EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000020534 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
5016 bases
Position
chr17:10026719-10031734
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000033567CPSF73-100_CPF11718.82.1e-4211
ENSSMAP00000033567Beta-CaspPF10996.88.7e-3411
ENSSMAP00000033567Lactamase_BPF00753.271.5e-1811
ENSSMAP00000033567RMMBLPF07521.125.6e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000033993CPSF3-2012010-ENSSMAP00000033567669 (aa)--
Gene Model
Click here to download ENSSMAG00000020534's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020534's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000020534CPSF38634.642ENSSMAG00000019579ints119534.642
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000020534CPSF39587.654ENSG00000119203CPSF3100100.000Homo_sapiens
ENSSMAG00000020534CPSF37797.868ENSAPOG00000012241CPSF39297.868Acanthochromis_polyacanthus
ENSSMAG00000020534CPSF39788.128ENSAPOG00000022087cpsf39688.128Acanthochromis_polyacanthus
ENSSMAG00000020534CPSF39587.963ENSAMEG00000008493CPSF39587.963Ailuropoda_melanoleuca
ENSSMAG00000020534CPSF38786.242ENSACIG00000009846cpsf39579.756Amphilophus_citrinellus
ENSSMAG00000020534CPSF39492.308ENSACIG00000023663CPSF39585.562Amphilophus_citrinellus
ENSSMAG00000020534CPSF39794.377ENSAOCG00000010077CPSF39594.377Amphiprion_ocellaris
ENSSMAG00000020534CPSF39787.976ENSAOCG00000022056cpsf39790.600Amphiprion_ocellaris
ENSSMAG00000020534CPSF39788.128ENSAPEG00000019526cpsf39987.879Amphiprion_percula
ENSSMAG00000020534CPSF39794.537ENSAPEG00000021167CPSF39894.537Amphiprion_percula
ENSSMAG00000020534CPSF39790.881ENSATEG00000014525CPSF39590.881Anabas_testudineus
ENSSMAG00000020534CPSF39788.584ENSATEG00000003959cpsf39688.584Anabas_testudineus
ENSSMAG00000020534CPSF39486.854ENSAPLG00000006941CPSF39486.854Anas_platyrhynchos
ENSSMAG00000020534CPSF38885.406ENSACAG00000001759CPSF39585.406Anolis_carolinensis
ENSSMAG00000020534CPSF39681.846ENSANAG00000031254CPSF39581.846Aotus_nancymaae
ENSSMAG00000020534CPSF39784.795ENSACLG00000014484cpsf39588.644Astatotilapia_calliptera
ENSSMAG00000020534CPSF39491.973ENSACLG00000018846CPSF39585.106Astatotilapia_calliptera
ENSSMAG00000020534CPSF39788.654ENSAMXG00000004786cpsf39588.654Astyanax_mexicanus
ENSSMAG00000020534CPSF39587.963ENSBTAG00000019735CPSF39587.963Bos_taurus
ENSSMAG00000020534CPSF38859.339WBGene00013460cpsf-38559.339Caenorhabditis_elegans
ENSSMAG00000020534CPSF39587.500ENSCJAG00000006276CPSF39587.500Callithrix_jacchus
ENSSMAG00000020534CPSF39687.692ENSCAFG00000003375CPSF39187.692Canis_familiaris
ENSSMAG00000020534CPSF38992.749ENSCAFG00020026799CPSF39692.749Canis_lupus_dingo
ENSSMAG00000020534CPSF39587.963ENSCHIG00000013973CPSF39587.963Capra_hircus
ENSSMAG00000020534CPSF39587.654ENSTSYG00000002967CPSF39587.654Carlito_syrichta
ENSSMAG00000020534CPSF39387.697ENSCAPG00000013851CPSF39587.697Cavia_aperea
ENSSMAG00000020534CPSF39587.519ENSCPOG00000011299CPSF39587.519Cavia_porcellus
ENSSMAG00000020534CPSF39587.500ENSCCAG00000036730CPSF39587.500Cebus_capucinus
ENSSMAG00000020534CPSF39686.449ENSCATG00000014770CPSF39992.919Cercocebus_atys
ENSSMAG00000020534CPSF39587.519ENSCLAG00000002727CPSF39587.519Chinchilla_lanigera
ENSSMAG00000020534CPSF39579.321ENSCSAG00000007125CPSF39479.321Chlorocebus_sabaeus
ENSSMAG00000020534CPSF375100.000ENSCHOG00000000180CPSF37268.880Choloepus_hoffmanni
ENSSMAG00000020534CPSF39786.474ENSCPBG00000014074CPSF39586.474Chrysemys_picta_bellii
ENSSMAG00000020534CPSF39568.913ENSCING00000007214-9468.913Ciona_intestinalis
ENSSMAG00000020534CPSF39579.380ENSCANG00000034435CPSF39479.380Colobus_angolensis_palliatus
ENSSMAG00000020534CPSF39587.365ENSCGRG00001013134Cpsf39587.365Cricetulus_griseus_chok1gshd
ENSSMAG00000020534CPSF39587.365ENSCGRG00000018319Cpsf39587.365Cricetulus_griseus_crigri
ENSSMAG00000020534CPSF39793.151ENSCSEG00000002021CPSF39989.465Cynoglossus_semilaevis
ENSSMAG00000020534CPSF39793.607ENSCVAG00000015067CPSF39593.607Cyprinodon_variegatus
ENSSMAG00000020534CPSF39789.650ENSDARG00000027649cpsf39589.650Danio_rerio
ENSSMAG00000020534CPSF39586.615ENSDNOG00000008940CPSF39186.615Dasypus_novemcinctus
ENSSMAG00000020534CPSF39587.500ENSDORG00000014263Cpsf39987.500Dipodomys_ordii
ENSSMAG00000020534CPSF39667.226FBgn0261065Cpsf739567.226Drosophila_melanogaster
ENSSMAG00000020534CPSF39575.309ENSETEG00000003893CPSF39975.309Echinops_telfairi
ENSSMAG00000020534CPSF39779.483ENSEBUG00000009018cpsf39379.483Eptatretus_burgeri
ENSSMAG00000020534CPSF39587.963ENSEASG00005003970CPSF39587.963Equus_asinus_asinus
ENSSMAG00000020534CPSF39587.963ENSECAG00000019911CPSF39792.282Equus_caballus
ENSSMAG00000020534CPSF39571.914ENSEEUG00000015422CPSF39571.914Erinaceus_europaeus
ENSSMAG00000020534CPSF39790.411ENSELUG00000013775cpsf39590.411Esox_lucius
ENSSMAG00000020534CPSF39587.963ENSFCAG00000007852CPSF39587.963Felis_catus
ENSSMAG00000020534CPSF39086.808ENSFALG00000006572CPSF39586.808Ficedula_albicollis
ENSSMAG00000020534CPSF39586.903ENSFDAG00000006317CPSF39486.903Fukomys_damarensis
ENSSMAG00000020534CPSF35475.332ENSFHEG00000012186CPSF39175.332Fundulus_heteroclitus
ENSSMAG00000020534CPSF39787.386ENSFHEG00000014774cpsf39687.386Fundulus_heteroclitus
ENSSMAG00000020534CPSF39789.041ENSGMOG00000003157cpsf39589.041Gadus_morhua
ENSSMAG00000020534CPSF39786.454ENSGALG00000016424CPSF39586.454Gallus_gallus
ENSSMAG00000020534CPSF39793.455ENSGAFG00000008016CPSF39593.455Gambusia_affinis
ENSSMAG00000020534CPSF38786.509ENSGAFG00000019449cpsf39579.817Gambusia_affinis
ENSSMAG00000020534CPSF36481.881ENSGAGG00000025583CPSF38781.881Gopherus_agassizii
ENSSMAG00000020534CPSF39685.113ENSGGOG00000001757CPSF39197.639Gorilla_gorilla
ENSSMAG00000020534CPSF39788.146ENSHBUG00000001188cpsf39688.146Haplochromis_burtoni
ENSSMAG00000020534CPSF35492.162ENSHBUG00000014332CPSF39292.162Haplochromis_burtoni
ENSSMAG00000020534CPSF39587.057ENSHGLG00000000666CPSF39487.057Heterocephalus_glaber_female
ENSSMAG00000020534CPSF39587.057ENSHGLG00100007765CPSF39487.057Heterocephalus_glaber_male
ENSSMAG00000020534CPSF39787.823ENSHCOG00000007251cpsf39687.823Hippocampus_comes
ENSSMAG00000020534CPSF39792.237ENSHCOG00000015957CPSF39492.237Hippocampus_comes
ENSSMAG00000020534CPSF39788.571ENSIPUG00000023488cpsf39588.537Ictalurus_punctatus
ENSSMAG00000020534CPSF39587.963ENSSTOG00000004476CPSF39587.963Ictidomys_tridecemlineatus
ENSSMAG00000020534CPSF39587.057ENSJJAG00000023415Cpsf39587.057Jaculus_jaculus
ENSSMAG00000020534CPSF39787.367ENSKMAG00000002806cpsf39687.367Kryptolebias_marmoratus
ENSSMAG00000020534CPSF39793.455ENSKMAG00000007317CPSF39593.455Kryptolebias_marmoratus
ENSSMAG00000020534CPSF39089.037ENSLBEG00000020569cpsf38889.037Labrus_bergylta
ENSSMAG00000020534CPSF39794.689ENSLBEG00000013492CPSF39994.689Labrus_bergylta
ENSSMAG00000020534CPSF35482.609ENSLBEG00000015018-9982.609Labrus_bergylta
ENSSMAG00000020534CPSF39781.003ENSLACG00000008308CPSF39581.003Latimeria_chalumnae
ENSSMAG00000020534CPSF39788.636ENSLOCG00000016823cpsf39588.636Lepisosteus_oculatus
ENSSMAG00000020534CPSF39586.553ENSLAFG00000009467CPSF39586.553Loxodonta_africana
ENSSMAG00000020534CPSF39587.500ENSMFAG00000001339CPSF39494.802Macaca_fascicularis
ENSSMAG00000020534CPSF38992.580ENSMMUG00000018038CPSF39294.802Macaca_mulatta
ENSSMAG00000020534CPSF38697.600ENSMNEG00000039447CPSF39497.600Macaca_nemestrina
ENSSMAG00000020534CPSF39587.654ENSMLEG00000026825CPSF39297.430Mandrillus_leucophaeus
ENSSMAG00000020534CPSF39787.215ENSMAMG00000003076cpsf39687.215Mastacembelus_armatus
ENSSMAG00000020534CPSF39493.423ENSMAMG00000008835CPSF39586.677Mastacembelus_armatus
ENSSMAG00000020534CPSF39793.485ENSMZEG00005006258CPSF39593.485Maylandia_zebra
ENSSMAG00000020534CPSF39788.146ENSMZEG00005014358cpsf39688.146Maylandia_zebra
ENSSMAG00000020534CPSF39386.929ENSMGAG00000013995CPSF39586.929Meleagris_gallopavo
ENSSMAG00000020534CPSF35077.035ENSMAUG00000000166Cpsf39177.035Mesocricetus_auratus
ENSSMAG00000020534CPSF39582.689ENSMICG00000002363CPSF39582.689Microcebus_murinus
ENSSMAG00000020534CPSF38992.411ENSMOCG00000020067Cpsf39192.411Microtus_ochrogaster
ENSSMAG00000020534CPSF39086.235ENSMMOG00000018212CPSF39486.235Mola_mola
ENSSMAG00000020534CPSF37972.321ENSMMOG00000011923CPSF38578.929Mola_mola
ENSSMAG00000020534CPSF39586.718ENSMODG00000014703CPSF39586.718Monodelphis_domestica
ENSSMAG00000020534CPSF38691.737ENSMALG00000011474CPSF39691.737Monopterus_albus
ENSSMAG00000020534CPSF39788.432ENSMALG00000016416cpsf39688.432Monopterus_albus
ENSSMAG00000020534CPSF39587.346MGP_CAROLIEiJ_G0017640Cpsf39587.346Mus_caroli
ENSSMAG00000020534CPSF39587.346ENSMUSG00000054309Cpsf39698.305Mus_musculus
ENSSMAG00000020534CPSF39587.191MGP_PahariEiJ_G0029397Cpsf39587.191Mus_pahari
ENSSMAG00000020534CPSF39587.346MGP_SPRETEiJ_G0018481Cpsf39587.346Mus_spretus
ENSSMAG00000020534CPSF39587.963ENSMPUG00000013213CPSF39587.963Mustela_putorius_furo
ENSSMAG00000020534CPSF39587.827ENSMLUG00000010636CPSF39587.827Myotis_lucifugus
ENSSMAG00000020534CPSF39587.211ENSNGAG00000019836Cpsf39587.211Nannospalax_galili
ENSSMAG00000020534CPSF39787.538ENSNBRG00000004770cpsf39687.538Neolamprologus_brichardi
ENSSMAG00000020534CPSF39491.973ENSNBRG00000010525CPSF39585.106Neolamprologus_brichardi
ENSSMAG00000020534CPSF39587.500ENSNLEG00000013359CPSF39197.639Nomascus_leucogenys
ENSSMAG00000020534CPSF38960.540ENSMEUG00000013117-8760.540Notamacropus_eugenii
ENSSMAG00000020534CPSF39578.858ENSOPRG00000008902CPSF39578.858Ochotona_princeps
ENSSMAG00000020534CPSF39587.519ENSODEG00000003129CPSF39587.519Octodon_degus
ENSSMAG00000020534CPSF39788.584ENSONIG00000018812cpsf39688.584Oreochromis_niloticus
ENSSMAG00000020534CPSF37885.311ENSOANG00000008577CPSF39485.311Ornithorhynchus_anatinus
ENSSMAG00000020534CPSF39587.809ENSOCUG00000003728CPSF39587.809Oryctolagus_cuniculus
ENSSMAG00000020534CPSF39787.082ENSORLG00000018854cpsf39687.082Oryzias_latipes
ENSSMAG00000020534CPSF39786.930ENSORLG00020013331cpsf39686.930Oryzias_latipes_hni
ENSSMAG00000020534CPSF39787.082ENSORLG00015011017cpsf39687.082Oryzias_latipes_hsok
ENSSMAG00000020534CPSF39786.970ENSOMEG00000010647cpsf39286.970Oryzias_melastigma
ENSSMAG00000020534CPSF39676.769ENSOGAG00000001680CPSF39576.769Otolemur_garnettii
ENSSMAG00000020534CPSF39587.963ENSOARG00000015073CPSF39587.963Ovis_aries
ENSSMAG00000020534CPSF39587.654ENSPPAG00000042457CPSF39197.639Pan_paniscus
ENSSMAG00000020534CPSF39587.963ENSPPRG00000016790CPSF39587.963Panthera_pardus
ENSSMAG00000020534CPSF39588.099ENSPTIG00000003920CPSF39588.099Panthera_tigris_altaica
ENSSMAG00000020534CPSF39587.654ENSPTRG00000011638CPSF39197.639Pan_troglodytes
ENSSMAG00000020534CPSF39587.500ENSPANG00000016798CPSF39494.802Papio_anubis
ENSSMAG00000020534CPSF39790.411ENSPKIG00000023646cpsf39590.538Paramormyrops_kingsleyae
ENSSMAG00000020534CPSF39586.111ENSPSIG00000016144CPSF39586.111Pelodiscus_sinensis
ENSSMAG00000020534CPSF38191.497ENSPMGG00000006141-9483.555Periophthalmus_magnuspinnatus
ENSSMAG00000020534CPSF35488.859ENSPMGG00000015311CPSF39288.859Periophthalmus_magnuspinnatus
ENSSMAG00000020534CPSF39587.654ENSPEMG00000017668Cpsf39587.654Peromyscus_maniculatus_bairdii
ENSSMAG00000020534CPSF38189.174ENSPMAG00000004841cpsf310089.174Petromyzon_marinus
ENSSMAG00000020534CPSF39387.697ENSPCIG00000009823CPSF39587.697Phascolarctos_cinereus
ENSSMAG00000020534CPSF39787.500ENSPFOG00000015922cpsf39687.500Poecilia_formosa
ENSSMAG00000020534CPSF39793.151ENSPFOG00000010418-9593.151Poecilia_formosa
ENSSMAG00000020534CPSF35489.785ENSPLAG00000021300-9289.785Poecilia_latipinna
ENSSMAG00000020534CPSF39787.500ENSPLAG00000000882cpsf39687.500Poecilia_latipinna
ENSSMAG00000020534CPSF39787.652ENSPMEG00000018309cpsf39687.652Poecilia_mexicana
ENSSMAG00000020534CPSF38786.464ENSPREG00000014875cpsf39579.755Poecilia_reticulata
ENSSMAG00000020534CPSF39787.172ENSPREG00000004482CPSF39587.172Poecilia_reticulata
ENSSMAG00000020534CPSF39682.923ENSPPYG00000012666CPSF39582.923Pongo_abelii
ENSSMAG00000020534CPSF37965.537ENSPCAG00000015042CPSF38165.537Procavia_capensis
ENSSMAG00000020534CPSF38389.964ENSPCOG00000023016CPSF39189.964Propithecus_coquereli
ENSSMAG00000020534CPSF39687.538ENSPVAG00000005324CPSF39587.538Pteropus_vampyrus
ENSSMAG00000020534CPSF39788.146ENSPNYG00000004405cpsf39688.146Pundamilia_nyererei
ENSSMAG00000020534CPSF38896.330ENSPNYG00000021047CPSF39288.430Pundamilia_nyererei
ENSSMAG00000020534CPSF39788.906ENSPNAG00000023060cpsf39588.906Pygocentrus_nattereri
ENSSMAG00000020534CPSF39587.346ENSRNOG00000052418Cpsf39587.346Rattus_norvegicus
ENSSMAG00000020534CPSF39582.280ENSRBIG00000041615CPSF39483.550Rhinopithecus_bieti
ENSSMAG00000020534CPSF39587.654ENSRROG00000033792CPSF39587.654Rhinopithecus_roxellana
ENSSMAG00000020534CPSF38743.008YLR277CYSH18543.008Saccharomyces_cerevisiae
ENSSMAG00000020534CPSF39383.856ENSSBOG00000027263CPSF39283.856Saimiri_boliviensis_boliviensis
ENSSMAG00000020534CPSF39587.654ENSSHAG00000007024CPSF39587.654Sarcophilus_harrisii
ENSSMAG00000020534CPSF39790.259ENSSFOG00015002108cpsf39590.259Scleropages_formosus
ENSSMAG00000020534CPSF39788.432ENSSDUG00000002828cpsf39388.432Seriola_dumerili
ENSSMAG00000020534CPSF39794.697ENSSDUG00000018498CPSF39594.697Seriola_dumerili
ENSSMAG00000020534CPSF39788.432ENSSLDG00000008469cpsf39392.333Seriola_lalandi_dorsalis
ENSSMAG00000020534CPSF39794.697ENSSLDG00000005234CPSF39594.697Seriola_lalandi_dorsalis
ENSSMAG00000020534CPSF38083.647ENSSARG00000005186CPSF37883.647Sorex_araneus
ENSSMAG00000020534CPSF39384.639ENSSPUG00000015525CPSF39384.639Sphenodon_punctatus
ENSSMAG00000020534CPSF39788.280ENSSPAG00000018579cpsf39688.280Stegastes_partitus
ENSSMAG00000020534CPSF39794.064ENSSPAG00000002906CPSF39594.064Stegastes_partitus
ENSSMAG00000020534CPSF39587.963ENSSSCG00000020799CPSF39587.963Sus_scrofa
ENSSMAG00000020534CPSF39686.943ENSTGUG00000013016CPSF39586.943Taeniopygia_guttata
ENSSMAG00000020534CPSF35478.788ENSTRUG00000013905CPSF39178.788Takifugu_rubripes
ENSSMAG00000020534CPSF39787.976ENSTRUG00000007030cpsf39487.976Takifugu_rubripes
ENSSMAG00000020534CPSF37091.713ENSTBEG00000002707CPSF37191.713Tupaia_belangeri
ENSSMAG00000020534CPSF38374.696ENSTTRG00000000861CPSF38274.696Tursiops_truncatus
ENSSMAG00000020534CPSF39687.692ENSUAMG00000007535CPSF39387.692Ursus_americanus
ENSSMAG00000020534CPSF39087.622ENSUMAG00000003676CPSF39492.665Ursus_maritimus
ENSSMAG00000020534CPSF39387.697ENSVPAG00000008041CPSF310087.697Vicugna_pacos
ENSSMAG00000020534CPSF39587.963ENSVVUG00000002194CPSF39587.963Vulpes_vulpes
ENSSMAG00000020534CPSF39784.954ENSXETG00000008263cpsf39584.954Xenopus_tropicalis
ENSSMAG00000020534CPSF39788.073ENSXCOG00000019695cpsf39688.073Xiphophorus_couchianus
ENSSMAG00000020534CPSF39787.671ENSXMAG00000009784cpsf39687.671Xiphophorus_maculatus
ENSSMAG00000020534CPSF39793.455ENSXMAG00000027291CPSF39593.455Xiphophorus_maculatus

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