EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000020390 (Gene tree)
Gene ID: -
Gene Symbol: utp23
Alias: fc04b12|wu:fc04b12|zgc:110214
Full Name: UTP23%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3857 bases
Position: chr22:3926647-3930503
Accession: ZDB-GENE-050417-353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000033308	Fcf1	PF04900.12	8.6e-28	1	1
ENSSMAP00000033316	Fcf1	PF04900.12	9.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000033737	-	1228	-	ENSSMAP00000033316	272 (aa)	-	-
ENSSMAT00000033729	-	2926	-	ENSSMAP00000033308	256 (aa)	-	A0A2U9CXI3

Gene Model

Click here to download ENSSMAG00000020390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000020390	utp23	90	61.905	ENSG00000147679	UTP23	96	65.152	Homo_sapiens
ENSSMAG00000020390	utp23	63	75.776	ENSAPOG00000013233	UTP23	81	70.312	Acanthochromis_polyacanthus
ENSSMAG00000020390	utp23	87	78.924	ENSAPOG00000004620	utp23	100	74.409	Acanthochromis_polyacanthus
ENSSMAG00000020390	utp23	63	75.625	ENSAPOG00000004608	-	89	70.157	Acanthochromis_polyacanthus
ENSSMAG00000020390	utp23	82	65.550	ENSAMEG00000010317	UTP23	94	61.345	Ailuropoda_melanoleuca
ENSSMAG00000020390	utp23	100	81.323	ENSACIG00000013638	utp23	97	81.323	Amphilophus_citrinellus
ENSSMAG00000020390	utp23	90	80.435	ENSAOCG00000016307	utp23	98	77.108	Amphiprion_ocellaris
ENSSMAG00000020390	utp23	90	80.435	ENSAPEG00000018976	utp23	99	77.200	Amphiprion_percula
ENSSMAG00000020390	utp23	100	87.109	ENSATEG00000007509	utp23	100	87.109	Anabas_testudineus
ENSSMAG00000020390	utp23	82	65.072	ENSACAG00000011061	UTP23	96	58.197	Anolis_carolinensis
ENSSMAG00000020390	utp23	90	61.039	ENSANAG00000036252	-	91	60.084	Aotus_nancymaae
ENSSMAG00000020390	utp23	90	61.472	ENSANAG00000025273	-	94	60.504	Aotus_nancymaae
ENSSMAG00000020390	utp23	99	65.882	ENSAMXG00000020989	utp23	94	69.262	Astyanax_mexicanus
ENSSMAG00000020390	utp23	84	65.421	ENSBTAG00000040422	UTP23	94	60.924	Bos_taurus
ENSSMAG00000020390	utp23	50	30.469	WBGene00009266	F30A10.9	63	30.469	Caenorhabditis_elegans
ENSSMAG00000020390	utp23	85	38.938	WBGene00016411	C34E10.10	99	37.849	Caenorhabditis_elegans
ENSSMAG00000020390	utp23	90	61.472	ENSCJAG00000005903	UTP23	94	60.504	Callithrix_jacchus
ENSSMAG00000020390	utp23	82	66.507	ENSCAFG00000000821	UTP23	95	62.185	Canis_familiaris
ENSSMAG00000020390	utp23	82	66.507	ENSCAFG00020004174	UTP23	95	62.185	Canis_lupus_dingo
ENSSMAG00000020390	utp23	84	64.486	ENSCHIG00000019828	UTP23	94	60.084	Capra_hircus
ENSSMAG00000020390	utp23	85	65.138	ENSTSYG00000001644	UTP23	94	62.605	Carlito_syrichta
ENSSMAG00000020390	utp23	84	65.421	ENSCPOG00000034561	UTP23	90	59.756	Cavia_porcellus
ENSSMAG00000020390	utp23	82	65.072	ENSCCAG00000030228	UTP23	94	60.833	Cebus_capucinus
ENSSMAG00000020390	utp23	90	61.472	ENSCATG00000035129	UTP23	94	60.924	Cercocebus_atys
ENSSMAG00000020390	utp23	82	64.115	ENSCLAG00000005108	-	99	58.431	Chinchilla_lanigera
ENSSMAG00000020390	utp23	82	57.895	ENSCLAG00000000531	-	99	56.444	Chinchilla_lanigera
ENSSMAG00000020390	utp23	90	61.472	ENSCSAG00000010933	UTP23	94	60.924	Chlorocebus_sabaeus
ENSSMAG00000020390	utp23	82	66.029	ENSCHOG00000003145	UTP23	94	61.765	Choloepus_hoffmanni
ENSSMAG00000020390	utp23	84	66.822	ENSCPBG00000001634	UTP23	95	63.333	Chrysemys_picta_bellii
ENSSMAG00000020390	utp23	81	50.472	ENSCING00000012577	-	94	46.890	Ciona_intestinalis
ENSSMAG00000020390	utp23	81	50.000	ENSCSAVG00000003273	-	95	46.890	Ciona_savignyi
ENSSMAG00000020390	utp23	84	65.421	ENSCANG00000028461	UTP23	86	61.441	Colobus_angolensis_palliatus
ENSSMAG00000020390	utp23	86	63.801	ENSCGRG00001005218	Utp23	94	60.504	Cricetulus_griseus_chok1gshd
ENSSMAG00000020390	utp23	84	87.383	ENSCSEG00000011409	utp23	96	82.000	Cynoglossus_semilaevis
ENSSMAG00000020390	utp23	100	81.250	ENSCVAG00000003180	utp23	98	81.250	Cyprinodon_variegatus
ENSSMAG00000020390	utp23	82	77.990	ENSDARG00000105012	utp23	98	72.941	Danio_rerio
ENSSMAG00000020390	utp23	54	30.935	ENSDARG00000102333	fcf1	69	30.935	Danio_rerio
ENSSMAG00000020390	utp23	82	66.507	ENSDNOG00000033602	UTP23	94	62.185	Dasypus_novemcinctus
ENSSMAG00000020390	utp23	91	56.410	ENSDORG00000029054	-	85	55.128	Dipodomys_ordii
ENSSMAG00000020390	utp23	81	43.750	FBgn0031361	CG17652	94	43.515	Drosophila_melanogaster
ENSSMAG00000020390	utp23	97	43.775	ENSETEG00000017109	-	73	49.180	Echinops_telfairi
ENSSMAG00000020390	utp23	95	60.744	ENSETEG00000015401	-	94	61.603	Echinops_telfairi
ENSSMAG00000020390	utp23	85	53.211	ENSEBUG00000009876	utp23	99	48.413	Eptatretus_burgeri
ENSSMAG00000020390	utp23	82	64.115	ENSEASG00005023141	UTP23	94	60.504	Equus_asinus_asinus
ENSSMAG00000020390	utp23	82	63.636	ENSECAG00000026844	UTP23	94	60.084	Equus_caballus
ENSSMAG00000020390	utp23	84	65.888	ENSEEUG00000004503	UTP23	94	60.924	Erinaceus_europaeus
ENSSMAG00000020390	utp23	89	77.533	ENSELUG00000005602	utp23	99	69.141	Esox_lucius
ENSSMAG00000020390	utp23	84	65.888	ENSFCAG00000036051	UTP23	95	61.345	Felis_catus
ENSSMAG00000020390	utp23	82	60.766	ENSFALG00000002299	UTP23	96	56.198	Ficedula_albicollis
ENSSMAG00000020390	utp23	90	62.338	ENSFDAG00000021034	UTP23	93	62.288	Fukomys_damarensis
ENSSMAG00000020390	utp23	100	83.203	ENSFHEG00000008581	utp23	100	81.641	Fundulus_heteroclitus
ENSSMAG00000020390	utp23	94	72.500	ENSGMOG00000015495	utp23	97	73.820	Gadus_morhua
ENSSMAG00000020390	utp23	84	64.486	ENSGALG00000032400	UTP23	93	59.322	Gallus_gallus
ENSSMAG00000020390	utp23	96	85.081	ENSGAFG00000002063	utp23	95	85.081	Gambusia_affinis
ENSSMAG00000020390	utp23	99	77.075	ENSGACG00000002979	utp23	100	77.075	Gasterosteus_aculeatus
ENSSMAG00000020390	utp23	90	62.338	ENSGGOG00000013203	UTP23	94	61.765	Gorilla_gorilla
ENSSMAG00000020390	utp23	100	84.375	ENSHBUG00000023376	utp23	100	84.375	Haplochromis_burtoni
ENSSMAG00000020390	utp23	81	57.005	ENSHGLG00000008717	-	97	50.602	Heterocephalus_glaber_female
ENSSMAG00000020390	utp23	82	64.115	ENSHGLG00000004025	UTP23	93	61.441	Heterocephalus_glaber_female
ENSSMAG00000020390	utp23	88	60.714	ENSHGLG00000020901	-	98	54.851	Heterocephalus_glaber_female
ENSSMAG00000020390	utp23	82	64.115	ENSHGLG00100018875	UTP23	93	61.441	Heterocephalus_glaber_male
ENSSMAG00000020390	utp23	80	56.585	ENSHGLG00100012817	-	93	56.938	Heterocephalus_glaber_male
ENSSMAG00000020390	utp23	98	76.494	ENSHCOG00000007006	utp23	100	74.502	Hippocampus_comes
ENSSMAG00000020390	utp23	89	72.247	ENSIPUG00000014437	utp23	96	69.880	Ictalurus_punctatus
ENSSMAG00000020390	utp23	82	64.593	ENSSTOG00000001411	UTP23	93	62.288	Ictidomys_tridecemlineatus
ENSSMAG00000020390	utp23	90	83.913	ENSKMAG00000002262	utp23	100	80.620	Kryptolebias_marmoratus
ENSSMAG00000020390	utp23	100	78.626	ENSLBEG00000012819	utp23	100	79.389	Labrus_bergylta
ENSSMAG00000020390	utp23	92	66.383	ENSLACG00000014611	UTP23	99	61.905	Latimeria_chalumnae
ENSSMAG00000020390	utp23	100	63.281	ENSLOCG00000003289	utp23	92	68.050	Lepisosteus_oculatus
ENSSMAG00000020390	utp23	93	61.345	ENSLAFG00000001282	UTP23	94	61.765	Loxodonta_africana
ENSSMAG00000020390	utp23	90	61.905	ENSMFAG00000003374	UTP23	94	61.345	Macaca_fascicularis
ENSSMAG00000020390	utp23	90	61.905	ENSMMUG00000020284	UTP23	94	61.345	Macaca_mulatta
ENSSMAG00000020390	utp23	90	61.905	ENSMNEG00000028668	UTP23	94	61.345	Macaca_nemestrina
ENSSMAG00000020390	utp23	90	61.905	ENSMLEG00000032668	UTP23	88	61.345	Mandrillus_leucophaeus
ENSSMAG00000020390	utp23	100	86.719	ENSMAMG00000003259	utp23	100	86.719	Mastacembelus_armatus
ENSSMAG00000020390	utp23	100	83.984	ENSMZEG00005026398	utp23	100	83.984	Maylandia_zebra
ENSSMAG00000020390	utp23	84	64.953	ENSMGAG00000012472	UTP23	93	59.746	Meleagris_gallopavo
ENSSMAG00000020390	utp23	82	66.029	ENSMICG00000034720	UTP23	95	61.765	Microcebus_murinus
ENSSMAG00000020390	utp23	90	83.043	ENSMMOG00000014498	utp23	100	80.078	Mola_mola
ENSSMAG00000020390	utp23	84	61.682	ENSMODG00000004140	UTP23	91	58.475	Monodelphis_domestica
ENSSMAG00000020390	utp23	98	88.400	ENSMALG00000010867	utp23	98	88.115	Monopterus_albus
ENSSMAG00000020390	utp23	82	63.158	MGP_CAROLIEiJ_G0019781	Utp23	97	58.431	Mus_caroli
ENSSMAG00000020390	utp23	82	64.115	ENSMUSG00000022313	Utp23	94	61.345	Mus_musculus
ENSSMAG00000020390	utp23	82	63.636	MGP_SPRETEiJ_G0020678	Utp23	94	58.824	Mus_spretus
ENSSMAG00000020390	utp23	84	66.355	ENSMPUG00000000987	UTP23	94	61.765	Mustela_putorius_furo
ENSSMAG00000020390	utp23	82	64.593	ENSMLUG00000004345	UTP23	100	58.800	Myotis_lucifugus
ENSSMAG00000020390	utp23	100	84.375	ENSNBRG00000012946	utp23	100	84.375	Neolamprologus_brichardi
ENSSMAG00000020390	utp23	90	61.039	ENSNLEG00000032995	UTP23	87	60.504	Nomascus_leucogenys
ENSSMAG00000020390	utp23	84	60.748	ENSMEUG00000001566	UTP23	89	59.809	Notamacropus_eugenii
ENSSMAG00000020390	utp23	84	65.421	ENSOPRG00000011227	UTP23	94	60.084	Ochotona_princeps
ENSSMAG00000020390	utp23	92	60.593	ENSODEG00000018881	-	97	56.680	Octodon_degus
ENSSMAG00000020390	utp23	79	82.673	ENSONIG00000013525	utp23	99	82.673	Oreochromis_niloticus
ENSSMAG00000020390	utp23	88	46.875	ENSOANG00000004878	UTP23	91	45.982	Ornithorhynchus_anatinus
ENSSMAG00000020390	utp23	84	65.421	ENSOCUG00000007541	UTP23	94	60.924	Oryctolagus_cuniculus
ENSSMAG00000020390	utp23	100	82.812	ENSORLG00000001784	utp23	99	83.203	Oryzias_latipes
ENSSMAG00000020390	utp23	100	83.203	ENSORLG00020009731	utp23	99	83.594	Oryzias_latipes_hni
ENSSMAG00000020390	utp23	100	83.203	ENSORLG00015016970	utp23	99	83.594	Oryzias_latipes_hsok
ENSSMAG00000020390	utp23	99	80.392	ENSOMEG00000008767	utp23	99	81.176	Oryzias_melastigma
ENSSMAG00000020390	utp23	51	54.615	ENSOGAG00000033060	-	88	51.538	Otolemur_garnettii
ENSSMAG00000020390	utp23	82	65.072	ENSOGAG00000017024	UTP23	95	61.765	Otolemur_garnettii
ENSSMAG00000020390	utp23	84	64.486	ENSOARG00000010483	UTP23	94	60.084	Ovis_aries
ENSSMAG00000020390	utp23	84	65.888	ENSPPAG00000028660	UTP23	94	61.345	Pan_paniscus
ENSSMAG00000020390	utp23	84	65.888	ENSPPRG00000024902	UTP23	95	61.345	Panthera_pardus
ENSSMAG00000020390	utp23	84	65.888	ENSPTIG00000019925	UTP23	95	61.345	Panthera_tigris_altaica
ENSSMAG00000020390	utp23	90	61.905	ENSPTRG00000020521	UTP23	87	61.345	Pan_troglodytes
ENSSMAG00000020390	utp23	90	61.905	ENSPANG00000011559	UTP23	94	61.345	Papio_anubis
ENSSMAG00000020390	utp23	93	74.895	ENSPKIG00000018790	utp23	99	74.895	Paramormyrops_kingsleyae
ENSSMAG00000020390	utp23	84	67.290	ENSPSIG00000013132	UTP23	99	61.847	Pelodiscus_sinensis
ENSSMAG00000020390	utp23	99	75.099	ENSPMGG00000019770	utp23	99	74.308	Periophthalmus_magnuspinnatus
ENSSMAG00000020390	utp23	84	59.813	ENSPCIG00000018598	UTP23	98	54.651	Phascolarctos_cinereus
ENSSMAG00000020390	utp23	100	83.203	ENSPFOG00000003590	utp23	100	83.203	Poecilia_formosa
ENSSMAG00000020390	utp23	100	83.594	ENSPLAG00000017925	utp23	100	83.594	Poecilia_latipinna
ENSSMAG00000020390	utp23	100	83.594	ENSPMEG00000006728	utp23	100	83.594	Poecilia_mexicana
ENSSMAG00000020390	utp23	100	82.031	ENSPREG00000002478	utp23	100	82.422	Poecilia_reticulata
ENSSMAG00000020390	utp23	84	65.888	ENSPPYG00000018831	UTP23	92	61.864	Pongo_abelii
ENSSMAG00000020390	utp23	82	64.115	ENSPCAG00000009093	UTP23	94	60.669	Procavia_capensis
ENSSMAG00000020390	utp23	82	65.072	ENSPVAG00000002661	UTP23	100	59.600	Pteropus_vampyrus
ENSSMAG00000020390	utp23	100	83.203	ENSPNYG00000017636	utp23	100	83.203	Pundamilia_nyererei
ENSSMAG00000020390	utp23	79	74.384	ENSPNAG00000024538	utp23	98	71.369	Pygocentrus_nattereri
ENSSMAG00000020390	utp23	82	63.636	ENSRNOG00000004387	Utp23	98	58.039	Rattus_norvegicus
ENSSMAG00000020390	utp23	90	61.905	ENSRBIG00000026267	UTP23	94	60.924	Rhinopithecus_bieti
ENSSMAG00000020390	utp23	90	61.905	ENSRROG00000028593	UTP23	94	60.924	Rhinopithecus_roxellana
ENSSMAG00000020390	utp23	82	65.072	ENSSBOG00000018914	UTP23	92	61.441	Saimiri_boliviensis_boliviensis
ENSSMAG00000020390	utp23	60	57.516	ENSSHAG00000015399	UTP23	75	56.081	Sarcophilus_harrisii
ENSSMAG00000020390	utp23	89	77.093	ENSSFOG00015009226	utp23	98	77.093	Scleropages_formosus
ENSSMAG00000020390	utp23	95	88.066	ENSSDUG00000020272	utp23	100	87.654	Seriola_dumerili
ENSSMAG00000020390	utp23	95	88.066	ENSSLDG00000000393	utp23	100	87.654	Seriola_lalandi_dorsalis
ENSSMAG00000020390	utp23	86	66.364	ENSSPUG00000011572	UTP23	99	59.524	Sphenodon_punctatus
ENSSMAG00000020390	utp23	96	78.543	ENSSPAG00000013890	utp23	99	78.543	Stegastes_partitus
ENSSMAG00000020390	utp23	87	64.865	ENSSSCG00000030493	UTP23	93	63.025	Sus_scrofa
ENSSMAG00000020390	utp23	82	60.287	ENSTGUG00000012316	-	96	55.785	Taeniopygia_guttata
ENSSMAG00000020390	utp23	82	59.330	ENSTGUG00000015403	-	100	55.508	Taeniopygia_guttata
ENSSMAG00000020390	utp23	93	78.838	ENSTRUG00000023365	utp23	98	75.686	Takifugu_rubripes
ENSSMAG00000020390	utp23	80	63.902	ENSTBEG00000008655	UTP23	75	65.405	Tupaia_belangeri
ENSSMAG00000020390	utp23	84	64.953	ENSTTRG00000015295	UTP23	94	60.924	Tursiops_truncatus
ENSSMAG00000020390	utp23	82	65.072	ENSUMAG00000020439	UTP23	94	61.345	Ursus_maritimus
ENSSMAG00000020390	utp23	84	64.953	ENSVPAG00000009358	UTP23	94	60.504	Vicugna_pacos
ENSSMAG00000020390	utp23	82	66.507	ENSVVUG00000015307	UTP23	95	62.185	Vulpes_vulpes
ENSSMAG00000020390	utp23	82	62.679	ENSXETG00000020781	utp23	96	55.649	Xenopus_tropicalis
ENSSMAG00000020390	utp23	100	83.203	ENSXCOG00000019504	utp23	100	83.594	Xiphophorus_couchianus
ENSSMAG00000020390	utp23	100	82.812	ENSXMAG00000014058	utp23	100	83.203	Xiphophorus_maculatus