EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000020065 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
189012 bases
Position
chr22:3314431-3503442
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000032781RRM_1PF00076.229e-3212
ENSSMAP00000032781RRM_1PF00076.229e-3222
ENSSMAP00000032754RRM_1PF00076.221.8e-3112
ENSSMAP00000032754RRM_1PF00076.221.8e-3122
ENSSMAP00000032763RRM_1PF00076.222.4e-3112
ENSSMAP00000032763RRM_1PF00076.222.4e-3122
ENSSMAP00000032776RRM_1PF00076.222.9e-3112
ENSSMAP00000032776RRM_1PF00076.222.9e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000033184-1185-ENSSMAP00000032776394 (aa)--
ENSSMAT00000033191-1293-ENSSMAP00000032781268 (aa)--
ENSSMAT00000033160-1755-ENSSMAP00000032754369 (aa)--
ENSSMAT00000033169-1682-ENSSMAP00000032763403 (aa)--
Gene Model
Click here to download ENSSMAG00000020065's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020065's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000020065-5139.474ENSSMAG00000008925-7839.474
ENSSMAG00000020065-5634.356ENSSMAG00000014763elavl1a6131.963
ENSSMAG00000020065-5835.789ENSSMAG00000010516pabpc1l6735.789
ENSSMAG00000020065-9381.606ENSSMAG00000004997rbms38886.196
ENSSMAG00000020065-6036.875ENSSMAG00000014353-7135.676
ENSSMAG00000020065-8875.077ENSSMAG00000003683rbms2a9969.624
ENSSMAG00000020065-6632.632ENSSMAG00000006869pabpc1b5932.632
ENSSMAG00000020065-5633.750ENSSMAG00000015634celf3b5433.750
ENSSMAG00000020065-6337.989ENSSMAG00000010745ELAVL26537.879
ENSSMAG00000020065-5338.961ENSSMAG00000013827celf15339.474
ENSSMAG00000020065-5633.750ENSSMAG00000002478celf3a5733.750
ENSSMAG00000020065-5437.908ENSSMAG00000006881elavl46136.723
ENSSMAG00000020065-5832.632ENSSMAG00000010803pabpc1a6032.632
ENSSMAG00000020065-5636.250ENSSMAG00000009331celf45636.250
ENSSMAG00000020065-9671.353ENSSMAG00000004221rbms2b9371.618
ENSSMAG00000020065-6635.000ENSSMAG00000004671elavl36535.802
ENSSMAG00000020065-6536.250ENSSMAG00000011707celf5a5436.250
ENSSMAG00000020065-5140.789ENSSMAG00000008985-5240.789
ENSSMAG00000020065-5833.010ENSSMAG00000009007pabpc45933.684
ENSSMAG00000020065-9268.497ENSSMAG00000012152RBMS19369.405
ENSSMAG00000020065-9159.531ENSSMAG00000012722rbms1a9858.708
ENSSMAG00000020065-5635.000ENSSMAG00000008575-5135.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000020065-9884.709ENSG00000144642RBMS310090.152Homo_sapiens
ENSSMAG00000020065-9793.781ENSAPOG00000003432-9892.857Acanthochromis_polyacanthus
ENSSMAG00000020065-9980.387ENSAPOG00000007266rbms39980.630Acanthochromis_polyacanthus
ENSSMAG00000020065-7378.644ENSAMEG00000005947RBMS39678.644Ailuropoda_melanoleuca
ENSSMAG00000020065-8875.767ENSACIG00000021113RBMS39376.033Amphilophus_citrinellus
ENSSMAG00000020065-8498.387ENSACIG00000006987-8996.319Amphilophus_citrinellus
ENSSMAG00000020065-9384.456ENSAOCG00000021274rbms39084.456Amphiprion_ocellaris
ENSSMAG00000020065-9593.352ENSAOCG00000024104-9885.647Amphiprion_ocellaris
ENSSMAG00000020065-9880.267ENSAPEG00000016299rbms39880.267Amphiprion_percula
ENSSMAG00000020065-9785.360ENSAPEG00000009481-9784.483Amphiprion_percula
ENSSMAG00000020065-9385.156ENSATEG00000024295rbms39085.417Anabas_testudineus
ENSSMAG00000020065-9793.781ENSATEG00000008433-9892.857Anabas_testudineus
ENSSMAG00000020065-9387.755ENSAPLG00000012270RBMS39085.969Anas_platyrhynchos
ENSSMAG00000020065-9390.765ENSACAG00000028664RBMS39090.765Anolis_carolinensis
ENSSMAG00000020065-9882.118ENSANAG00000021899RBMS39782.118Aotus_nancymaae
ENSSMAG00000020065-9792.935ENSACLG00000008976-9185.176Astatotilapia_calliptera
ENSSMAG00000020065-9384.334ENSACLG00000018506rbms39084.595Astatotilapia_calliptera
ENSSMAG00000020065-9392.781ENSAMXG00000020388rbms39092.781Astyanax_mexicanus
ENSSMAG00000020065-7592.079ENSAMXG00000043770-10087.597Astyanax_mexicanus
ENSSMAG00000020065-9885.437ENSBTAG00000044062RBMS39785.437Bos_taurus
ENSSMAG00000020065-9882.118ENSCJAG00000004312RBMS39782.118Callithrix_jacchus
ENSSMAG00000020065-9881.542ENSCAFG00000005464RBMS39781.542Canis_familiaris
ENSSMAG00000020065-9881.542ENSCAFG00020024980RBMS39781.542Canis_lupus_dingo
ENSSMAG00000020065-9885.194ENSCHIG00000009144RBMS39785.194Capra_hircus
ENSSMAG00000020065-8180.745ENSTSYG00000002615RBMS39780.745Carlito_syrichta
ENSSMAG00000020065-9479.272ENSCAPG00000017783RBMS39578.763Cavia_aperea
ENSSMAG00000020065-9885.012ENSCPOG00000006457RBMS39785.012Cavia_porcellus
ENSSMAG00000020065-9882.118ENSCCAG00000008671RBMS39782.118Cebus_capucinus
ENSSMAG00000020065-9881.882ENSCATG00000013222RBMS39781.882Cercocebus_atys
ENSSMAG00000020065-9884.223ENSCLAG00000005866RBMS39784.223Chinchilla_lanigera
ENSSMAG00000020065-6882.061ENSCSAG00000009655RBMS39682.061Chlorocebus_sabaeus
ENSSMAG00000020065-8588.000ENSCHOG00000000758RBMS38488.000Choloepus_hoffmanni
ENSSMAG00000020065-9390.765ENSCPBG00000022678RBMS39990.263Chrysemys_picta_bellii
ENSSMAG00000020065-9881.882ENSCANG00000032137RBMS39781.882Colobus_angolensis_palliatus
ENSSMAG00000020065-9388.267ENSCGRG00001007243Rbms39684.655Cricetulus_griseus_chok1gshd
ENSSMAG00000020065-9388.267ENSCGRG00000004599Rbms39684.655Cricetulus_griseus_crigri
ENSSMAG00000020065-9398.396ENSCSEG00000014677-9499.588Cynoglossus_semilaevis
ENSSMAG00000020065-9384.935ENSCSEG00000010011RBMS39085.195Cynoglossus_semilaevis
ENSSMAG00000020065-9385.526ENSCVAG00000022354rbms39085.526Cyprinodon_variegatus
ENSSMAG00000020065-9792.954ENSCVAG00000022814-9298.397Cyprinodon_variegatus
ENSSMAG00000020065-9393.048ENSDARG00000044574rbms310095.139Danio_rerio
ENSSMAG00000020065-9884.223ENSDNOG00000016645RBMS39484.223Dasypus_novemcinctus
ENSSMAG00000020065-9883.981ENSDORG00000007220Rbms39783.981Dipodomys_ordii
ENSSMAG00000020065-7283.333ENSETEG00000009485-6180.150Echinops_telfairi
ENSSMAG00000020065-5873.718ENSEBUG00000005830rbms38954.545Eptatretus_burgeri
ENSSMAG00000020065-9884.709ENSEASG00005006152RBMS39784.709Equus_asinus_asinus
ENSSMAG00000020065-9884.709ENSECAG00000017871RBMS39784.709Equus_caballus
ENSSMAG00000020065-9379.293ENSEEUG00000014337RBMS310079.293Erinaceus_europaeus
ENSSMAG00000020065-9695.065ENSELUG00000006905-9897.531Esox_lucius
ENSSMAG00000020065-9285.146ENSELUG00000002862rbms39085.146Esox_lucius
ENSSMAG00000020065-9884.223ENSFCAG00000002130RBMS39784.223Felis_catus
ENSSMAG00000020065-9391.029ENSFALG00000009165RBMS39091.029Ficedula_albicollis
ENSSMAG00000020065-9883.981ENSFDAG00000008278RBMS39783.981Fukomys_damarensis
ENSSMAG00000020065-8877.370ENSFHEG00000004787RBMS38478.730Fundulus_heteroclitus
ENSSMAG00000020065-9089.607ENSGMOG00000002600-9484.910Gadus_morhua
ENSSMAG00000020065-9391.029ENSGALG00000011439RBMS39091.029Gallus_gallus
ENSSMAG00000020065-9498.271ENSGAFG00000003329-9793.300Gambusia_affinis
ENSSMAG00000020065-9385.302ENSGAFG00000000168rbms39085.302Gambusia_affinis
ENSSMAG00000020065-6290.909ENSGAGG00000004039RBMS38490.909Gopherus_agassizii
ENSSMAG00000020065-9882.118ENSGGOG00000007228RBMS39782.118Gorilla_gorilla
ENSSMAG00000020065-9792.935ENSHBUG00000019785-9389.260Haplochromis_burtoni
ENSSMAG00000020065-7787.793ENSHBUG00000021196rbms39486.245Haplochromis_burtoni
ENSSMAG00000020065-9884.709ENSHGLG00000002170RBMS39784.709Heterocephalus_glaber_female
ENSSMAG00000020065-9884.709ENSHGLG00100014278RBMS39784.709Heterocephalus_glaber_male
ENSSMAG00000020065-9792.060ENSHCOG00000007894-9792.060Hippocampus_comes
ENSSMAG00000020065-9392.781ENSIPUG00000017680rbms39092.781Ictalurus_punctatus
ENSSMAG00000020065-9884.709ENSSTOG00000006324RBMS39784.709Ictidomys_tridecemlineatus
ENSSMAG00000020065-9881.068ENSJJAG00000014708Rbms39781.311Jaculus_jaculus
ENSSMAG00000020065-9383.721ENSKMAG00000020500rbms39083.721Kryptolebias_marmoratus
ENSSMAG00000020065-9793.532ENSKMAG00000012586-9892.611Kryptolebias_marmoratus
ENSSMAG00000020065-6875.379ENSLBEG00000006677rbms39875.379Labrus_bergylta
ENSSMAG00000020065-9398.396ENSLBEG00000027388-9892.118Labrus_bergylta
ENSSMAG00000020065-9392.857ENSLACG00000010581RBMS39092.857Latimeria_chalumnae
ENSSMAG00000020065-7385.409ENSLOCG00000002328rbms39685.409Lepisosteus_oculatus
ENSSMAG00000020065-9881.308ENSLAFG00000000354RBMS39781.308Loxodonta_africana
ENSSMAG00000020065-9884.466ENSMFAG00000033300RBMS39784.466Macaca_fascicularis
ENSSMAG00000020065-9884.466ENSMMUG00000004404RBMS39784.466Macaca_mulatta
ENSSMAG00000020065-9881.882ENSMNEG00000035839RBMS39781.882Macaca_nemestrina
ENSSMAG00000020065-9881.882ENSMLEG00000029464RBMS39781.882Mandrillus_leucophaeus
ENSSMAG00000020065-9995.729ENSMAMG00000002176-8995.729Mastacembelus_armatus
ENSSMAG00000020065-9385.455ENSMAMG00000024043rbms39086.494Mastacembelus_armatus
ENSSMAG00000020065-9792.935ENSMZEG00005026469-9390.799Maylandia_zebra
ENSSMAG00000020065-9384.334ENSMZEG00005006308rbms39084.595Maylandia_zebra
ENSSMAG00000020065-9388.267ENSMAUG00000016436Rbms39684.655Mesocricetus_auratus
ENSSMAG00000020065-9881.882ENSMICG00000049249RBMS39781.882Microcebus_murinus
ENSSMAG00000020065-9388.000ENSMOCG00000006997Rbms39684.399Microtus_ochrogaster
ENSSMAG00000020065-9792.040ENSMMOG00000015071-9891.133Mola_mola
ENSSMAG00000020065-9284.330ENSMMOG00000008471RBMS39584.615Mola_mola
ENSSMAG00000020065-8886.571ENSMODG00000015125RBMS39776.591Monodelphis_domestica
ENSSMAG00000020065-9795.798ENSMALG00000009155-9099.465Monopterus_albus
ENSSMAG00000020065-9384.935ENSMALG00000019536RBMS39085.195Monopterus_albus
ENSSMAG00000020065-9387.200MGP_CAROLIEiJ_G0032783Rbms310090.821Mus_caroli
ENSSMAG00000020065-9388.000ENSMUSG00000039607Rbms310092.271Mus_musculus
ENSSMAG00000020065-9388.000MGP_PahariEiJ_G0015650Rbms310092.271Mus_pahari
ENSSMAG00000020065-9388.000MGP_SPRETEiJ_G0033930Rbms310092.271Mus_spretus
ENSSMAG00000020065-9881.776ENSMPUG00000011956RBMS39781.776Mustela_putorius_furo
ENSSMAG00000020065-9884.709ENSMLUG00000000659RBMS39784.709Myotis_lucifugus
ENSSMAG00000020065-9884.521ENSNGAG00000014039Rbms39784.521Nannospalax_galili
ENSSMAG00000020065-9793.035ENSNBRG00000018065-9793.035Neolamprologus_brichardi
ENSSMAG00000020065-9882.118ENSNLEG00000004129RBMS39782.118Nomascus_leucogenys
ENSSMAG00000020065-9379.597ENSMEUG00000004772RBMS39875.058Notamacropus_eugenii
ENSSMAG00000020065-9881.412ENSOPRG00000006808RBMS38381.412Ochotona_princeps
ENSSMAG00000020065-9884.223ENSODEG00000003651RBMS39784.223Octodon_degus
ENSSMAG00000020065-8886.810ENSONIG00000007172rbms38484.150Oreochromis_niloticus
ENSSMAG00000020065-9882.009ENSOANG00000010529RBMS39782.009Ornithorhynchus_anatinus
ENSSMAG00000020065-9880.841ENSOCUG00000004840RBMS39780.841Oryctolagus_cuniculus
ENSSMAG00000020065-9383.947ENSORLG00000005370RBMS39083.947Oryzias_latipes
ENSSMAG00000020065-9298.529ENSORLG00000002306-9793.035Oryzias_latipes
ENSSMAG00000020065-9383.727ENSORLG00020022674RBMS38788.263Oryzias_latipes_hni
ENSSMAG00000020065-9298.529ENSORLG00020008496-9793.035Oryzias_latipes_hni
ENSSMAG00000020065-9383.990ENSORLG00015005509rbms38788.263Oryzias_latipes_hsok
ENSSMAG00000020065-9298.529ENSORLG00015015719-9793.035Oryzias_latipes_hsok
ENSSMAG00000020065-9384.514ENSOMEG00000014805RBMS39084.514Oryzias_melastigma
ENSSMAG00000020065-9298.235ENSOMEG00000007677-9692.391Oryzias_melastigma
ENSSMAG00000020065-9881.542ENSOARG00000014684RBMS39781.542Ovis_aries
ENSSMAG00000020065-9882.118ENSPPAG00000036519RBMS39782.118Pan_paniscus
ENSSMAG00000020065-9881.412ENSPPRG00000002761RBMS39781.412Panthera_pardus
ENSSMAG00000020065-9883.981ENSPTIG00000011568RBMS39783.981Panthera_tigris_altaica
ENSSMAG00000020065-9884.709ENSPTRG00000014709RBMS39784.709Pan_troglodytes
ENSSMAG00000020065-9881.882ENSPANG00000010234RBMS39781.882Papio_anubis
ENSSMAG00000020065-7895.192ENSPKIG00000007989-10093.023Paramormyrops_kingsleyae
ENSSMAG00000020065-7894.231ENSPKIG00000016025-7394.231Paramormyrops_kingsleyae
ENSSMAG00000020065-9390.237ENSPSIG00000005269RBMS39090.237Pelodiscus_sinensis
ENSSMAG00000020065-9299.412ENSPMGG00000021683-9099.412Periophthalmus_magnuspinnatus
ENSSMAG00000020065-9384.000ENSPMGG00000021544rbms39184.000Periophthalmus_magnuspinnatus
ENSSMAG00000020065-9385.294ENSPEMG00000001117Rbms39780.049Peromyscus_maniculatus_bairdii
ENSSMAG00000020065-8589.744ENSPCIG00000006106RBMS38990.654Phascolarctos_cinereus
ENSSMAG00000020065-9385.564ENSPFOG00000017887rbms39085.564Poecilia_formosa
ENSSMAG00000020065-7584.532ENSPLAG00000016866-7284.532Poecilia_latipinna
ENSSMAG00000020065-9793.300ENSPMEG00000002993-9793.300Poecilia_mexicana
ENSSMAG00000020065-9593.094ENSPREG00000018221-9896.094Poecilia_reticulata
ENSSMAG00000020065-9383.684ENSPREG00000011880rbms38986.120Poecilia_reticulata
ENSSMAG00000020065-9868.224ENSPPYG00000014050RBMS38068.224Pongo_abelii
ENSSMAG00000020065-8675.806ENSPCAG00000006307RBMS39761.449Procavia_capensis
ENSSMAG00000020065-9882.118ENSPCOG00000017136RBMS39881.542Propithecus_coquereli
ENSSMAG00000020065-8788.000ENSPVAG00000014037RBMS39772.664Pteropus_vampyrus
ENSSMAG00000020065-9384.073ENSPNYG00000010546rbms39084.334Pundamilia_nyererei
ENSSMAG00000020065-9793.284ENSPNYG00000012624-9793.284Pundamilia_nyererei
ENSSMAG00000020065-9392.781ENSPNAG00000001800rbms39092.781Pygocentrus_nattereri
ENSSMAG00000020065-6991.304ENSPNAG00000026763-7791.379Pygocentrus_nattereri
ENSSMAG00000020065-9388.267ENSRNOG00000025881Rbms39784.655Rattus_norvegicus
ENSSMAG00000020065-9881.647ENSRBIG00000035863RBMS39781.647Rhinopithecus_bieti
ENSSMAG00000020065-9482.480ENSRROG00000027512RBMS39581.074Rhinopithecus_roxellana
ENSSMAG00000020065-9882.118ENSSBOG00000020232RBMS39782.118Saimiri_boliviensis_boliviensis
ENSSMAG00000020065-8192.333ENSSHAG00000002411RBMS38890.536Sarcophilus_harrisii
ENSSMAG00000020065-9394.920ENSSFOG00015008578rbms39694.667Scleropages_formosus
ENSSMAG00000020065-9384.935ENSSDUG00000013656RBMS39085.195Seriola_dumerili
ENSSMAG00000020065-9793.781ENSSDUG00000019287-9892.857Seriola_dumerili
ENSSMAG00000020065-9793.781ENSSLDG00000013224-9892.857Seriola_lalandi_dorsalis
ENSSMAG00000020065-9384.536ENSSLDG00000020276RBMS39084.794Seriola_lalandi_dorsalis
ENSSMAG00000020065-6895.361ENSSARG00000000695RBMS39873.481Sorex_araneus
ENSSMAG00000020065-6789.286ENSSPUG00000017197RBMS38487.938Sphenodon_punctatus
ENSSMAG00000020065-9593.352ENSSPAG00000003983-9884.471Stegastes_partitus
ENSSMAG00000020065-9384.456ENSSPAG00000020693rbms39783.853Stegastes_partitus
ENSSMAG00000020065-9389.474ENSSSCG00000036381RBMS39789.239Sus_scrofa
ENSSMAG00000020065-7587.372ENSTGUG00000003572RBMS38787.372Taeniopygia_guttata
ENSSMAG00000020065-9383.636ENSTRUG00000021719RBMS39083.636Takifugu_rubripes
ENSSMAG00000020065-9781.572ENSTRUG00000007482-9781.728Takifugu_rubripes
ENSSMAG00000020065-8887.719ENSTBEG00000005362RBMS39885.912Tupaia_belangeri
ENSSMAG00000020065-9881.075ENSTTRG00000006202RBMS39881.075Tursiops_truncatus
ENSSMAG00000020065-9881.542ENSUMAG00000000263RBMS39781.542Ursus_maritimus
ENSSMAG00000020065-9472.118ENSVPAG00000003842RBMS39570.886Vicugna_pacos
ENSSMAG00000020065-9482.353ENSVVUG00000004660RBMS39990.435Vulpes_vulpes
ENSSMAG00000020065-6883.895ENSXETG00000032055RBMS38683.895Xenopus_tropicalis
ENSSMAG00000020065-9776.800ENSXCOG00000019600-9676.800Xiphophorus_couchianus
ENSSMAG00000020065-9793.548ENSXMAG00000014382-9793.548Xiphophorus_maculatus
ENSSMAG00000020065-9383.246ENSXMAG00000021783rbms38985.804Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us