EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000020311 (Gene tree)
Gene ID: -
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: RAB42%2C member RAS oncogene family a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 2239 bases
Position: chr7:22226059-22228297
Accession: ZDB-GENE-040426-1983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000033148	MMR_HSR1	PF01926.23	8.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000033565	-	657	-	ENSSMAP00000033148	218 (aa)	-	A0A2U9BL95

Gene Model

Click here to download ENSSMAG00000020311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000020311	rab42a	76	41.818	ENSSMAG00000000660	rab35b	81	41.818
ENSSMAG00000020311	rab42a	78	39.053	ENSSMAG00000016376	-	84	39.053
ENSSMAG00000020311	rab42a	80	41.714	ENSSMAG00000017528	rab1ab	87	41.573
ENSSMAG00000020311	rab42a	95	38.942	ENSSMAG00000002500	rab30	97	38.942
ENSSMAG00000020311	rab42a	85	31.183	ENSSMAG00000013303	rheb	94	31.183
ENSSMAG00000020311	rab42a	57	30.159	ENSSMAG00000015130	arl8bb	65	30.159
ENSSMAG00000020311	rab42a	74	30.864	ENSSMAG00000004606	rabl2	70	30.864
ENSSMAG00000020311	rab42a	76	40.606	ENSSMAG00000011814	rab18b	80	40.606
ENSSMAG00000020311	rab42a	74	35.976	ENSSMAG00000013945	si:dkey-13a21.4	79	35.976
ENSSMAG00000020311	rab42a	75	43.636	ENSSMAG00000009722	rab25a	77	43.636
ENSSMAG00000020311	rab42a	69	31.788	ENSSMAG00000008745	hrasb	85	31.098
ENSSMAG00000020311	rab42a	69	42.763	ENSSMAG00000015955	rab33ba	70	40.351
ENSSMAG00000020311	rab42a	75	37.195	ENSSMAG00000009229	rab5aa	76	37.654
ENSSMAG00000020311	rab42a	72	34.810	ENSSMAG00000006341	rab23	74	35.294
ENSSMAG00000020311	rab42a	72	37.267	ENSSMAG00000017426	rab9a	74	37.267
ENSSMAG00000020311	rab42a	78	43.860	ENSSMAG00000016183	rab25b	80	43.860
ENSSMAG00000020311	rab42a	78	41.279	ENSSMAG00000012678	rab12	70	41.279
ENSSMAG00000020311	rab42a	100	37.838	ENSSMAG00000004416	-	100	37.838
ENSSMAG00000020311	rab42a	98	38.318	ENSSMAG00000003166	rab14	97	38.318
ENSSMAG00000020311	rab42a	78	33.529	ENSSMAG00000014984	rras	85	33.529
ENSSMAG00000020311	rab42a	72	39.490	ENSSMAG00000000335	rab6bb	77	39.103
ENSSMAG00000020311	rab42a	75	34.756	ENSSMAG00000010140	rab22a	84	34.756
ENSSMAG00000020311	rab42a	72	39.490	ENSSMAG00000017205	-	75	39.490
ENSSMAG00000020311	rab42a	72	39.490	ENSSMAG00000015774	rab41	73	39.490
ENSSMAG00000020311	rab42a	75	38.690	ENSSMAG00000006709	rab9b	80	38.690
ENSSMAG00000020311	rab42a	96	38.710	ENSSMAG00000019773	rab15	96	38.710
ENSSMAG00000020311	rab42a	84	40.437	ENSSMAG00000018613	-	83	40.437
ENSSMAG00000020311	rab42a	72	39.375	ENSSMAG00000013733	rab33a	58	39.375
ENSSMAG00000020311	rab42a	84	40.217	ENSSMAG00000009201	rab1ba	91	40.217
ENSSMAG00000020311	rab42a	98	38.785	ENSSMAG00000018454	-	97	38.785
ENSSMAG00000020311	rab42a	74	35.542	ENSSMAG00000011579	RAB7A	79	35.542
ENSSMAG00000020311	rab42a	67	42.105	ENSSMAG00000012178	-	62	42.105
ENSSMAG00000020311	rab42a	100	53.670	ENSSMAG00000001953	rab39bb	100	53.670
ENSSMAG00000020311	rab42a	87	45.789	ENSSMAG00000001002	rab2a	89	45.789
ENSSMAG00000020311	rab42a	80	40.000	ENSSMAG00000011769	si:dkey-16l2.16	77	40.000
ENSSMAG00000020311	rab42a	76	36.095	ENSSMAG00000014078	RAB9A	84	36.095
ENSSMAG00000020311	rab42a	77	31.737	ENSSMAG00000001964	rhebl1	88	31.737
ENSSMAG00000020311	rab42a	75	38.415	ENSSMAG00000007323	rab5c	74	38.415
ENSSMAG00000020311	rab42a	73	32.919	ENSSMAG00000020045	rab36	61	32.919
ENSSMAG00000020311	rab42a	74	40.373	ENSSMAG00000005651	-	75	40.373
ENSSMAG00000020311	rab42a	74	34.940	ENSSMAG00000001414	-	70	34.940
ENSSMAG00000020311	rab42a	67	41.892	ENSSMAG00000002229	zgc:101559	62	41.892
ENSSMAG00000020311	rab42a	82	42.135	ENSSMAG00000021049	-	87	42.135
ENSSMAG00000020311	rab42a	69	34.868	ENSSMAG00000004806	si:ch73-116o1.2	79	34.337
ENSSMAG00000020311	rab42a	73	31.056	ENSSMAG00000007370	kras	92	30.460
ENSSMAG00000020311	rab42a	77	44.311	ENSSMAG00000002569	-	90	39.766
ENSSMAG00000020311	rab42a	84	40.437	ENSSMAG00000004922	rab11bb	83	40.437
ENSSMAG00000020311	rab42a	93	38.235	ENSSMAG00000004133	rab11a	94	38.235
ENSSMAG00000020311	rab42a	78	30.636	ENSSMAG00000019926	rab34b	74	30.636
ENSSMAG00000020311	rab42a	76	39.394	ENSSMAG00000002969	rab18a	80	39.394
ENSSMAG00000020311	rab42a	84	42.077	ENSSMAG00000016206	rab11al	84	42.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000020311	rab42a	100	94.037	ENSAPOG00000009188	rab42a	100	94.037	Acanthochromis_polyacanthus
ENSSMAG00000020311	rab42a	100	94.495	ENSACIG00000003102	rab42a	100	94.495	Amphilophus_citrinellus
ENSSMAG00000020311	rab42a	100	93.578	ENSAOCG00000012921	rab42a	83	93.578	Amphiprion_ocellaris
ENSSMAG00000020311	rab42a	100	93.578	ENSAPEG00000007713	rab42a	83	93.578	Amphiprion_percula
ENSSMAG00000020311	rab42a	100	92.202	ENSATEG00000009052	rab42a	100	92.202	Anabas_testudineus
ENSSMAG00000020311	rab42a	100	94.037	ENSACLG00000007514	rab42a	100	94.037	Astatotilapia_calliptera
ENSSMAG00000020311	rab42a	100	88.532	ENSAMXG00000032729	rab42a	100	88.532	Astyanax_mexicanus
ENSSMAG00000020311	rab42a	100	92.202	ENSCSEG00000010582	rab42a	100	92.202	Cynoglossus_semilaevis
ENSSMAG00000020311	rab42a	100	89.450	ENSDARG00000034215	rab42a	100	89.450	Danio_rerio
ENSSMAG00000020311	rab42a	100	46.119	ENSDARG00000102580	CU571310.1	99	46.119	Danio_rerio
ENSSMAG00000020311	rab42a	100	88.532	ENSELUG00000010345	rab42a	100	88.532	Esox_lucius
ENSSMAG00000020311	rab42a	100	94.037	ENSFHEG00000013106	rab42a	100	94.037	Fundulus_heteroclitus
ENSSMAG00000020311	rab42a	100	93.578	ENSGAFG00000002141	rab42a	100	93.578	Gambusia_affinis
ENSSMAG00000020311	rab42a	100	94.037	ENSHBUG00000015126	rab42a	82	94.037	Haplochromis_burtoni
ENSSMAG00000020311	rab42a	100	85.780	ENSIPUG00000011376	rab42a	100	85.780	Ictalurus_punctatus
ENSSMAG00000020311	rab42a	100	93.119	ENSKMAG00000007267	rab42a	100	93.119	Kryptolebias_marmoratus
ENSSMAG00000020311	rab42a	100	95.413	ENSLBEG00000001193	rab42a	100	95.413	Labrus_bergylta
ENSSMAG00000020311	rab42a	100	63.761	ENSLACG00000012755	-	100	63.761	Latimeria_chalumnae
ENSSMAG00000020311	rab42a	100	81.651	ENSLOCG00000003453	rab42a	100	81.651	Lepisosteus_oculatus
ENSSMAG00000020311	rab42a	100	51.142	ENSLOCG00000015825	-	99	51.142	Lepisosteus_oculatus
ENSSMAG00000020311	rab42a	100	95.872	ENSMAMG00000002296	rab42a	100	95.872	Mastacembelus_armatus
ENSSMAG00000020311	rab42a	100	94.037	ENSMZEG00005012460	rab42a	82	94.037	Maylandia_zebra
ENSSMAG00000020311	rab42a	100	91.743	ENSMMOG00000014358	rab42a	100	91.743	Mola_mola
ENSSMAG00000020311	rab42a	100	94.037	ENSNBRG00000021487	rab42a	82	94.037	Neolamprologus_brichardi
ENSSMAG00000020311	rab42a	100	94.495	ENSORLG00000022335	rab42a	100	94.495	Oryzias_latipes
ENSSMAG00000020311	rab42a	100	94.495	ENSORLG00020013895	rab42a	100	94.495	Oryzias_latipes_hni
ENSSMAG00000020311	rab42a	100	94.495	ENSORLG00015004273	rab42a	100	94.495	Oryzias_latipes_hsok
ENSSMAG00000020311	rab42a	100	94.495	ENSOMEG00000020418	rab42a	100	94.495	Oryzias_melastigma
ENSSMAG00000020311	rab42a	100	77.626	ENSPKIG00000021215	-	100	77.626	Paramormyrops_kingsleyae
ENSSMAG00000020311	rab42a	89	48.454	ENSPKIG00000015234	-	93	48.454	Paramormyrops_kingsleyae
ENSSMAG00000020311	rab42a	90	94.924	ENSPMGG00000024112	rab42a	90	94.924	Periophthalmus_magnuspinnatus
ENSSMAG00000020311	rab42a	100	93.119	ENSPFOG00000004838	rab42a	82	93.119	Poecilia_formosa
ENSSMAG00000020311	rab42a	100	93.578	ENSPLAG00000005628	rab42a	100	93.578	Poecilia_latipinna
ENSSMAG00000020311	rab42a	100	93.119	ENSPMEG00000019497	rab42a	100	93.119	Poecilia_mexicana
ENSSMAG00000020311	rab42a	100	93.578	ENSPREG00000013962	rab42a	100	93.578	Poecilia_reticulata
ENSSMAG00000020311	rab42a	100	94.037	ENSPNYG00000010325	rab42a	82	94.037	Pundamilia_nyererei
ENSSMAG00000020311	rab42a	100	88.073	ENSPNAG00000016567	rab42a	100	88.073	Pygocentrus_nattereri
ENSSMAG00000020311	rab42a	100	45.205	ENSSFOG00015016000	-	97	45.205	Scleropages_formosus
ENSSMAG00000020311	rab42a	100	83.028	ENSSFOG00015020732	rab42a	100	83.028	Scleropages_formosus
ENSSMAG00000020311	rab42a	100	96.330	ENSSDUG00000011851	rab42a	100	96.330	Seriola_dumerili
ENSSMAG00000020311	rab42a	100	96.330	ENSSLDG00000020354	rab42a	100	96.330	Seriola_lalandi_dorsalis
ENSSMAG00000020311	rab42a	100	95.413	ENSSPAG00000016167	rab42a	100	95.413	Stegastes_partitus
ENSSMAG00000020311	rab42a	100	94.954	ENSTRUG00000010224	rab42a	100	94.954	Takifugu_rubripes
ENSSMAG00000020311	rab42a	100	94.037	ENSXCOG00000003428	rab42a	100	94.037	Xiphophorus_couchianus
ENSSMAG00000020311	rab42a	100	94.037	ENSXMAG00000028376	rab42a	100	94.037	Xiphophorus_maculatus