EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000020820 (Gene tree)
Gene ID: -
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine (psi) synthase family member 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2276 bases
Position: chr6:12034421-12036696
Accession: ZDB-GENE-040704-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000034047	TruB_N	PF01509.18	7.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000034477	-	990	-	ENSSMAP00000034047	329 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000020820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000020820	trub2	60	30.808	ENSSMAG00000001020	trub1	69	30.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000020820	trub2	97	52.648	ENSG00000167112	TRUB2	97	52.648	Homo_sapiens
ENSSMAG00000020820	trub2	78	80.952	ENSAPOG00000018284	-	94	80.952	Acanthochromis_polyacanthus
ENSSMAG00000020820	trub2	66	81.193	ENSAPOG00000015733	trub2	79	81.193	Acanthochromis_polyacanthus
ENSSMAG00000020820	trub2	86	57.447	ENSAMEG00000015395	TRUB2	85	57.447	Ailuropoda_melanoleuca
ENSSMAG00000020820	trub2	88	78.694	ENSACIG00000016500	trub2	98	73.231	Amphilophus_citrinellus
ENSSMAG00000020820	trub2	99	76.000	ENSAOCG00000002330	trub2	95	76.000	Amphiprion_ocellaris
ENSSMAG00000020820	trub2	99	76.000	ENSAPEG00000013177	trub2	95	76.000	Amphiprion_percula
ENSSMAG00000020820	trub2	88	80.277	ENSATEG00000011371	trub2	91	80.277	Anabas_testudineus
ENSSMAG00000020820	trub2	89	50.340	ENSAPLG00000009254	TRUB2	96	50.847	Anas_platyrhynchos
ENSSMAG00000020820	trub2	85	55.124	ENSACAG00000007331	TRUB2	85	55.124	Anolis_carolinensis
ENSSMAG00000020820	trub2	84	59.353	ENSANAG00000036234	TRUB2	89	59.353	Aotus_nancymaae
ENSSMAG00000020820	trub2	100	71.515	ENSACLG00000010793	trub2	100	71.515	Astatotilapia_calliptera
ENSSMAG00000020820	trub2	99	56.135	ENSAMXG00000031679	trub2	93	56.135	Astyanax_mexicanus
ENSSMAG00000020820	trub2	95	53.822	ENSCJAG00000020009	TRUB2	95	53.822	Callithrix_jacchus
ENSSMAG00000020820	trub2	96	52.500	ENSCAFG00000020068	TRUB2	96	52.500	Canis_familiaris
ENSSMAG00000020820	trub2	52	57.803	ENSCAFG00020017325	-	96	57.803	Canis_lupus_dingo
ENSSMAG00000020820	trub2	84	55.755	ENSCHIG00000021160	TRUB2	84	55.755	Capra_hircus
ENSSMAG00000020820	trub2	84	58.273	ENSTSYG00000034163	TRUB2	84	58.273	Carlito_syrichta
ENSSMAG00000020820	trub2	75	56.048	ENSCAPG00000000223	TRUB2	90	52.817	Cavia_aperea
ENSSMAG00000020820	trub2	88	55.556	ENSCPOG00000013535	TRUB2	92	52.747	Cavia_porcellus
ENSSMAG00000020820	trub2	98	49.691	ENSCCAG00000028463	-	96	49.691	Cebus_capucinus
ENSSMAG00000020820	trub2	84	58.273	ENSCCAG00000026531	-	85	58.273	Cebus_capucinus
ENSSMAG00000020820	trub2	97	53.271	ENSCATG00000038234	TRUB2	97	53.271	Cercocebus_atys
ENSSMAG00000020820	trub2	84	57.554	ENSCLAG00000001702	TRUB2	88	56.395	Chinchilla_lanigera
ENSSMAG00000020820	trub2	95	51.104	ENSCSAG00000014117	TRUB2	95	51.104	Chlorocebus_sabaeus
ENSSMAG00000020820	trub2	84	56.071	ENSCHOG00000001555	TRUB2	84	56.071	Choloepus_hoffmanni
ENSSMAG00000020820	trub2	84	57.554	ENSCPBG00000025186	TRUB2	81	57.554	Chrysemys_picta_bellii
ENSSMAG00000020820	trub2	81	36.029	ENSCSAVG00000003930	-	83	36.029	Ciona_savignyi
ENSSMAG00000020820	trub2	97	47.352	ENSCANG00000016135	TRUB2	96	47.352	Colobus_angolensis_palliatus
ENSSMAG00000020820	trub2	96	51.411	ENSCGRG00001024441	Trub2	96	51.411	Cricetulus_griseus_chok1gshd
ENSSMAG00000020820	trub2	96	51.411	ENSCGRG00000005633	Trub2	96	51.411	Cricetulus_griseus_crigri
ENSSMAG00000020820	trub2	97	67.812	ENSCSEG00000001331	trub2	95	67.812	Cynoglossus_semilaevis
ENSSMAG00000020820	trub2	99	70.769	ENSCVAG00000009901	trub2	97	70.769	Cyprinodon_variegatus
ENSSMAG00000020820	trub2	94	59.164	ENSDARG00000028379	trub2	88	59.164	Danio_rerio
ENSSMAG00000020820	trub2	84	56.318	ENSDNOG00000045679	-	83	56.318	Dasypus_novemcinctus
ENSSMAG00000020820	trub2	80	38.351	ENSDNOG00000043967	-	84	38.351	Dasypus_novemcinctus
ENSSMAG00000020820	trub2	84	57.554	ENSDORG00000016222	Trub2	87	57.554	Dipodomys_ordii
ENSSMAG00000020820	trub2	87	33.564	FBgn0033060	CG7849	90	33.564	Drosophila_melanogaster
ENSSMAG00000020820	trub2	84	57.194	ENSETEG00000009114	TRUB2	86	57.194	Echinops_telfairi
ENSSMAG00000020820	trub2	67	46.875	ENSEBUG00000015723	trub2	81	46.875	Eptatretus_burgeri
ENSSMAG00000020820	trub2	95	53.822	ENSEASG00005016819	TRUB2	95	53.822	Equus_asinus_asinus
ENSSMAG00000020820	trub2	95	54.140	ENSECAG00000023520	TRUB2	95	54.140	Equus_caballus
ENSSMAG00000020820	trub2	84	57.194	ENSEEUG00000008908	TRUB2	84	57.194	Erinaceus_europaeus
ENSSMAG00000020820	trub2	91	64.952	ENSELUG00000002376	trub2	97	64.952	Esox_lucius
ENSSMAG00000020820	trub2	84	58.633	ENSFCAG00000005839	TRUB2	86	58.633	Felis_catus
ENSSMAG00000020820	trub2	76	54.000	ENSFALG00000001364	TRUB2	80	54.941	Ficedula_albicollis
ENSSMAG00000020820	trub2	84	57.857	ENSFDAG00000021374	TRUB2	88	55.747	Fukomys_damarensis
ENSSMAG00000020820	trub2	100	65.350	ENSFHEG00000014655	trub2	95	65.350	Fundulus_heteroclitus
ENSSMAG00000020820	trub2	91	61.409	ENSGMOG00000000981	trub2	100	61.409	Gadus_morhua
ENSSMAG00000020820	trub2	83	54.380	ENSGALG00000004920	TRUB2	67	54.380	Gallus_gallus
ENSSMAG00000020820	trub2	98	67.372	ENSGAFG00000010107	trub2	91	72.222	Gambusia_affinis
ENSSMAG00000020820	trub2	91	80.872	ENSGACG00000001476	trub2	90	80.872	Gasterosteus_aculeatus
ENSSMAG00000020820	trub2	88	56.207	ENSGAGG00000022872	TRUB2	85	56.207	Gopherus_agassizii
ENSSMAG00000020820	trub2	97	52.648	ENSGGOG00000014780	TRUB2	97	52.648	Gorilla_gorilla
ENSSMAG00000020820	trub2	100	72.121	ENSHBUG00000022384	trub2	100	72.121	Haplochromis_burtoni
ENSSMAG00000020820	trub2	84	56.475	ENSHGLG00000016715	TRUB2	84	56.475	Heterocephalus_glaber_female
ENSSMAG00000020820	trub2	84	56.475	ENSHGLG00100016548	TRUB2	84	56.475	Heterocephalus_glaber_male
ENSSMAG00000020820	trub2	99	72.086	ENSHCOG00000017748	trub2	99	72.086	Hippocampus_comes
ENSSMAG00000020820	trub2	98	58.567	ENSIPUG00000017725	hdhd3	53	58.567	Ictalurus_punctatus
ENSSMAG00000020820	trub2	84	57.194	ENSSTOG00000008024	-	88	54.598	Ictidomys_tridecemlineatus
ENSSMAG00000020820	trub2	84	56.835	ENSSTOG00000022617	-	84	56.835	Ictidomys_tridecemlineatus
ENSSMAG00000020820	trub2	84	50.719	ENSJJAG00000019181	Trub2	82	50.719	Jaculus_jaculus
ENSSMAG00000020820	trub2	99	72.340	ENSKMAG00000007861	trub2	98	72.340	Kryptolebias_marmoratus
ENSSMAG00000020820	trub2	98	71.988	ENSLBEG00000000907	trub2	98	71.988	Labrus_bergylta
ENSSMAG00000020820	trub2	99	50.920	ENSLACG00000001515	TRUB2	96	50.920	Latimeria_chalumnae
ENSSMAG00000020820	trub2	88	60.900	ENSLOCG00000000885	trub2	95	60.900	Lepisosteus_oculatus
ENSSMAG00000020820	trub2	84	57.194	ENSLAFG00000002174	TRUB2	91	57.194	Loxodonta_africana
ENSSMAG00000020820	trub2	95	53.481	ENSMFAG00000000881	TRUB2	95	53.481	Macaca_fascicularis
ENSSMAG00000020820	trub2	84	58.273	ENSMMUG00000014146	TRUB2	84	58.273	Macaca_mulatta
ENSSMAG00000020820	trub2	95	53.481	ENSMNEG00000011189	TRUB2	95	53.481	Macaca_nemestrina
ENSSMAG00000020820	trub2	95	53.481	ENSMLEG00000037270	TRUB2	95	53.481	Mandrillus_leucophaeus
ENSSMAG00000020820	trub2	90	78.983	ENSMAMG00000023643	trub2	98	78.983	Mastacembelus_armatus
ENSSMAG00000020820	trub2	100	71.818	ENSMZEG00005016018	trub2	100	71.818	Maylandia_zebra
ENSSMAG00000020820	trub2	56	57.377	ENSMGAG00000003894	TRUB2	92	57.377	Meleagris_gallopavo
ENSSMAG00000020820	trub2	84	56.835	ENSMAUG00000010403	Trub2	88	54.651	Mesocricetus_auratus
ENSSMAG00000020820	trub2	84	57.914	ENSMICG00000047032	TRUB2	84	57.914	Microcebus_murinus
ENSSMAG00000020820	trub2	84	56.115	ENSMOCG00000014291	Trub2	91	56.115	Microtus_ochrogaster
ENSSMAG00000020820	trub2	91	78.859	ENSMMOG00000021674	trub2	92	78.859	Mola_mola
ENSSMAG00000020820	trub2	85	54.804	ENSMODG00000005940	TRUB2	95	54.804	Monodelphis_domestica
ENSSMAG00000020820	trub2	99	75.915	ENSMALG00000021231	trub2	97	75.915	Monopterus_albus
ENSSMAG00000020820	trub2	95	50.949	MGP_CAROLIEiJ_G0023368	Trub2	95	50.949	Mus_caroli
ENSSMAG00000020820	trub2	95	50.633	ENSMUSG00000039826	Trub2	95	50.633	Mus_musculus
ENSSMAG00000020820	trub2	95	51.582	MGP_PahariEiJ_G0024826	Trub2	95	51.582	Mus_pahari
ENSSMAG00000020820	trub2	95	50.949	MGP_SPRETEiJ_G0024286	Trub2	95	50.949	Mus_spretus
ENSSMAG00000020820	trub2	86	56.738	ENSMPUG00000013206	TRUB2	77	56.738	Mustela_putorius_furo
ENSSMAG00000020820	trub2	84	57.914	ENSMLUG00000005256	TRUB2	83	57.914	Myotis_lucifugus
ENSSMAG00000020820	trub2	96	49.843	ENSNGAG00000018679	Trub2	96	49.843	Nannospalax_galili
ENSSMAG00000020820	trub2	100	72.121	ENSNBRG00000016294	trub2	100	72.121	Neolamprologus_brichardi
ENSSMAG00000020820	trub2	97	52.336	ENSNLEG00000017556	TRUB2	97	52.336	Nomascus_leucogenys
ENSSMAG00000020820	trub2	84	57.194	ENSMEUG00000000484	TRUB2	89	57.194	Notamacropus_eugenii
ENSSMAG00000020820	trub2	84	54.152	ENSOPRG00000001981	TRUB2	84	54.152	Ochotona_princeps
ENSSMAG00000020820	trub2	84	57.554	ENSODEG00000017292	TRUB2	87	55.556	Octodon_degus
ENSSMAG00000020820	trub2	99	72.308	ENSONIG00000004230	trub2	98	72.308	Oreochromis_niloticus
ENSSMAG00000020820	trub2	57	53.191	ENSOANG00000029023	-	83	53.191	Ornithorhynchus_anatinus
ENSSMAG00000020820	trub2	95	51.592	ENSOCUG00000026296	TRUB2	86	51.592	Oryctolagus_cuniculus
ENSSMAG00000020820	trub2	97	71.517	ENSORLG00000020011	trub2	97	71.517	Oryzias_latipes
ENSSMAG00000020820	trub2	97	71.875	ENSORLG00020011028	trub2	93	71.875	Oryzias_latipes_hni
ENSSMAG00000020820	trub2	97	71.875	ENSORLG00015007494	trub2	97	71.875	Oryzias_latipes_hsok
ENSSMAG00000020820	trub2	99	70.427	ENSOMEG00000006702	trub2	99	70.427	Oryzias_melastigma
ENSSMAG00000020820	trub2	84	56.475	ENSOARG00000010579	-	84	56.475	Ovis_aries
ENSSMAG00000020820	trub2	59	57.949	ENSOARG00000003785	-	81	56.098	Ovis_aries
ENSSMAG00000020820	trub2	97	52.960	ENSPPAG00000043146	TRUB2	97	52.960	Pan_paniscus
ENSSMAG00000020820	trub2	84	58.633	ENSPPRG00000006307	TRUB2	86	58.633	Panthera_pardus
ENSSMAG00000020820	trub2	84	58.993	ENSPTIG00000012366	TRUB2	86	58.993	Panthera_tigris_altaica
ENSSMAG00000020820	trub2	97	52.336	ENSPTRG00000021423	TRUB2	97	52.336	Pan_troglodytes
ENSSMAG00000020820	trub2	97	52.336	ENSPTRG00000052151	-	97	52.336	Pan_troglodytes
ENSSMAG00000020820	trub2	95	53.481	ENSPANG00000025856	TRUB2	95	53.481	Papio_anubis
ENSSMAG00000020820	trub2	90	67.797	ENSPKIG00000019769	trub2	96	67.797	Paramormyrops_kingsleyae
ENSSMAG00000020820	trub2	84	54.152	ENSPSIG00000015701	TRUB2	92	54.152	Pelodiscus_sinensis
ENSSMAG00000020820	trub2	89	74.237	ENSPMGG00000010206	trub2	92	74.237	Periophthalmus_magnuspinnatus
ENSSMAG00000020820	trub2	96	51.250	ENSPEMG00000017893	Trub2	96	51.250	Peromyscus_maniculatus_bairdii
ENSSMAG00000020820	trub2	84	57.554	ENSPCIG00000026731	TRUB2	89	57.554	Phascolarctos_cinereus
ENSSMAG00000020820	trub2	95	69.136	ENSPFOG00000018018	trub2	83	70.533	Poecilia_formosa
ENSSMAG00000020820	trub2	95	68.519	ENSPLAG00000010484	trub2	90	69.906	Poecilia_latipinna
ENSSMAG00000020820	trub2	98	69.069	ENSPMEG00000012913	trub2	99	69.069	Poecilia_mexicana
ENSSMAG00000020820	trub2	88	74.653	ENSPREG00000002549	trub2	88	73.826	Poecilia_reticulata
ENSSMAG00000020820	trub2	95	53.165	ENSPPYG00000019650	TRUB2	97	53.165	Pongo_abelii
ENSSMAG00000020820	trub2	84	57.554	ENSPCAG00000015068	TRUB2	85	57.554	Procavia_capensis
ENSSMAG00000020820	trub2	84	58.633	ENSPCOG00000017100	TRUB2	84	58.633	Propithecus_coquereli
ENSSMAG00000020820	trub2	79	56.923	ENSPVAG00000001224	TRUB2	87	56.923	Pteropus_vampyrus
ENSSMAG00000020820	trub2	100	72.121	ENSPNYG00000013666	trub2	100	72.121	Pundamilia_nyererei
ENSSMAG00000020820	trub2	99	56.231	ENSPNAG00000017292	trub2	94	56.231	Pygocentrus_nattereri
ENSSMAG00000020820	trub2	84	55.396	ENSRNOG00000043189	Trub2	86	55.396	Rattus_norvegicus
ENSSMAG00000020820	trub2	97	48.287	ENSRBIG00000006965	TRUB2	96	48.287	Rhinopithecus_bieti
ENSSMAG00000020820	trub2	97	53.583	ENSRROG00000042928	TRUB2	97	53.583	Rhinopithecus_roxellana
ENSSMAG00000020820	trub2	97	52.648	ENSSBOG00000022439	TRUB2	97	52.648	Saimiri_boliviensis_boliviensis
ENSSMAG00000020820	trub2	88	64.236	ENSSFOG00015013391	trub2	92	64.236	Scleropages_formosus
ENSSMAG00000020820	trub2	88	84.536	ENSSDUG00000016928	trub2	97	78.154	Seriola_dumerili
ENSSMAG00000020820	trub2	99	77.846	ENSSLDG00000024701	trub2	97	77.846	Seriola_lalandi_dorsalis
ENSSMAG00000020820	trub2	85	53.381	ENSSPUG00000015515	TRUB2	84	53.381	Sphenodon_punctatus
ENSSMAG00000020820	trub2	91	80.602	ENSSPAG00000017865	trub2	91	80.602	Stegastes_partitus
ENSSMAG00000020820	trub2	95	53.185	ENSSSCG00000005645	TRUB2	96	51.228	Sus_scrofa
ENSSMAG00000020820	trub2	75	55.777	ENSTGUG00000003704	TRUB2	94	55.777	Taeniopygia_guttata
ENSSMAG00000020820	trub2	99	67.278	ENSTRUG00000015499	trub2	99	67.278	Takifugu_rubripes
ENSSMAG00000020820	trub2	89	76.027	ENSTNIG00000014721	trub2	100	76.027	Tetraodon_nigroviridis
ENSSMAG00000020820	trub2	54	56.180	ENSTBEG00000000586	TRUB2	79	56.180	Tupaia_belangeri
ENSSMAG00000020820	trub2	84	55.036	ENSTTRG00000016486	TRUB2	84	55.036	Tursiops_truncatus
ENSSMAG00000020820	trub2	97	52.174	ENSUAMG00000020276	TRUB2	94	52.174	Ursus_americanus
ENSSMAG00000020820	trub2	97	52.174	ENSUMAG00000022051	TRUB2	94	52.174	Ursus_maritimus
ENSSMAG00000020820	trub2	84	44.604	ENSVPAG00000005793	TRUB2	87	44.604	Vicugna_pacos
ENSSMAG00000020820	trub2	84	57.706	ENSVVUG00000013451	TRUB2	79	57.706	Vulpes_vulpes
ENSSMAG00000020820	trub2	88	54.296	ENSXETG00000003973	trub2	89	54.296	Xenopus_tropicalis
ENSSMAG00000020820	trub2	98	68.373	ENSXCOG00000008759	trub2	99	68.675	Xiphophorus_couchianus
ENSSMAG00000020820	trub2	98	68.373	ENSXMAG00000015478	trub2	99	68.675	Xiphophorus_maculatus