EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000020842 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 23317 bases
Position: chr7:26745479-26768795
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000034071	tRNA-synt_1g	PF09334.11	6.4e-14	1	1
ENSSMAP00000034069	tRNA-synt_1g	PF09334.11	1.3e-13	1	1
ENSSMAP00000034071	Anticodon_1	PF08264.13	1.2e-38	1	1
ENSSMAP00000034069	Anticodon_1	PF08264.13	1.3e-38	1	1
ENSSMAP00000034069	tRNA-synt_1	PF00133.22	1.7e-191	1	1
ENSSMAP00000034071	tRNA-synt_1	PF00133.22	5.6e-175	1	2
ENSSMAP00000034071	tRNA-synt_1	PF00133.22	5.6e-175	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000034508	-	3600	-	ENSSMAP00000034071	1003 (aa)	-	-
ENSSMAT00000034506	-	3798	-	ENSSMAP00000034069	1069 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000020842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000020842	vars2	92	48.111	ENSSMAG00000009596	vars	77	48.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000020842	vars2	99	78.393	ENSAPOG00000007396	vars2	100	78.578	Acanthochromis_polyacanthus
ENSSMAG00000020842	vars2	97	52.964	ENSAMEG00000012997	VARS2	92	53.177	Ailuropoda_melanoleuca
ENSSMAG00000020842	vars2	100	79.443	ENSACIG00000004344	vars2	100	78.047	Amphilophus_citrinellus
ENSSMAG00000020842	vars2	99	78.947	ENSAOCG00000000476	vars2	100	79.132	Amphiprion_ocellaris
ENSSMAG00000020842	vars2	99	78.670	ENSAPEG00000008646	vars2	97	78.855	Amphiprion_percula
ENSSMAG00000020842	vars2	99	82.140	ENSATEG00000012291	vars2	100	82.140	Anabas_testudineus
ENSSMAG00000020842	vars2	96	53.565	ENSACAG00000022093	VARS2	95	53.520	Anolis_carolinensis
ENSSMAG00000020842	vars2	97	51.582	ENSANAG00000038018	VARS2	93	52.075	Aotus_nancymaae
ENSSMAG00000020842	vars2	99	77.911	ENSACLG00000018673	vars2	100	77.819	Astatotilapia_calliptera
ENSSMAG00000020842	vars2	99	70.748	ENSAMXG00000017773	vars2	99	72.293	Astyanax_mexicanus
ENSSMAG00000020842	vars2	98	51.894	ENSBTAG00000010698	VARS2	92	53.194	Bos_taurus
ENSSMAG00000020842	vars2	97	51.437	ENSCJAG00000019826	VARS2	93	52.024	Callithrix_jacchus
ENSSMAG00000020842	vars2	97	52.722	ENSCAFG00000000454	VARS2	92	53.854	Canis_familiaris
ENSSMAG00000020842	vars2	87	55.124	ENSCAFG00020019387	VARS2	89	58.188	Canis_lupus_dingo
ENSSMAG00000020842	vars2	98	51.894	ENSCHIG00000007847	VARS2	92	53.194	Capra_hircus
ENSSMAG00000020842	vars2	98	52.701	ENSTSYG00000009904	VARS2	92	54.116	Carlito_syrichta
ENSSMAG00000020842	vars2	88	53.879	ENSCAPG00000017770	VARS2	99	53.879	Cavia_aperea
ENSSMAG00000020842	vars2	98	52.178	ENSCPOG00000021834	VARS2	92	53.685	Cavia_porcellus
ENSSMAG00000020842	vars2	97	52.011	ENSCCAG00000037907	VARS2	93	52.616	Cebus_capucinus
ENSSMAG00000020842	vars2	97	52.157	ENSCATG00000032554	VARS2	93	52.767	Cercocebus_atys
ENSSMAG00000020842	vars2	98	52.846	ENSCLAG00000002889	VARS2	93	53.610	Chinchilla_lanigera
ENSSMAG00000020842	vars2	96	52.657	ENSCSAG00000008327	VARS2	91	53.978	Chlorocebus_sabaeus
ENSSMAG00000020842	vars2	91	55.864	ENSCPBG00000021502	VARS2	95	56.846	Chrysemys_picta_bellii
ENSSMAG00000020842	vars2	97	51.965	ENSCANG00000014991	VARS2	92	52.569	Colobus_angolensis_palliatus
ENSSMAG00000020842	vars2	98	52.841	ENSCGRG00001021535	Vars2	92	54.309	Cricetulus_griseus_chok1gshd
ENSSMAG00000020842	vars2	98	52.841	ENSCGRG00000014112	Vars2	92	54.309	Cricetulus_griseus_crigri
ENSSMAG00000020842	vars2	89	78.414	ENSCSEG00000015432	vars2	99	78.022	Cynoglossus_semilaevis
ENSSMAG00000020842	vars2	65	78.329	ENSCVAG00000017765	vars2	98	78.329	Cyprinodon_variegatus
ENSSMAG00000020842	vars2	99	70.629	ENSDARG00000056717	vars2	99	69.418	Danio_rerio
ENSSMAG00000020842	vars2	79	51.472	ENSDORG00000008516	Vars2	92	51.472	Dipodomys_ordii
ENSSMAG00000020842	vars2	98	57.818	ENSETEG00000014844	VARS2	86	66.210	Echinops_telfairi
ENSSMAG00000020842	vars2	98	51.573	ENSEASG00005019997	VARS2	83	70.051	Equus_asinus_asinus
ENSSMAG00000020842	vars2	98	52.038	ENSECAG00000018202	VARS2	92	53.447	Equus_caballus
ENSSMAG00000020842	vars2	63	58.824	ENSEEUG00000012591	-	62	58.824	Erinaceus_europaeus
ENSSMAG00000020842	vars2	99	72.852	ENSELUG00000017824	vars2	99	70.718	Esox_lucius
ENSSMAG00000020842	vars2	97	52.627	ENSFCAG00000010531	VARS2	92	53.746	Felis_catus
ENSSMAG00000020842	vars2	94	53.346	ENSFDAG00000017216	VARS2	92	53.266	Fukomys_damarensis
ENSSMAG00000020842	vars2	93	72.736	ENSFHEG00000013932	vars2	98	72.239	Fundulus_heteroclitus
ENSSMAG00000020842	vars2	89	81.481	ENSGMOG00000018960	vars2	93	81.481	Gadus_morhua
ENSSMAG00000020842	vars2	92	76.127	ENSGAFG00000004737	vars2	100	76.127	Gambusia_affinis
ENSSMAG00000020842	vars2	93	84.722	ENSGACG00000001464	vars2	100	78.122	Gasterosteus_aculeatus
ENSSMAG00000020842	vars2	91	56.020	ENSGAGG00000011652	VARS2	98	56.020	Gopherus_agassizii
ENSSMAG00000020842	vars2	97	52.011	ENSGGOG00000014587	VARS2	93	52.616	Gorilla_gorilla
ENSSMAG00000020842	vars2	99	75.046	ENSHBUG00000002448	vars2	100	74.954	Haplochromis_burtoni
ENSSMAG00000020842	vars2	97	52.053	ENSHGLG00000012886	VARS2	90	53.017	Heterocephalus_glaber_female
ENSSMAG00000020842	vars2	97	51.958	ENSHGLG00100016535	VARS2	93	52.819	Heterocephalus_glaber_male
ENSSMAG00000020842	vars2	70	74.614	ENSHCOG00000017907	vars2	99	75.067	Hippocampus_comes
ENSSMAG00000020842	vars2	93	80.822	ENSIPUG00000015573	Vars2	95	71.623	Ictalurus_punctatus
ENSSMAG00000020842	vars2	97	51.724	ENSSTOG00000009924	VARS2	93	52.372	Ictidomys_tridecemlineatus
ENSSMAG00000020842	vars2	95	52.999	ENSJJAG00000011144	Vars2	93	52.725	Jaculus_jaculus
ENSSMAG00000020842	vars2	99	80.836	ENSKMAG00000001393	vars2	94	80.836	Kryptolebias_marmoratus
ENSSMAG00000020842	vars2	52	84.058	ENSLBEG00000005480	-	81	84.058	Labrus_bergylta
ENSSMAG00000020842	vars2	99	76.362	ENSLBEG00000011949	vars2	99	76.085	Labrus_bergylta
ENSSMAG00000020842	vars2	96	51.245	ENSLACG00000001576	-	97	52.012	Latimeria_chalumnae
ENSSMAG00000020842	vars2	97	52.436	ENSLAFG00000015183	VARS2	93	53.110	Loxodonta_africana
ENSSMAG00000020842	vars2	97	51.870	ENSMFAG00000042367	VARS2	93	52.574	Macaca_fascicularis
ENSSMAG00000020842	vars2	97	51.965	ENSMMUG00000018609	VARS2	93	52.673	Macaca_mulatta
ENSSMAG00000020842	vars2	97	51.965	ENSMNEG00000043163	VARS2	93	52.673	Macaca_nemestrina
ENSSMAG00000020842	vars2	97	52.061	ENSMLEG00000041728	VARS2	91	52.767	Mandrillus_leucophaeus
ENSSMAG00000020842	vars2	99	78.035	ENSMAMG00000020339	vars2	99	78.035	Mastacembelus_armatus
ENSSMAG00000020842	vars2	99	77.819	ENSMZEG00005017669	vars2	100	77.726	Maylandia_zebra
ENSSMAG00000020842	vars2	98	52.318	ENSMAUG00000018946	Vars2	92	54.016	Mesocricetus_auratus
ENSSMAG00000020842	vars2	82	57.143	ENSMICG00000005365	VARS2	93	58.760	Microcebus_murinus
ENSSMAG00000020842	vars2	91	58.955	ENSMOCG00000014607	Vars2	95	59.745	Microtus_ochrogaster
ENSSMAG00000020842	vars2	99	79.861	ENSMMOG00000012122	vars2	100	77.684	Mola_mola
ENSSMAG00000020842	vars2	93	55.749	ENSMODG00000015848	VARS2	82	62.609	Monodelphis_domestica
ENSSMAG00000020842	vars2	93	85.845	ENSMALG00000009217	vars2	93	85.845	Monopterus_albus
ENSSMAG00000020842	vars2	97	52.431	MGP_CAROLIEiJ_G0021529	Vars2	96	56.328	Mus_caroli
ENSSMAG00000020842	vars2	97	52.050	ENSMUSG00000038838	Vars2	98	55.497	Mus_musculus
ENSSMAG00000020842	vars2	97	52.596	MGP_PahariEiJ_G0020523	Vars2	95	56.429	Mus_pahari
ENSSMAG00000020842	vars2	97	52.431	MGP_SPRETEiJ_G0022436	Vars2	93	57.038	Mus_spretus
ENSSMAG00000020842	vars2	97	52.677	ENSMPUG00000011643	VARS2	92	53.846	Mustela_putorius_furo
ENSSMAG00000020842	vars2	94	53.320	ENSMLUG00000002356	VARS2	87	54.274	Myotis_lucifugus
ENSSMAG00000020842	vars2	97	47.656	ENSNGAG00000020607	Vars2	90	49.287	Nannospalax_galili
ENSSMAG00000020842	vars2	59	82.895	ENSNBRG00000001624	vars2	57	82.623	Neolamprologus_brichardi
ENSSMAG00000020842	vars2	95	51.949	ENSNLEG00000005625	VARS2	91	52.563	Nomascus_leucogenys
ENSSMAG00000020842	vars2	79	57.667	ENSMEUG00000014475	VARS2	90	57.667	Notamacropus_eugenii
ENSSMAG00000020842	vars2	91	54.839	ENSOPRG00000000682	VARS2	83	62.048	Ochotona_princeps
ENSSMAG00000020842	vars2	98	52.412	ENSODEG00000017965	VARS2	92	54.016	Octodon_degus
ENSSMAG00000020842	vars2	93	59.531	ENSONIG00000004734	vars2	100	59.531	Oreochromis_niloticus
ENSSMAG00000020842	vars2	77	42.146	ENSOANG00000000398	-	94	42.092	Ornithorhynchus_anatinus
ENSSMAG00000020842	vars2	96	49.663	ENSOCUG00000021496	VARS2	59	50.647	Oryctolagus_cuniculus
ENSSMAG00000020842	vars2	99	72.007	ENSORLG00000010632	vars2	99	72.007	Oryzias_latipes
ENSSMAG00000020842	vars2	99	71.823	ENSORLG00020018584	vars2	99	71.731	Oryzias_latipes_hni
ENSSMAG00000020842	vars2	99	72.192	ENSORLG00015010408	vars2	99	72.192	Oryzias_latipes_hsok
ENSSMAG00000020842	vars2	99	73.630	ENSOMEG00000008360	vars2	99	72.350	Oryzias_melastigma
ENSSMAG00000020842	vars2	95	52.386	ENSOGAG00000006087	VARS2	90	52.941	Otolemur_garnettii
ENSSMAG00000020842	vars2	98	51.189	ENSOARG00000010844	VARS2	91	52.295	Ovis_aries
ENSSMAG00000020842	vars2	97	52.011	ENSPPAG00000041141	VARS2	93	52.517	Pan_paniscus
ENSSMAG00000020842	vars2	97	52.531	ENSPPRG00000006751	VARS2	90	53.646	Panthera_pardus
ENSSMAG00000020842	vars2	97	52.436	ENSPTIG00000017799	VARS2	97	53.320	Panthera_tigris_altaica
ENSSMAG00000020842	vars2	97	52.011	ENSPTRG00000034497	VARS2	93	52.517	Pan_troglodytes
ENSSMAG00000020842	vars2	97	52.253	ENSPANG00000018481	VARS2	93	54.312	Papio_anubis
ENSSMAG00000020842	vars2	96	69.582	ENSPKIG00000011372	vars2	96	69.544	Paramormyrops_kingsleyae
ENSSMAG00000020842	vars2	59	63.679	ENSPSIG00000006206	VARS2	92	63.411	Pelodiscus_sinensis
ENSSMAG00000020842	vars2	99	71.322	ENSPMGG00000000465	vars2	99	71.322	Periophthalmus_magnuspinnatus
ENSSMAG00000020842	vars2	97	52.240	ENSPEMG00000014691	Vars2	92	53.614	Peromyscus_maniculatus_bairdii
ENSSMAG00000020842	vars2	92	53.776	ENSPCIG00000015040	VARS2	93	53.141	Phascolarctos_cinereus
ENSSMAG00000020842	vars2	99	77.617	ENSPFOG00000017616	vars2	90	83.065	Poecilia_formosa
ENSSMAG00000020842	vars2	99	77.352	ENSPLAG00000019778	vars2	91	83.401	Poecilia_latipinna
ENSSMAG00000020842	vars2	99	77.352	ENSPMEG00000011123	vars2	99	73.865	Poecilia_mexicana
ENSSMAG00000020842	vars2	97	66.667	ENSPREG00000014998	vars2	93	68.325	Poecilia_reticulata
ENSSMAG00000020842	vars2	97	52.203	ENSPPYG00000016424	VARS2	93	52.813	Pongo_abelii
ENSSMAG00000020842	vars2	61	73.134	ENSPCAG00000006946	VARS2	56	73.134	Procavia_capensis
ENSSMAG00000020842	vars2	98	50.851	ENSPCOG00000014839	VARS2	91	51.569	Propithecus_coquereli
ENSSMAG00000020842	vars2	98	51.859	ENSPVAG00000004197	VARS2	92	53.100	Pteropus_vampyrus
ENSSMAG00000020842	vars2	86	83.827	ENSPNYG00000010314	vars2	100	83.827	Pundamilia_nyererei
ENSSMAG00000020842	vars2	96	77.510	ENSPNAG00000026793	vars2	89	77.733	Pygocentrus_nattereri
ENSSMAG00000020842	vars2	96	52.913	ENSRNOG00000000833	Vars2	92	53.815	Rattus_norvegicus
ENSSMAG00000020842	vars2	97	52.061	ENSRBIG00000032725	VARS2	92	53.367	Rhinopithecus_bieti
ENSSMAG00000020842	vars2	97	51.965	ENSRROG00000043847	VARS2	93	52.569	Rhinopithecus_roxellana
ENSSMAG00000020842	vars2	96	51.183	ENSSBOG00000033240	VARS2	91	51.657	Saimiri_boliviensis_boliviensis
ENSSMAG00000020842	vars2	98	52.376	ENSSHAG00000009307	VARS2	93	53.440	Sarcophilus_harrisii
ENSSMAG00000020842	vars2	96	69.402	ENSSFOG00015016187	vars2	95	69.709	Scleropages_formosus
ENSSMAG00000020842	vars2	99	84.523	ENSSDUG00000011598	vars2	100	84.523	Seriola_dumerili
ENSSMAG00000020842	vars2	99	82.446	ENSSLDG00000015492	vars2	100	82.446	Seriola_lalandi_dorsalis
ENSSMAG00000020842	vars2	50	61.481	ENSSARG00000003786	-	61	61.481	Sorex_araneus
ENSSMAG00000020842	vars2	79	59.786	ENSSPUG00000014700	VARS2	87	59.786	Sphenodon_punctatus
ENSSMAG00000020842	vars2	99	77.736	ENSSPAG00000004654	vars2	99	77.736	Stegastes_partitus
ENSSMAG00000020842	vars2	97	52.541	ENSSSCG00000001384	VARS2	92	56.116	Sus_scrofa
ENSSMAG00000020842	vars2	99	77.536	ENSTRUG00000005264	vars2	99	74.324	Takifugu_rubripes
ENSSMAG00000020842	vars2	96	81.124	ENSTNIG00000005916	vars2	89	81.377	Tetraodon_nigroviridis
ENSSMAG00000020842	vars2	79	52.657	ENSTTRG00000012243	VARS2	76	62.745	Tursiops_truncatus
ENSSMAG00000020842	vars2	97	52.964	ENSUAMG00000026124	VARS2	99	54.243	Ursus_americanus
ENSSMAG00000020842	vars2	97	53.014	ENSUMAG00000019894	VARS2	94	53.372	Ursus_maritimus
ENSSMAG00000020842	vars2	98	52.512	ENSVVUG00000010754	VARS2	87	53.854	Vulpes_vulpes
ENSSMAG00000020842	vars2	83	66.857	ENSXETG00000003036	vars2	87	66.857	Xenopus_tropicalis
ENSSMAG00000020842	vars2	97	77.692	ENSXCOG00000003455	vars2	99	77.308	Xiphophorus_couchianus
ENSSMAG00000020842	vars2	99	76.574	ENSXMAG00000013523	vars2	99	76.574	Xiphophorus_maculatus