EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000020328 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 7862 bases
Position: chr18:14220983-14228844
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000033193	RIO1	PF01163.22	4.8e-06	1	1
ENSSMAP00000033183	RIO1	PF01163.22	4.8e-06	1	1
ENSSMAP00000033188	RIO1	PF01163.22	4.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000033603	-	3336	-	ENSSMAP00000033183	850 (aa)	-	-
ENSSMAT00000033614	-	2741	-	ENSSMAP00000033193	841 (aa)	-	-
ENSSMAT00000033609	-	2786	-	ENSSMAP00000033188	856 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000020328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000020328	-	99	51.429	ENSSMAG00000006784	mylk5	99	51.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000020328	-	94	60.310	ENSAPOG00000023231	mylk5	99	52.941	Acanthochromis_polyacanthus
ENSSMAG00000020328	-	99	76.728	ENSAPOG00000019520	-	99	76.843	Acanthochromis_polyacanthus
ENSSMAG00000020328	-	100	70.070	ENSACIG00000024477	-	100	70.686	Amphilophus_citrinellus
ENSSMAG00000020328	-	99	76.728	ENSAOCG00000024465	-	99	76.728	Amphiprion_ocellaris
ENSSMAG00000020328	-	99	52.721	ENSAOCG00000014130	mylk5	97	56.718	Amphiprion_ocellaris
ENSSMAG00000020328	-	99	74.316	ENSAPEG00000014652	-	99	74.316	Amphiprion_percula
ENSSMAG00000020328	-	99	52.948	ENSAPEG00000017851	mylk5	97	56.718	Amphiprion_percula
ENSSMAG00000020328	-	99	52.983	ENSATEG00000002426	mylk5	99	52.983	Anabas_testudineus
ENSSMAG00000020328	-	99	52.149	ENSACLG00000003301	mylk5	99	54.202	Astatotilapia_calliptera
ENSSMAG00000020328	-	99	70.968	ENSACLG00000007583	-	99	70.968	Astatotilapia_calliptera
ENSSMAG00000020328	-	78	61.756	ENSAMXG00000019493	-	90	62.614	Astyanax_mexicanus
ENSSMAG00000020328	-	79	56.018	ENSCSEG00000017281	mylk5	89	57.187	Cynoglossus_semilaevis
ENSSMAG00000020328	-	99	53.397	ENSCVAG00000022813	mylk5	99	53.397	Cyprinodon_variegatus
ENSSMAG00000020328	-	100	69.686	ENSCVAG00000022136	-	99	69.686	Cyprinodon_variegatus
ENSSMAG00000020328	-	99	53.919	ENSFHEG00000011638	-	99	53.919	Fundulus_heteroclitus
ENSSMAG00000020328	-	100	69.026	ENSFHEG00000010974	-	100	69.026	Fundulus_heteroclitus
ENSSMAG00000020328	-	99	51.712	ENSGAFG00000000269	mylk5	99	51.712	Gambusia_affinis
ENSSMAG00000020328	-	77	56.372	ENSGACG00000008527	mylk5	99	56.372	Gasterosteus_aculeatus
ENSSMAG00000020328	-	99	53.271	ENSHBUG00000002257	mylk5	99	53.271	Haplochromis_burtoni
ENSSMAG00000020328	-	99	68.892	ENSHBUG00000016459	-	99	68.892	Haplochromis_burtoni
ENSSMAG00000020328	-	99	62.201	ENSHCOG00000015710	-	99	62.201	Hippocampus_comes
ENSSMAG00000020328	-	94	53.769	ENSIPUG00000012659	mylk5	98	53.028	Ictalurus_punctatus
ENSSMAG00000020328	-	99	53.257	ENSKMAG00000019605	mylk5	99	53.257	Kryptolebias_marmoratus
ENSSMAG00000020328	-	100	69.711	ENSKMAG00000016742	-	100	69.711	Kryptolebias_marmoratus
ENSSMAG00000020328	-	99	54.038	ENSLBEG00000003526	mylk5	99	54.038	Labrus_bergylta
ENSSMAG00000020328	-	99	74.852	ENSLBEG00000004115	-	99	74.852	Labrus_bergylta
ENSSMAG00000020328	-	99	52.781	ENSMAMG00000000610	mylk5	99	52.781	Mastacembelus_armatus
ENSSMAG00000020328	-	99	52.262	ENSMZEG00005022663	mylk5	99	52.262	Maylandia_zebra
ENSSMAG00000020328	-	99	53.373	ENSMMOG00000020584	mylk5	99	53.373	Mola_mola
ENSSMAG00000020328	-	93	54.233	ENSMALG00000004945	mylk5	94	54.310	Monopterus_albus
ENSSMAG00000020328	-	100	76.107	ENSMALG00000022416	-	95	76.932	Monopterus_albus
ENSSMAG00000020328	-	99	71.445	ENSONIG00000016230	-	100	71.445	Oreochromis_niloticus
ENSSMAG00000020328	-	53	65.101	ENSONIG00000019875	-	97	65.101	Oreochromis_niloticus
ENSSMAG00000020328	-	93	55.130	ENSONIG00000001203	mylk5	97	65.101	Oreochromis_niloticus
ENSSMAG00000020328	-	99	51.575	ENSPFOG00000013597	mylk5	99	51.575	Poecilia_formosa
ENSSMAG00000020328	-	99	52.251	ENSPLAG00000023779	mylk5	99	52.251	Poecilia_latipinna
ENSSMAG00000020328	-	99	52.079	ENSPMEG00000023897	mylk5	99	52.079	Poecilia_mexicana
ENSSMAG00000020328	-	100	68.256	ENSPREG00000003222	-	100	68.256	Poecilia_reticulata
ENSSMAG00000020328	-	76	60.267	ENSPREG00000009707	mylk5	89	60.267	Poecilia_reticulata
ENSSMAG00000020328	-	93	53.309	ENSPNYG00000010046	mylk5	95	53.186	Pundamilia_nyererei
ENSSMAG00000020328	-	99	68.465	ENSPNYG00000019509	-	99	68.465	Pundamilia_nyererei
ENSSMAG00000020328	-	77	63.231	ENSSFOG00015004885	-	91	63.231	Scleropages_formosus
ENSSMAG00000020328	-	99	81.398	ENSSDUG00000020847	-	99	81.398	Seriola_dumerili
ENSSMAG00000020328	-	99	81.250	ENSSLDG00000019897	-	99	81.250	Seriola_lalandi_dorsalis
ENSSMAG00000020328	-	92	78.250	ENSSPAG00000019068	-	99	78.250	Stegastes_partitus
ENSSMAG00000020328	-	99	54.731	ENSSPAG00000020815	mylk5	99	54.731	Stegastes_partitus
ENSSMAG00000020328	-	99	49.661	ENSTRUG00000015150	mylk5	99	49.943	Takifugu_rubripes
ENSSMAG00000020328	-	70	56.551	ENSTNIG00000011699	mylk5	99	56.551	Tetraodon_nigroviridis
ENSSMAG00000020328	-	96	66.294	ENSXCOG00000005927	-	99	66.294	Xiphophorus_couchianus
ENSSMAG00000020328	-	99	51.602	ENSXMAG00000007789	mylk5	99	51.602	Xiphophorus_maculatus
ENSSMAG00000020328	-	87	68.583	ENSXMAG00000015589	-	94	68.583	Xiphophorus_maculatus