EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000020844 (Gene tree)
Gene ID: -
Gene Symbol: patz1
Alias: -
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4095 bases
Position: chr6:12074884-12078978
Accession: ZDB-GENE-111223-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000034072	zf-C2H2	PF00096.26	6.6e-23	1	3
ENSSMAP00000034072	zf-C2H2	PF00096.26	6.6e-23	2	3
ENSSMAP00000034072	zf-C2H2	PF00096.26	6.6e-23	3	3
ENSSMAP00000034072	zf-met	PF12874.7	8.3e-09	1	2
ENSSMAP00000034072	zf-met	PF12874.7	8.3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000034509	-	966	-	ENSSMAP00000034072	321 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000020844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000020844	patz1	61	36.585	ENSSMAG00000008907	zbtb41	61	36.585
ENSSMAG00000020844	patz1	64	37.288	ENSSMAG00000003594	-	88	37.288
ENSSMAG00000020844	patz1	71	37.079	ENSSMAG00000005081	-	81	37.079
ENSSMAG00000020844	patz1	54	37.079	ENSSMAG00000015041	si:dkey-7i4.5	89	37.349
ENSSMAG00000020844	patz1	60	31.319	ENSSMAG00000005122	-	58	31.319
ENSSMAG00000020844	patz1	74	35.172	ENSSMAG00000013676	-	81	35.172
ENSSMAG00000020844	patz1	73	35.465	ENSSMAG00000007396	-	80	35.465
ENSSMAG00000020844	patz1	70	35.714	ENSSMAG00000015282	-	79	35.928
ENSSMAG00000020844	patz1	51	34.940	ENSSMAG00000006825	-	77	34.940
ENSSMAG00000020844	patz1	56	39.130	ENSSMAG00000013291	-	86	38.583
ENSSMAG00000020844	patz1	63	37.143	ENSSMAG00000019980	-	64	37.143
ENSSMAG00000020844	patz1	68	36.310	ENSSMAG00000005076	-	99	37.719
ENSSMAG00000020844	patz1	68	37.705	ENSSMAG00000014864	-	88	37.349
ENSSMAG00000020844	patz1	83	40.000	ENSSMAG00000009685	-	93	40.000
ENSSMAG00000020844	patz1	62	31.868	ENSSMAG00000019207	scrt1b	61	31.868
ENSSMAG00000020844	patz1	64	38.824	ENSSMAG00000015181	gfi1b	55	37.931
ENSSMAG00000020844	patz1	57	37.647	ENSSMAG00000015849	znf319b	78	37.647
ENSSMAG00000020844	patz1	51	48.980	ENSSMAG00000009609	-	89	48.980
ENSSMAG00000020844	patz1	77	40.708	ENSSMAG00000015347	-	77	40.708
ENSSMAG00000020844	patz1	68	33.333	ENSSMAG00000002391	ZNF319	82	33.333
ENSSMAG00000020844	patz1	56	34.884	ENSSMAG00000013828	-	60	38.889
ENSSMAG00000020844	patz1	63	44.318	ENSSMAG00000009115	-	86	38.372
ENSSMAG00000020844	patz1	68	38.323	ENSSMAG00000021251	-	98	37.273
ENSSMAG00000020844	patz1	55	36.000	ENSSMAG00000014844	-	73	36.000
ENSSMAG00000020844	patz1	62	40.230	ENSSMAG00000017045	-	58	40.230
ENSSMAG00000020844	patz1	61	33.728	ENSSMAG00000019364	snai2	62	33.728
ENSSMAG00000020844	patz1	53	38.788	ENSSMAG00000019949	-	57	38.788
ENSSMAG00000020844	patz1	65	42.593	ENSSMAG00000015356	-	75	41.975
ENSSMAG00000020844	patz1	51	44.231	ENSSMAG00000004429	-	80	44.231
ENSSMAG00000020844	patz1	82	40.741	ENSSMAG00000013663	-	93	38.843
ENSSMAG00000020844	patz1	64	36.364	ENSSMAG00000021271	-	63	36.364
ENSSMAG00000020844	patz1	63	33.796	ENSSMAG00000004252	-	83	35.329
ENSSMAG00000020844	patz1	70	36.111	ENSSMAG00000007561	znf236	55	36.111
ENSSMAG00000020844	patz1	83	39.259	ENSSMAG00000006197	-	93	43.182
ENSSMAG00000020844	patz1	75	38.462	ENSSMAG00000018844	prdm5	69	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000020844	patz1	72	86.235	ENSMALG00000021172	patz1	56	71.863	Monopterus_albus
ENSSMAG00000020844	patz1	69	93.636	ENSORLG00015007396	patz1	51	97.605	Oryzias_latipes_hsok
ENSSMAG00000020844	patz1	75	89.167	ENSOMEG00000006636	patz1	51	98.204	Oryzias_melastigma
ENSSMAG00000020844	patz1	76	68.980	ENSPSIG00000016553	-	64	68.980	Pelodiscus_sinensis
ENSSMAG00000020844	patz1	69	75.225	ENSPSIG00000011562	-	87	82.840	Pelodiscus_sinensis
ENSSMAG00000020844	patz1	64	91.667	ENSPMGG00000010196	patz1	50	91.667	Periophthalmus_magnuspinnatus