ENSSMAG00000019966	bms1	99	61.018	ENSPPRG00000001311	BMS1	89	66.881	Panthera_pardus
ENSSMAG00000019966	bms1	99	59.939	ENSPTIG00000009652	BMS1	88	65.125	Panthera_tigris_altaica
ENSSMAG00000019966	bms1	86	79.727	ENSPKIG00000008165	bms1	88	77.244	Paramormyrops_kingsleyae
ENSSMAG00000019966	bms1	89	72.034	ENSPSIG00000006481	BMS1	81	75.172	Pelodiscus_sinensis
ENSSMAG00000019966	bms1	67	65.899	ENSPCIG00000001339	BMS1	81	72.082	Phascolarctos_cinereus
ENSSMAG00000019966	bms1	96	81.250	ENSPFOG00000015180	bms1	68	74.830	Poecilia_formosa
ENSSMAG00000019966	bms1	99	76.229	ENSPMEG00000023176	bms1	57	74.966	Poecilia_mexicana
ENSSMAG00000019966	bms1	99	75.787	ENSPREG00000002695	bms1	60	75.102	Poecilia_reticulata
ENSSMAG00000019966	bms1	55	65.234	ENSPPYG00000002836	-	82	63.375	Pongo_abelii
ENSSMAG00000019966	bms1	77	72.789	ENSPCAG00000014528	BMS1	76	63.553	Procavia_capensis
ENSSMAG00000019966	bms1	55	61.549	ENSPVAG00000000725	BMS1	89	66.774	Pteropus_vampyrus
ENSSMAG00000019966	bms1	100	77.520	ENSPNYG00000018866	bms1	100	77.280	Pundamilia_nyererei
ENSSMAG00000019966	bms1	81	59.314	ENSRNOG00000006576	Bms1	87	68.638	Rattus_norvegicus
ENSSMAG00000019966	bms1	69	52.577	YPL217C	-	82	46.827	Saccharomyces_cerevisiae
ENSSMAG00000019966	bms1	51	67.788	ENSSBOG00000035778	BMS1	81	72.831	Saimiri_boliviensis_boliviensis
ENSSMAG00000019966	bms1	99	64.685	ENSSHAG00000005062	BMS1	80	72.769	Sarcophilus_harrisii
ENSSMAG00000019966	bms1	100	85.611	ENSSDUG00000016875	bms1	100	84.282	Seriola_dumerili
ENSSMAG00000019966	bms1	100	85.393	ENSSLDG00000015199	bms1	100	85.000	Seriola_lalandi_dorsalis
ENSSMAG00000019966	bms1	86	74.715	ENSSPUG00000014454	BMS1	81	74.715	Sphenodon_punctatus
ENSSMAG00000019966	bms1	53	66.465	ENSSSCG00000010198	BMS1	89	68.006	Sus_scrofa
ENSSMAG00000019966	bms1	94	69.293	ENSTGUG00000006302	-	80	73.913	Taeniopygia_guttata
ENSSMAG00000019966	bms1	99	70.227	ENSTRUG00000008028	bms1	99	69.399	Takifugu_rubripes
ENSSMAG00000019966	bms1	99	74.720	ENSTNIG00000006216	bms1	83	82.609	Tetraodon_nigroviridis
ENSSMAG00000019966	bms1	63	70.100	ENSTBEG00000001673	-	62	70.748	Tupaia_belangeri
ENSSMAG00000019966	bms1	99	60.258	ENSTTRG00000007983	BMS1	80	77.017	Tursiops_truncatus
ENSSMAG00000019966	bms1	55	57.521	ENSVPAG00000007477	BMS1	82	72.549	Vicugna_pacos
ENSSMAG00000019966	bms1	99	75.040	ENSXCOG00000000506	bms1	97	88.756	Xiphophorus_couchianus
ENSSMAG00000019966	bms1	99	76.371	ENSXMAG00000014236	bms1	60	74.966	Xiphophorus_maculatus