EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000020157 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
15113 bases
Position
chr21:7146795-7161907
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000032905RRM_1PF00076.222.2e-1711
ENSSMAP00000032897RRM_1PF00076.223.5e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000033315-1063-ENSSMAP00000032905232 (aa)-A0A2U9CWC2
ENSSMAT00000033307-5103-ENSSMAP00000032897284 (aa)--
Gene Model
Click here to download ENSSMAG00000020157's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020157's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000020157pabpn16560.127ENSSMAG00000021348PABPN1L7753.953
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000020157pabpn18682.524ENSG00000100836PABPN19482.143Homo_sapiens
ENSSMAG00000020157pabpn19972.532ENSG00000258643BCL2L2-PABPN17072.532Homo_sapiens
ENSSMAG00000020157pabpn110099.138ENSAPOG00000016425pabpn110099.138Acanthochromis_polyacanthus
ENSSMAG00000020157pabpn18184.211ENSAMEG00000007048BCL2L2-PABPN110084.211Ailuropoda_melanoleuca
ENSSMAG00000020157pabpn110096.853ENSACIG00000021744pabpn110098.864Amphilophus_citrinellus
ENSSMAG00000020157pabpn110099.138ENSAOCG00000015805pabpn110099.138Amphiprion_ocellaris
ENSSMAG00000020157pabpn110099.138ENSAPEG00000009623pabpn110099.138Amphiprion_percula
ENSSMAG00000020157pabpn110099.569ENSATEG00000020531pabpn110099.569Anabas_testudineus
ENSSMAG00000020157pabpn18185.789ENSACAG00000006185-8172.917Anolis_carolinensis
ENSSMAG00000020157pabpn18483.838ENSANAG00000024513-8476.033Aotus_nancymaae
ENSSMAG00000020157pabpn110096.516ENSACLG00000016374pabpn110096.516Astatotilapia_calliptera
ENSSMAG00000020157pabpn110096.996ENSAMXG00000000452pabpn110097.175Astyanax_mexicanus
ENSSMAG00000020157pabpn18483.838ENSBTAG00000006884PABPN18669.697Bos_taurus
ENSSMAG00000020157pabpn18476.531ENSBTAG00000050594-7679.798Bos_taurus
ENSSMAG00000020157pabpn18182.812ENSBTAG00000053753-7182.812Bos_taurus
ENSSMAG00000020157pabpn16258.904WBGene00003904pabp-28655.000Caenorhabditis_elegans
ENSSMAG00000020157pabpn17180.357ENSCJAG00000004407-8480.357Callithrix_jacchus
ENSSMAG00000020157pabpn19975.966ENSCJAG00000007960-8476.395Callithrix_jacchus
ENSSMAG00000020157pabpn18682.524ENSCAFG00000011482PABPN18671.212Canis_familiaris
ENSSMAG00000020157pabpn18682.524ENSCAFG00020006651-8670.833Canis_lupus_dingo
ENSSMAG00000020157pabpn18682.524ENSCAFG00020007298-8670.833Canis_lupus_dingo
ENSSMAG00000020157pabpn18682.524ENSCHIG00000012184PABPN18670.833Capra_hircus
ENSSMAG00000020157pabpn19972.532ENSTSYG00000033996BCL2L2-PABPN19482.143Carlito_syrichta
ENSSMAG00000020157pabpn15982.014ENSCAPG00000009461-9982.014Cavia_aperea
ENSSMAG00000020157pabpn18682.039ENSCPOG00000025574PABPN16881.818Cavia_porcellus
ENSSMAG00000020157pabpn19975.966ENSCCAG00000033954BCL2L2-PABPN18476.395Cebus_capucinus
ENSSMAG00000020157pabpn19975.966ENSCATG00000038536BCL2L2-PABPN18476.395Cercocebus_atys
ENSSMAG00000020157pabpn16582.119ENSCLAG00000012423PABPN15682.119Chinchilla_lanigera
ENSSMAG00000020157pabpn18681.068ENSCSAG00000016036PABPN18669.697Chlorocebus_sabaeus
ENSSMAG00000020157pabpn18972.857ENSCHOG00000004798BCL2L2-PABPN19270.909Choloepus_hoffmanni
ENSSMAG00000020157pabpn17184.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSSMAG00000020157pabpn19062.559ENSCING00000012468-8962.085Ciona_intestinalis
ENSSMAG00000020157pabpn17664.045ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSSMAG00000020157pabpn18571.212ENSCANG00000030980-8764.286Colobus_angolensis_palliatus
ENSSMAG00000020157pabpn19972.532ENSCANG00000009750BCL2L2-PABPN19482.143Colobus_angolensis_palliatus
ENSSMAG00000020157pabpn18682.039ENSCGRG00001019696Pabpn19481.548Cricetulus_griseus_chok1gshd
ENSSMAG00000020157pabpn16391.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSSMAG00000020157pabpn110097.414ENSCSEG00000008774pabpn110097.414Cynoglossus_semilaevis
ENSSMAG00000020157pabpn110094.218ENSCVAG00000003152pabpn110094.872Cyprinodon_variegatus
ENSSMAG00000020157pabpn110096.983ENSDARG00000045373pabpn110097.235Danio_rerio
ENSSMAG00000020157pabpn18153.476ENSDARG00000087996pabpn1l8659.184Danio_rerio
ENSSMAG00000020157pabpn18682.524ENSDNOG00000023682PABPN18670.833Dasypus_novemcinctus
ENSSMAG00000020157pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSSMAG00000020157pabpn18681.553ENSDORG00000028966-8669.697Dipodomys_ordii
ENSSMAG00000020157pabpn110057.983FBgn0005648Pabp29758.333Drosophila_melanogaster
ENSSMAG00000020157pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSSMAG00000020157pabpn18682.524ENSEASG00005011716PABPN18670.833Equus_asinus_asinus
ENSSMAG00000020157pabpn18581.863ENSECAG00000011652PABPN18570.356Equus_caballus
ENSSMAG00000020157pabpn18680.097ENSEEUG00000012973-6978.325Erinaceus_europaeus
ENSSMAG00000020157pabpn110095.359ENSELUG00000022654pabpn110095.359Esox_lucius
ENSSMAG00000020157pabpn18682.524ENSFCAG00000031922PABPN18670.833Felis_catus
ENSSMAG00000020157pabpn17182.143ENSFDAG00000018381BCL2L2-PABPN19482.143Fukomys_damarensis
ENSSMAG00000020157pabpn110095.259ENSFHEG00000007215pabpn110095.259Fundulus_heteroclitus
ENSSMAG00000020157pabpn110092.632ENSGMOG00000003922pabpn110095.439Gadus_morhua
ENSSMAG00000020157pabpn18382.828ENSGALG00000052930-6182.938Gallus_gallus
ENSSMAG00000020157pabpn110097.436ENSGAFG00000017099pabpn110097.436Gambusia_affinis
ENSSMAG00000020157pabpn110098.239ENSGACG00000002167pabpn110098.239Gasterosteus_aculeatus
ENSSMAG00000020157pabpn19975.966ENSGGOG00000022683-8476.395Gorilla_gorilla
ENSSMAG00000020157pabpn18969.712ENSGGOG00000039675-9165.833Gorilla_gorilla
ENSSMAG00000020157pabpn19466.239ENSGGOG00000025919-9869.128Gorilla_gorilla
ENSSMAG00000020157pabpn110098.707ENSHBUG00000019523pabpn110098.707Haplochromis_burtoni
ENSSMAG00000020157pabpn18770.048ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSSMAG00000020157pabpn17163.473ENSHGLG00000009842-9363.473Heterocephalus_glaber_female
ENSSMAG00000020157pabpn18682.039ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSSMAG00000020157pabpn18770.048ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSSMAG00000020157pabpn17170.060ENSHGLG00100018935-9472.674Heterocephalus_glaber_male
ENSSMAG00000020157pabpn19471.493ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSSMAG00000020157pabpn110097.414ENSHCOG00000004655pabpn110097.414Hippocampus_comes
ENSSMAG00000020157pabpn110089.224ENSIPUG00000000180-9989.224Ictalurus_punctatus
ENSSMAG00000020157pabpn110097.414ENSIPUG00000008085PABPN110097.414Ictalurus_punctatus
ENSSMAG00000020157pabpn17182.143ENSSTOG00000029847BCL2L2-PABPN19482.143Ictidomys_tridecemlineatus
ENSSMAG00000020157pabpn17182.143ENSJJAG00000023507Gm205219482.143Jaculus_jaculus
ENSSMAG00000020157pabpn110097.193ENSKMAG00000018748pabpn110097.193Kryptolebias_marmoratus
ENSSMAG00000020157pabpn110099.569ENSLBEG00000027266pabpn110099.569Labrus_bergylta
ENSSMAG00000020157pabpn17588.764ENSLACG00000000646pabpn18585.052Latimeria_chalumnae
ENSSMAG00000020157pabpn19066.355ENSLOCG00000004694pabpn1l9966.355Lepisosteus_oculatus
ENSSMAG00000020157pabpn110092.632ENSLOCG00000000796pabpn110092.982Lepisosteus_oculatus
ENSSMAG00000020157pabpn16582.781ENSLAFG00000031227-10082.237Loxodonta_africana
ENSSMAG00000020157pabpn16174.648ENSMFAG00000031355-9974.648Macaca_fascicularis
ENSSMAG00000020157pabpn19972.532ENSMFAG00000032183BCL2L2-PABPN19482.143Macaca_fascicularis
ENSSMAG00000020157pabpn18668.293ENSMMUG00000048382-8958.889Macaca_mulatta
ENSSMAG00000020157pabpn19972.532ENSMMUG00000014747BCL2L2-PABPN110082.313Macaca_mulatta
ENSSMAG00000020157pabpn17969.355ENSMNEG00000035750-9974.648Macaca_nemestrina
ENSSMAG00000020157pabpn19975.966ENSMNEG00000045065BCL2L2-PABPN18476.395Macaca_nemestrina
ENSSMAG00000020157pabpn19972.532ENSMLEG00000043862BCL2L2-PABPN19482.143Mandrillus_leucophaeus
ENSSMAG00000020157pabpn17266.467ENSMLEG00000034623-9972.535Mandrillus_leucophaeus
ENSSMAG00000020157pabpn110098.944ENSMAMG00000007979pabpn110098.944Mastacembelus_armatus
ENSSMAG00000020157pabpn110098.944ENSMZEG00005011904pabpn110098.944Maylandia_zebra
ENSSMAG00000020157pabpn19972.532ENSMAUG00000007383Gm205218770.611Mesocricetus_auratus
ENSSMAG00000020157pabpn19976.395ENSMICG00000010002BCL2L2-PABPN18477.119Microcebus_murinus
ENSSMAG00000020157pabpn19972.103ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSSMAG00000020157pabpn110099.296ENSMMOG00000005405pabpn110099.296Mola_mola
ENSSMAG00000020157pabpn18579.208ENSMODG00000004535-8269.841Monodelphis_domestica
ENSSMAG00000020157pabpn110098.592ENSMALG00000019612pabpn110098.592Monopterus_albus
ENSSMAG00000020157pabpn18681.068MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSSMAG00000020157pabpn19971.674MGP_CAROLIEiJ_G0019276Gm205217071.674Mus_caroli
ENSSMAG00000020157pabpn19972.103ENSMUSG00000092232Gm205217072.103Mus_musculus
ENSSMAG00000020157pabpn18681.553ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSSMAG00000020157pabpn18681.553MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSSMAG00000020157pabpn19972.103MGP_PahariEiJ_G0030294Gm205217072.103Mus_pahari
ENSSMAG00000020157pabpn19972.103MGP_SPRETEiJ_G0020165Gm205217072.103Mus_spretus
ENSSMAG00000020157pabpn18681.553MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSSMAG00000020157pabpn16682.051ENSMPUG00000006775-9282.051Mustela_putorius_furo
ENSSMAG00000020157pabpn18879.524ENSMLUG00000012452-8271.032Myotis_lucifugus
ENSSMAG00000020157pabpn18481.313ENSMLUG00000028677-8573.305Myotis_lucifugus
ENSSMAG00000020157pabpn18183.158ENSMLUG00000003800-10083.158Myotis_lucifugus
ENSSMAG00000020157pabpn19972.961ENSNGAG00000019529Gm205217072.961Nannospalax_galili
ENSSMAG00000020157pabpn110098.592ENSNBRG00000023955pabpn110098.864Neolamprologus_brichardi
ENSSMAG00000020157pabpn18669.268ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSSMAG00000020157pabpn19972.532ENSNLEG00000015007-7482.297Nomascus_leucogenys
ENSSMAG00000020157pabpn16460.811ENSNLEG00000035292-9960.811Nomascus_leucogenys
ENSSMAG00000020157pabpn19972.103ENSODEG00000002083BCL2L2-PABPN16881.818Octodon_degus
ENSSMAG00000020157pabpn18674.384ENSODEG00000003739-8862.646Octodon_degus
ENSSMAG00000020157pabpn17672.626ENSODEG00000011555-8971.429Octodon_degus
ENSSMAG00000020157pabpn110098.592ENSONIG00000008112pabpn110098.592Oreochromis_niloticus
ENSSMAG00000020157pabpn16384.354ENSOANG00000009218-10084.354Ornithorhynchus_anatinus
ENSSMAG00000020157pabpn18682.039ENSOCUG00000016174PABPN19570.611Oryctolagus_cuniculus
ENSSMAG00000020157pabpn110097.535ENSORLG00000027900pabpn110097.535Oryzias_latipes
ENSSMAG00000020157pabpn19997.817ENSORLG00020004681pabpn110094.863Oryzias_latipes_hni
ENSSMAG00000020157pabpn110098.276ENSORLG00015000018pabpn110098.276Oryzias_latipes_hsok
ENSSMAG00000020157pabpn110098.239ENSOMEG00000016618pabpn110098.239Oryzias_melastigma
ENSSMAG00000020157pabpn18682.524ENSOGAG00000008710PABPN18670.833Otolemur_garnettii
ENSSMAG00000020157pabpn19972.532ENSOARG00000019336BCL2L2-PABPN16472.532Ovis_aries
ENSSMAG00000020157pabpn19972.532ENSPPAG00000028984BCL2L2-PABPN19282.051Pan_paniscus
ENSSMAG00000020157pabpn17167.470ENSPPAG00000039421-9367.470Pan_paniscus
ENSSMAG00000020157pabpn18682.524ENSPPRG00000010567PABPN18670.833Panthera_pardus
ENSSMAG00000020157pabpn17182.143ENSPTIG00000001063BCL2L2-PABPN19482.143Panthera_tigris_altaica
ENSSMAG00000020157pabpn19975.966ENSPTRG00000006167BCL2L28476.395Pan_troglodytes
ENSSMAG00000020157pabpn110063.248ENSPTRG00000047273-9360.714Pan_troglodytes
ENSSMAG00000020157pabpn18469.697ENSPANG00000023326-9975.352Papio_anubis
ENSSMAG00000020157pabpn19975.966ENSPANG00000021100BCL2L2-PABPN18476.395Papio_anubis
ENSSMAG00000020157pabpn110091.845ENSPKIG00000018052pabpn110095.279Paramormyrops_kingsleyae
ENSSMAG00000020157pabpn110096.127ENSPKIG00000008144-10096.127Paramormyrops_kingsleyae
ENSSMAG00000020157pabpn17169.512ENSPKIG00000008340pabpn1l8667.039Paramormyrops_kingsleyae
ENSSMAG00000020157pabpn15876.866ENSPSIG00000011959-9477.444Pelodiscus_sinensis
ENSSMAG00000020157pabpn19598.182ENSPMGG00000022027pabpn110092.606Periophthalmus_magnuspinnatus
ENSSMAG00000020157pabpn19972.532ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSSMAG00000020157pabpn17975.806ENSPMAG00000006212pabpn19965.041Petromyzon_marinus
ENSSMAG00000020157pabpn18680.000ENSPCIG00000027751-8670.455Phascolarctos_cinereus
ENSSMAG00000020157pabpn110097.009ENSPFOG00000010351pabpn19997.009Poecilia_formosa
ENSSMAG00000020157pabpn110097.552ENSPLAG00000022696pabpn110097.552Poecilia_latipinna
ENSSMAG00000020157pabpn110097.009ENSPMEG00000020856pabpn110097.009Poecilia_mexicana
ENSSMAG00000020157pabpn110097.902ENSPREG00000011278pabpn110097.902Poecilia_reticulata
ENSSMAG00000020157pabpn18182.474ENSPPYG00000005663PABPN18970.238Pongo_abelii
ENSSMAG00000020157pabpn17969.271ENSPCAG00000005902PABPN18460.000Procavia_capensis
ENSSMAG00000020157pabpn19976.395ENSPCOG00000028047BCL2L2-PABPN18477.119Propithecus_coquereli
ENSSMAG00000020157pabpn18880.861ENSPVAG00000005270PABPN18669.582Pteropus_vampyrus
ENSSMAG00000020157pabpn110098.707ENSPNYG00000013182pabpn110098.707Pundamilia_nyererei
ENSSMAG00000020157pabpn110097.845ENSPNAG00000023526pabpn110097.845Pygocentrus_nattereri
ENSSMAG00000020157pabpn18862.319ENSPNAG00000021666pabpn1l9565.641Pygocentrus_nattereri
ENSSMAG00000020157pabpn18682.039ENSRNOG00000042195Pabpn18570.611Rattus_norvegicus
ENSSMAG00000020157pabpn18871.292ENSRBIG00000042811-9567.401Rhinopithecus_bieti
ENSSMAG00000020157pabpn19471.946ENSRBIG00000040762BCL2L2-PABPN16871.946Rhinopithecus_bieti
ENSSMAG00000020157pabpn18971.698ENSRBIG00000039547-8266.518Rhinopithecus_bieti
ENSSMAG00000020157pabpn19466.964ENSRROG00000040409-8266.964Rhinopithecus_roxellana
ENSSMAG00000020157pabpn19471.946ENSRROG00000045535BCL2L2-PABPN19482.143Rhinopithecus_roxellana
ENSSMAG00000020157pabpn18867.773ENSRROG00000036409-7064.629Rhinopithecus_roxellana
ENSSMAG00000020157pabpn19968.699ENSSBOG00000026930BCL2L2-PABPN19282.051Saimiri_boliviensis_boliviensis
ENSSMAG00000020157pabpn19962.185ENSSHAG00000007707-9958.824Sarcophilus_harrisii
ENSSMAG00000020157pabpn18181.481ENSSHAG00000014841-8783.684Sarcophilus_harrisii
ENSSMAG00000020157pabpn16173.944ENSSFOG00015015833pabpn1l8466.120Scleropages_formosus
ENSSMAG00000020157pabpn110090.129ENSSFOG00015012565pabpn110090.129Scleropages_formosus
ENSSMAG00000020157pabpn110096.552ENSSFOG00015014718pabpn110096.552Scleropages_formosus
ENSSMAG00000020157pabpn110098.944ENSSDUG00000020582pabpn110098.944Seriola_dumerili
ENSSMAG00000020157pabpn110099.569ENSSLDG00000007118pabpn110099.569Seriola_lalandi_dorsalis
ENSSMAG00000020157pabpn17184.524ENSSPUG00000018308-9484.524Sphenodon_punctatus
ENSSMAG00000020157pabpn110097.895ENSSPAG00000021658pabpn110097.895Stegastes_partitus
ENSSMAG00000020157pabpn19262.963ENSSSCG00000034805-7959.048Sus_scrofa
ENSSMAG00000020157pabpn19972.532ENSSSCG00000002023PABPN18670.833Sus_scrofa
ENSSMAG00000020157pabpn110097.845ENSTRUG00000023664pabpn110097.845Takifugu_rubripes
ENSSMAG00000020157pabpn19293.488ENSTNIG00000005369pabpn19398.010Tetraodon_nigroviridis
ENSSMAG00000020157pabpn18682.524ENSUAMG00000024460PABPN18670.833Ursus_americanus
ENSSMAG00000020157pabpn19972.532ENSUMAG00000014288BCL2L2-PABPN17072.532Ursus_maritimus
ENSSMAG00000020157pabpn19972.532ENSVVUG00000019912BCL2L2-PABPN17682.990Vulpes_vulpes
ENSSMAG00000020157pabpn18486.224ENSXETG00000014597pabpn17382.870Xenopus_tropicalis
ENSSMAG00000020157pabpn17586.286ENSXCOG00000005158pabpn19886.286Xiphophorus_couchianus
ENSSMAG00000020157pabpn110097.863ENSXMAG00000006196pabpn110097.863Xiphophorus_maculatus

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