EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000020346 (Gene tree)
Gene ID: -
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA-binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 12678 bases
Position: chr21:7822471-7835148
Accession: ZDB-GENE-060312-35
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000033212	RRM_1	PF00076.22	2.8e-15	1	2
ENSSMAP00000033212	RRM_1	PF00076.22	2.8e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000033634	-	2510	-	ENSSMAP00000033212	515 (aa)	-	A0A2U9CWE8

Gene Model

Click here to download ENSSMAG00000020346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000020346	rnpc3	97	50.874	ENSG00000185946	RNPC3	95	52.000	Homo_sapiens
ENSSMAG00000020346	rnpc3	100	81.748	ENSAPOG00000017371	rnpc3	100	81.748	Acanthochromis_polyacanthus
ENSSMAG00000020346	rnpc3	97	51.830	ENSAMEG00000001694	RNPC3	95	52.579	Ailuropoda_melanoleuca
ENSSMAG00000020346	rnpc3	99	76.367	ENSACIG00000021043	rnpc3	99	76.367	Amphilophus_citrinellus
ENSSMAG00000020346	rnpc3	100	82.136	ENSAOCG00000014052	rnpc3	98	82.136	Amphiprion_ocellaris
ENSSMAG00000020346	rnpc3	100	82.136	ENSAPEG00000008739	rnpc3	98	82.136	Amphiprion_percula
ENSSMAG00000020346	rnpc3	100	82.785	ENSATEG00000021263	rnpc3	100	82.785	Anabas_testudineus
ENSSMAG00000020346	rnpc3	89	54.113	ENSAPLG00000015605	RNPC3	99	55.195	Anas_platyrhynchos
ENSSMAG00000020346	rnpc3	96	54.418	ENSACAG00000002029	RNPC3	97	52.953	Anolis_carolinensis
ENSSMAG00000020346	rnpc3	97	50.581	ENSANAG00000019950	RNPC3	95	51.297	Aotus_nancymaae
ENSSMAG00000020346	rnpc3	99	79.102	ENSACLG00000014702	rnpc3	99	79.102	Astatotilapia_calliptera
ENSSMAG00000020346	rnpc3	99	64.023	ENSAMXG00000033372	rnpc3	99	64.023	Astyanax_mexicanus
ENSSMAG00000020346	rnpc3	97	51.456	ENSBTAG00000019091	RNPC3	95	52.400	Bos_taurus
ENSSMAG00000020346	rnpc3	97	51.697	ENSCJAG00000035686	RNPC3	95	51.697	Callithrix_jacchus
ENSSMAG00000020346	rnpc3	97	50.581	ENSCAFG00000019972	RNPC3	95	52.295	Canis_familiaris
ENSSMAG00000020346	rnpc3	97	50.772	ENSCAFG00020011300	RNPC3	95	52.485	Canis_lupus_dingo
ENSSMAG00000020346	rnpc3	97	52.590	ENSCHIG00000020361	RNPC3	95	52.096	Capra_hircus
ENSSMAG00000020346	rnpc3	97	52.381	ENSTSYG00000030256	RNPC3	95	52.096	Carlito_syrichta
ENSSMAG00000020346	rnpc3	86	45.190	ENSCAPG00000013600	RNPC3	99	44.519	Cavia_aperea
ENSSMAG00000020346	rnpc3	97	50.000	ENSCPOG00000031638	RNPC3	95	50.895	Cavia_porcellus
ENSSMAG00000020346	rnpc3	97	50.775	ENSCCAG00000024301	RNPC3	95	51.497	Cebus_capucinus
ENSSMAG00000020346	rnpc3	97	50.775	ENSCATG00000002086	RNPC3	95	51.896	Cercocebus_atys
ENSSMAG00000020346	rnpc3	97	42.400	ENSCATG00000035930	-	95	40.681	Cercocebus_atys
ENSSMAG00000020346	rnpc3	97	50.000	ENSCLAG00000005169	RNPC3	95	51.800	Chinchilla_lanigera
ENSSMAG00000020346	rnpc3	97	50.775	ENSCSAG00000001519	RNPC3	95	51.896	Chlorocebus_sabaeus
ENSSMAG00000020346	rnpc3	97	55.268	ENSCPBG00000028311	RNPC3	95	55.952	Chrysemys_picta_bellii
ENSSMAG00000020346	rnpc3	61	53.077	ENSCSAVG00000002800	-	76	53.077	Ciona_savignyi
ENSSMAG00000020346	rnpc3	97	51.158	ENSCANG00000031444	RNPC3	95	52.286	Colobus_angolensis_palliatus
ENSSMAG00000020346	rnpc3	97	51.267	ENSCGRG00001019276	Rnpc3	95	52.008	Cricetulus_griseus_chok1gshd
ENSSMAG00000020346	rnpc3	89	49.053	ENSCGRG00000000053	Rnpc3	99	49.783	Cricetulus_griseus_crigri
ENSSMAG00000020346	rnpc3	99	74.319	ENSCSEG00000013475	rnpc3	99	74.514	Cynoglossus_semilaevis
ENSSMAG00000020346	rnpc3	100	77.132	ENSCVAG00000002645	rnpc3	100	75.775	Cyprinodon_variegatus
ENSSMAG00000020346	rnpc3	98	63.511	ENSDARG00000011247	rnpc3	98	63.905	Danio_rerio
ENSSMAG00000020346	rnpc3	97	49.515	ENSDNOG00000044555	-	95	51.400	Dasypus_novemcinctus
ENSSMAG00000020346	rnpc3	97	49.903	ENSDNOG00000047498	-	95	51.800	Dasypus_novemcinctus
ENSSMAG00000020346	rnpc3	99	50.570	ENSDORG00000027343	Rnpc3	96	51.468	Dipodomys_ordii
ENSSMAG00000020346	rnpc3	97	48.362	ENSEBUG00000002068	rnpc3	97	47.977	Eptatretus_burgeri
ENSSMAG00000020346	rnpc3	97	50.969	ENSEASG00005015957	RNPC3	95	52.695	Equus_asinus_asinus
ENSSMAG00000020346	rnpc3	97	51.550	ENSECAG00000021148	RNPC3	95	52.295	Equus_caballus
ENSSMAG00000020346	rnpc3	99	68.381	ENSELUG00000002264	rnpc3	99	66.667	Esox_lucius
ENSSMAG00000020346	rnpc3	97	51.830	ENSFCAG00000024312	RNPC3	96	52.456	Felis_catus
ENSSMAG00000020346	rnpc3	89	55.292	ENSFALG00000002580	RNPC3	99	54.762	Ficedula_albicollis
ENSSMAG00000020346	rnpc3	97	50.386	ENSFDAG00000019948	RNPC3	95	51.292	Fukomys_damarensis
ENSSMAG00000020346	rnpc3	100	66.019	ENSFHEG00000020647	rnpc3	100	66.408	Fundulus_heteroclitus
ENSSMAG00000020346	rnpc3	100	66.988	ENSGMOG00000019213	rnpc3	99	65.830	Gadus_morhua
ENSSMAG00000020346	rnpc3	97	56.064	ENSGALG00000005162	RNPC3	88	55.777	Gallus_gallus
ENSSMAG00000020346	rnpc3	100	72.233	ENSGAFG00000017236	rnpc3	100	75.340	Gambusia_affinis
ENSSMAG00000020346	rnpc3	100	77.071	ENSGACG00000002048	rnpc3	99	78.420	Gasterosteus_aculeatus
ENSSMAG00000020346	rnpc3	97	55.666	ENSGAGG00000008438	RNPC3	95	55.490	Gopherus_agassizii
ENSSMAG00000020346	rnpc3	97	47.495	ENSGGOG00000026201	-	94	47.094	Gorilla_gorilla
ENSSMAG00000020346	rnpc3	82	77.083	ENSHBUG00000015966	rnpc3	85	77.083	Haplochromis_burtoni
ENSSMAG00000020346	rnpc3	97	50.769	ENSHGLG00000001708	RNPC3	95	51.497	Heterocephalus_glaber_female
ENSSMAG00000020346	rnpc3	97	50.769	ENSHGLG00100003005	RNPC3	95	51.497	Heterocephalus_glaber_male
ENSSMAG00000020346	rnpc3	99	73.346	ENSHCOG00000017135	rnpc3	100	73.346	Hippocampus_comes
ENSSMAG00000020346	rnpc3	99	64.660	ENSIPUG00000002916	rnpc3	99	62.718	Ictalurus_punctatus
ENSSMAG00000020346	rnpc3	97	50.581	ENSSTOG00000025020	RNPC3	95	52.096	Ictidomys_tridecemlineatus
ENSSMAG00000020346	rnpc3	97	50.778	ENSJJAG00000010203	Rnpc3	96	51.383	Jaculus_jaculus
ENSSMAG00000020346	rnpc3	99	76.758	ENSKMAG00000017358	rnpc3	99	72.070	Kryptolebias_marmoratus
ENSSMAG00000020346	rnpc3	100	74.369	ENSLBEG00000024901	rnpc3	98	75.534	Labrus_bergylta
ENSSMAG00000020346	rnpc3	99	54.280	ENSLACG00000005720	RNPC3	92	57.198	Latimeria_chalumnae
ENSSMAG00000020346	rnpc3	99	58.607	ENSLOCG00000007986	rnpc3	99	58.994	Lepisosteus_oculatus
ENSSMAG00000020346	rnpc3	97	52.124	ENSLAFG00000032342	RNPC3	95	52.976	Loxodonta_africana
ENSSMAG00000020346	rnpc3	97	50.775	ENSMFAG00000002004	RNPC3	95	51.896	Macaca_fascicularis
ENSSMAG00000020346	rnpc3	97	40.358	ENSMFAG00000002917	-	95	40.438	Macaca_fascicularis
ENSSMAG00000020346	rnpc3	97	50.581	ENSMMUG00000018039	RNPC3	95	51.697	Macaca_mulatta
ENSSMAG00000020346	rnpc3	79	47.895	ENSMMUG00000002098	-	85	48.947	Macaca_mulatta
ENSSMAG00000020346	rnpc3	97	47.287	ENSMNEG00000033950	RNPC3	95	48.902	Macaca_nemestrina
ENSSMAG00000020346	rnpc3	97	39.679	ENSMNEG00000029209	-	95	39.521	Macaca_nemestrina
ENSSMAG00000020346	rnpc3	97	42.346	ENSMLEG00000034644	-	95	41.211	Mandrillus_leucophaeus
ENSSMAG00000020346	rnpc3	97	50.775	ENSMLEG00000033628	RNPC3	95	51.896	Mandrillus_leucophaeus
ENSSMAG00000020346	rnpc3	100	74.951	ENSMAMG00000007496	rnpc3	100	70.291	Mastacembelus_armatus
ENSSMAG00000020346	rnpc3	99	79.264	ENSMZEG00005020233	rnpc3	99	79.264	Maylandia_zebra
ENSSMAG00000020346	rnpc3	89	54.681	ENSMGAG00000006381	RNPC3	99	55.460	Meleagris_gallopavo
ENSSMAG00000020346	rnpc3	97	51.845	ENSMAUG00000001358	Rnpc3	95	52.600	Mesocricetus_auratus
ENSSMAG00000020346	rnpc3	97	52.381	ENSMICG00000029591	RNPC3	95	52.096	Microcebus_murinus
ENSSMAG00000020346	rnpc3	97	51.838	ENSMOCG00000013423	Rnpc3	95	52.590	Microtus_ochrogaster
ENSSMAG00000020346	rnpc3	100	69.767	ENSMMOG00000005309	rnpc3	100	69.961	Mola_mola
ENSSMAG00000020346	rnpc3	97	51.896	ENSMODG00000002946	RNPC3	95	53.892	Monodelphis_domestica
ENSSMAG00000020346	rnpc3	99	78.947	ENSMALG00000015471	rnpc3	100	78.947	Monopterus_albus
ENSSMAG00000020346	rnpc3	97	51.644	MGP_CAROLIEiJ_G0025555	Rnpc3	96	52.390	Mus_caroli
ENSSMAG00000020346	rnpc3	97	51.068	ENSMUSG00000027981	Rnpc3	99	50.847	Mus_musculus
ENSSMAG00000020346	rnpc3	97	50.680	MGP_PahariEiJ_G0027001	Rnpc3	97	51.881	Mus_pahari
ENSSMAG00000020346	rnpc3	97	51.262	MGP_SPRETEiJ_G0026505	Rnpc3	96	52.400	Mus_spretus
ENSSMAG00000020346	rnpc3	97	51.456	ENSMPUG00000007349	RNPC3	95	53.000	Mustela_putorius_furo
ENSSMAG00000020346	rnpc3	97	51.262	ENSMLUG00000028743	RNPC3	95	52.800	Myotis_lucifugus
ENSSMAG00000020346	rnpc3	97	50.965	ENSNGAG00000010939	Rnpc3	95	52.485	Nannospalax_galili
ENSSMAG00000020346	rnpc3	99	79.297	ENSNBRG00000012196	rnpc3	96	79.297	Neolamprologus_brichardi
ENSSMAG00000020346	rnpc3	97	50.680	ENSNLEG00000012013	RNPC3	95	51.800	Nomascus_leucogenys
ENSSMAG00000020346	rnpc3	97	52.132	ENSODEG00000007612	RNPC3	95	52.200	Octodon_degus
ENSSMAG00000020346	rnpc3	99	80.273	ENSONIG00000004770	rnpc3	100	80.361	Oreochromis_niloticus
ENSSMAG00000020346	rnpc3	93	55.301	ENSOANG00000008220	RNPC3	100	53.112	Ornithorhynchus_anatinus
ENSSMAG00000020346	rnpc3	97	52.988	ENSOCUG00000004016	RNPC3	95	52.295	Oryctolagus_cuniculus
ENSSMAG00000020346	rnpc3	100	73.786	ENSORLG00000005694	rnpc3	100	72.039	Oryzias_latipes
ENSSMAG00000020346	rnpc3	100	74.757	ENSORLG00020005513	rnpc3	100	73.010	Oryzias_latipes_hni
ENSSMAG00000020346	rnpc3	100	74.369	ENSORLG00015002179	rnpc3	100	72.621	Oryzias_latipes_hsok
ENSSMAG00000020346	rnpc3	100	72.233	ENSOMEG00000017737	rnpc3	100	72.427	Oryzias_melastigma
ENSSMAG00000020346	rnpc3	97	52.976	ENSOGAG00000026182	RNPC3	95	52.695	Otolemur_garnettii
ENSSMAG00000020346	rnpc3	97	52.590	ENSOARG00000018719	RNPC3	95	52.096	Ovis_aries
ENSSMAG00000020346	rnpc3	97	46.429	ENSPPAG00000030278	-	95	47.695	Pan_paniscus
ENSSMAG00000020346	rnpc3	97	50.677	ENSPPAG00000037459	RNPC3	95	51.793	Pan_paniscus
ENSSMAG00000020346	rnpc3	97	51.830	ENSPPRG00000020246	RNPC3	96	52.456	Panthera_pardus
ENSSMAG00000020346	rnpc3	97	51.830	ENSPTIG00000009887	RNPC3	98	52.456	Panthera_tigris_altaica
ENSSMAG00000020346	rnpc3	97	50.969	ENSPTRG00000033902	RNPC3	95	52.096	Pan_troglodytes
ENSSMAG00000020346	rnpc3	96	46.371	ENSPTRG00000044227	-	95	46.774	Pan_troglodytes
ENSSMAG00000020346	rnpc3	97	50.874	ENSPANG00000012137	RNPC3	95	52.000	Papio_anubis
ENSSMAG00000020346	rnpc3	97	43.651	ENSPANG00000029957	-	96	42.147	Papio_anubis
ENSSMAG00000020346	rnpc3	99	61.240	ENSPKIG00000008828	rnpc3	99	62.016	Paramormyrops_kingsleyae
ENSSMAG00000020346	rnpc3	65	50.588	ENSPSIG00000007396	RNPC3	99	50.882	Pelodiscus_sinensis
ENSSMAG00000020346	rnpc3	99	61.165	ENSPMGG00000011742	rnpc3	100	61.748	Periophthalmus_magnuspinnatus
ENSSMAG00000020346	rnpc3	90	49.585	ENSPEMG00000020112	Rnpc3	99	50.649	Peromyscus_maniculatus_bairdii
ENSSMAG00000020346	rnpc3	97	52.871	ENSPCIG00000004415	-	95	54.365	Phascolarctos_cinereus
ENSSMAG00000020346	rnpc3	99	73.633	ENSPFOG00000009895	rnpc3	99	76.562	Poecilia_formosa
ENSSMAG00000020346	rnpc3	99	73.633	ENSPLAG00000012023	rnpc3	99	76.953	Poecilia_latipinna
ENSSMAG00000020346	rnpc3	99	74.074	ENSPMEG00000003663	rnpc3	99	76.758	Poecilia_mexicana
ENSSMAG00000020346	rnpc3	100	72.816	ENSPREG00000010206	rnpc3	100	76.117	Poecilia_reticulata
ENSSMAG00000020346	rnpc3	81	46.682	ENSPPYG00000001102	RNPC3	94	48.571	Pongo_abelii
ENSSMAG00000020346	rnpc3	99	79.102	ENSPNYG00000020603	rnpc3	99	79.102	Pundamilia_nyererei
ENSSMAG00000020346	rnpc3	99	57.306	ENSPNAG00000000524	rnpc3	92	55.513	Pygocentrus_nattereri
ENSSMAG00000020346	rnpc3	97	50.874	ENSRNOG00000017310	Rnpc3	95	52.600	Rattus_norvegicus
ENSSMAG00000020346	rnpc3	97	47.582	ENSRBIG00000043897	RNPC3	95	48.805	Rhinopithecus_bieti
ENSSMAG00000020346	rnpc3	97	50.775	ENSRROG00000032334	RNPC3	95	51.896	Rhinopithecus_roxellana
ENSSMAG00000020346	rnpc3	97	51.068	ENSSBOG00000024473	RNPC3	95	51.800	Saimiri_boliviensis_boliviensis
ENSSMAG00000020346	rnpc3	97	53.892	ENSSHAG00000011859	RNPC3	95	53.892	Sarcophilus_harrisii
ENSSMAG00000020346	rnpc3	97	64.542	ENSSFOG00015013055	rnpc3	99	64.343	Scleropages_formosus
ENSSMAG00000020346	rnpc3	100	88.350	ENSSDUG00000006600	rnpc3	100	88.350	Seriola_dumerili
ENSSMAG00000020346	rnpc3	100	87.961	ENSSLDG00000007979	rnpc3	100	87.961	Seriola_lalandi_dorsalis
ENSSMAG00000020346	rnpc3	95	54.930	ENSSPUG00000008539	-	93	55.070	Sphenodon_punctatus
ENSSMAG00000020346	rnpc3	97	50.690	ENSSPUG00000003872	-	92	50.493	Sphenodon_punctatus
ENSSMAG00000020346	rnpc3	100	75.340	ENSSPAG00000005633	rnpc3	100	75.534	Stegastes_partitus
ENSSMAG00000020346	rnpc3	97	51.267	ENSSSCG00000037254	RNPC3	95	52.800	Sus_scrofa
ENSSMAG00000020346	rnpc3	89	56.494	ENSTGUG00000004795	-	99	53.796	Taeniopygia_guttata
ENSSMAG00000020346	rnpc3	99	75.194	ENSTNIG00000018963	rnpc3	100	75.194	Tetraodon_nigroviridis
ENSSMAG00000020346	rnpc3	97	50.965	ENSUMAG00000007775	RNPC3	97	52.684	Ursus_maritimus
ENSSMAG00000020346	rnpc3	97	50.772	ENSVVUG00000000331	RNPC3	95	52.485	Vulpes_vulpes
ENSSMAG00000020346	rnpc3	97	45.455	ENSXETG00000025027	rnpc3	52	46.863	Xenopus_tropicalis
ENSSMAG00000020346	rnpc3	53	78.182	ENSXCOG00000005013	rnpc3	100	74.379	Xiphophorus_couchianus
ENSSMAG00000020346	rnpc3	100	76.117	ENSXMAG00000006495	rnpc3	100	76.505	Xiphophorus_maculatus