EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000020851 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5423 bases
Position: chr7:26813840-26819262
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000034077	RRM_1	PF00076.22	8.6e-26	1	2
ENSSMAP00000034077	RRM_1	PF00076.22	8.6e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000034517	-	1198	-	ENSSMAP00000034077	310 (aa)	-	A0A2U9BLM2

Gene Model

Click here to download ENSSMAG00000020851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000020851	trnau1apa	95	41.141	ENSSMAG00000001745	trnau1apb	51	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000020851	trnau1apa	98	57.049	ENSG00000180098	TRNAU1AP	98	53.722	Homo_sapiens
ENSSMAG00000020851	trnau1apa	100	84.887	ENSAPOG00000007148	TRNAU1AP	100	82.315	Acanthochromis_polyacanthus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSAMEG00000011367	TRNAU1AP	98	55.738	Ailuropoda_melanoleuca
ENSSMAG00000020851	trnau1apa	91	92.135	ENSACIG00000004161	trnau1apa	93	92.135	Amphilophus_citrinellus
ENSSMAG00000020851	trnau1apa	100	85.852	ENSAOCG00000008056	trnau1apa	100	83.601	Amphiprion_ocellaris
ENSSMAG00000020851	trnau1apa	100	85.852	ENSAPEG00000008868	trnau1apa	100	83.601	Amphiprion_percula
ENSSMAG00000020851	trnau1apa	100	84.591	ENSATEG00000012140	trnau1apa	100	83.019	Anabas_testudineus
ENSSMAG00000020851	trnau1apa	92	57.692	ENSAPLG00000002606	TRNAU1AP	98	56.055	Anas_platyrhynchos
ENSSMAG00000020851	trnau1apa	75	35.345	ENSACAG00000004205	-	86	34.800	Anolis_carolinensis
ENSSMAG00000020851	trnau1apa	95	47.826	ENSACAG00000003995	-	97	47.841	Anolis_carolinensis
ENSSMAG00000020851	trnau1apa	98	57.049	ENSANAG00000018976	TRNAU1AP	98	53.722	Aotus_nancymaae
ENSSMAG00000020851	trnau1apa	100	83.280	ENSACLG00000018515	trnau1apa	100	81.994	Astatotilapia_calliptera
ENSSMAG00000020851	trnau1apa	99	52.366	ENSAMXG00000013750	trnau1apa	97	51.724	Astyanax_mexicanus
ENSSMAG00000020851	trnau1apa	93	69.318	ENSAMXG00000029240	-	97	69.318	Astyanax_mexicanus
ENSSMAG00000020851	trnau1apa	98	56.721	ENSBTAG00000010393	TRNAU1AP	98	53.398	Bos_taurus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSCJAG00000009717	TRNAU1AP	98	53.722	Callithrix_jacchus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSCAFG00000011735	TRNAU1AP	98	53.722	Canis_familiaris
ENSSMAG00000020851	trnau1apa	98	57.049	ENSCAFG00020023584	TRNAU1AP	98	53.722	Canis_lupus_dingo
ENSSMAG00000020851	trnau1apa	99	56.494	ENSCHIG00000023215	TRNAU1AP	99	53.205	Capra_hircus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSTSYG00000003506	TRNAU1AP	98	55.738	Carlito_syrichta
ENSSMAG00000020851	trnau1apa	98	57.049	ENSCPOG00000001925	TRNAU1AP	98	53.722	Cavia_porcellus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSCCAG00000037506	TRNAU1AP	98	53.722	Cebus_capucinus
ENSSMAG00000020851	trnau1apa	98	56.721	ENSCATG00000044617	TRNAU1AP	98	55.410	Cercocebus_atys
ENSSMAG00000020851	trnau1apa	98	57.049	ENSCLAG00000008223	TRNAU1AP	98	53.722	Chinchilla_lanigera
ENSSMAG00000020851	trnau1apa	98	56.721	ENSCSAG00000001014	TRNAU1AP	98	55.410	Chlorocebus_sabaeus
ENSSMAG00000020851	trnau1apa	95	54.882	ENSCPBG00000000121	TRNAU1AP	99	54.545	Chrysemys_picta_bellii
ENSSMAG00000020851	trnau1apa	52	47.205	ENSCSAVG00000011781	-	84	47.500	Ciona_savignyi
ENSSMAG00000020851	trnau1apa	98	49.180	ENSCANG00000041949	TRNAU1AP	98	50.761	Colobus_angolensis_palliatus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSCGRG00001004713	Trnau1ap	98	53.722	Cricetulus_griseus_chok1gshd
ENSSMAG00000020851	trnau1apa	98	57.049	ENSCGRG00000014532	Trnau1ap	98	53.722	Cricetulus_griseus_crigri
ENSSMAG00000020851	trnau1apa	100	80.757	ENSCSEG00000006663	trnau1apa	100	75.399	Cynoglossus_semilaevis
ENSSMAG00000020851	trnau1apa	99	75.728	ENSCVAG00000018069	trnau1apa	99	77.994	Cyprinodon_variegatus
ENSSMAG00000020851	trnau1apa	99	48.742	ENSDARG00000101323	trnau1apa	95	46.541	Danio_rerio
ENSSMAG00000020851	trnau1apa	56	57.471	ENSDNOG00000047959	-	89	58.140	Dasypus_novemcinctus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSDNOG00000033009	TRNAU1AP	98	53.722	Dasypus_novemcinctus
ENSSMAG00000020851	trnau1apa	98	53.618	ENSDORG00000006349	Trnau1ap	98	51.316	Dipodomys_ordii
ENSSMAG00000020851	trnau1apa	96	34.627	FBgn0031607	CG15440	50	46.707	Drosophila_melanogaster
ENSSMAG00000020851	trnau1apa	84	54.580	ENSETEG00000012594	TRNAU1AP	98	53.053	Echinops_telfairi
ENSSMAG00000020851	trnau1apa	62	44.318	ENSEBUG00000006349	-	58	44.318	Eptatretus_burgeri
ENSSMAG00000020851	trnau1apa	98	57.049	ENSEASG00005010062	TRNAU1AP	90	64.384	Equus_asinus_asinus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSECAG00000012980	TRNAU1AP	90	64.384	Equus_caballus
ENSSMAG00000020851	trnau1apa	92	76.136	ENSELUG00000022790	-	93	76.136	Esox_lucius
ENSSMAG00000020851	trnau1apa	100	74.121	ENSELUG00000017686	trnau1apa	100	73.397	Esox_lucius
ENSSMAG00000020851	trnau1apa	98	57.049	ENSFCAG00000013401	TRNAU1AP	98	53.722	Felis_catus
ENSSMAG00000020851	trnau1apa	95	55.442	ENSFALG00000001371	TRNAU1AP	99	54.545	Ficedula_albicollis
ENSSMAG00000020851	trnau1apa	99	56.818	ENSFDAG00000018599	TRNAU1AP	99	55.519	Fukomys_damarensis
ENSSMAG00000020851	trnau1apa	78	83.401	ENSFHEG00000018232	trnau1apa	86	80.228	Fundulus_heteroclitus
ENSSMAG00000020851	trnau1apa	100	62.069	ENSGMOG00000016508	trnau1apa	99	59.006	Gadus_morhua
ENSSMAG00000020851	trnau1apa	69	38.288	ENSGALG00000012721	C2H6orf52	79	33.750	Gallus_gallus
ENSSMAG00000020851	trnau1apa	98	55.410	ENSGALG00000001310	-	98	54.426	Gallus_gallus
ENSSMAG00000020851	trnau1apa	80	82.258	ENSGAFG00000004928	trnau1apa	95	82.283	Gambusia_affinis
ENSSMAG00000020851	trnau1apa	100	87.742	ENSGACG00000001443	trnau1apa	100	86.452	Gasterosteus_aculeatus
ENSSMAG00000020851	trnau1apa	95	56.463	ENSGAGG00000004940	TRNAU1AP	99	54.545	Gopherus_agassizii
ENSSMAG00000020851	trnau1apa	98	57.049	ENSGGOG00000003511	TRNAU1AP	98	53.722	Gorilla_gorilla
ENSSMAG00000020851	trnau1apa	100	93.333	ENSHBUG00000002510	trnau1apa	94	93.333	Haplochromis_burtoni
ENSSMAG00000020851	trnau1apa	98	57.049	ENSHGLG00000010380	TRNAU1AP	98	55.738	Heterocephalus_glaber_female
ENSSMAG00000020851	trnau1apa	98	55.410	ENSHGLG00100012699	TRNAU1AP	98	52.104	Heterocephalus_glaber_male
ENSSMAG00000020851	trnau1apa	99	73.248	ENSHCOG00000014770	trnau1apa	99	69.010	Hippocampus_comes
ENSSMAG00000020851	trnau1apa	98	57.049	ENSSTOG00000000079	TRNAU1AP	98	53.722	Ictidomys_tridecemlineatus
ENSSMAG00000020851	trnau1apa	98	56.721	ENSJJAG00000010128	Trnau1ap	98	53.398	Jaculus_jaculus
ENSSMAG00000020851	trnau1apa	100	82.315	ENSKMAG00000001230	trnau1apa	100	81.029	Kryptolebias_marmoratus
ENSSMAG00000020851	trnau1apa	100	78.193	ENSLBEG00000011683	trnau1apa	100	75.157	Labrus_bergylta
ENSSMAG00000020851	trnau1apa	99	48.544	ENSLACG00000005541	TRNAU1AP	99	48.397	Latimeria_chalumnae
ENSSMAG00000020851	trnau1apa	98	58.497	ENSLOCG00000004041	trnau1apa	99	55.556	Lepisosteus_oculatus
ENSSMAG00000020851	trnau1apa	98	57.377	ENSLAFG00000007628	TRNAU1AP	98	54.045	Loxodonta_africana
ENSSMAG00000020851	trnau1apa	98	56.721	ENSMFAG00000043751	TRNAU1AP	98	55.410	Macaca_fascicularis
ENSSMAG00000020851	trnau1apa	98	56.721	ENSMMUG00000006561	TRNAU1AP	98	55.410	Macaca_mulatta
ENSSMAG00000020851	trnau1apa	98	56.721	ENSMNEG00000044201	TRNAU1AP	98	55.410	Macaca_nemestrina
ENSSMAG00000020851	trnau1apa	98	56.721	ENSMLEG00000015649	TRNAU1AP	98	55.410	Mandrillus_leucophaeus
ENSSMAG00000020851	trnau1apa	99	88.462	ENSMAMG00000001247	trnau1apa	100	86.218	Mastacembelus_armatus
ENSSMAG00000020851	trnau1apa	100	83.280	ENSMZEG00005017722	trnau1apa	100	81.994	Maylandia_zebra
ENSSMAG00000020851	trnau1apa	96	55.705	ENSMGAG00000002105	TRNAU1AP	99	54.362	Meleagris_gallopavo
ENSSMAG00000020851	trnau1apa	98	57.049	ENSMICG00000008386	TRNAU1AP	98	53.722	Microcebus_murinus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSMOCG00000011189	Trnau1ap	98	53.722	Microtus_ochrogaster
ENSSMAG00000020851	trnau1apa	100	71.656	ENSMMOG00000012107	trnau1apa	99	67.093	Mola_mola
ENSSMAG00000020851	trnau1apa	98	56.066	ENSMODG00000010927	TRNAU1AP	98	52.885	Monodelphis_domestica
ENSSMAG00000020851	trnau1apa	100	88.818	ENSMALG00000016778	trnau1apa	100	87.220	Monopterus_albus
ENSSMAG00000020851	trnau1apa	98	56.721	MGP_CAROLIEiJ_G0026563	Trnau1ap	98	55.410	Mus_caroli
ENSSMAG00000020851	trnau1apa	98	56.721	ENSMUSG00000028898	Trnau1ap	98	55.410	Mus_musculus
ENSSMAG00000020851	trnau1apa	98	56.721	MGP_PahariEiJ_G0028896	Trnau1ap	84	71.186	Mus_pahari
ENSSMAG00000020851	trnau1apa	98	56.721	MGP_SPRETEiJ_G0027544	Trnau1ap	98	55.410	Mus_spretus
ENSSMAG00000020851	trnau1apa	99	57.143	ENSMPUG00000015511	TRNAU1AP	99	53.846	Mustela_putorius_furo
ENSSMAG00000020851	trnau1apa	98	57.049	ENSMLUG00000012586	TRNAU1AP	98	53.722	Myotis_lucifugus
ENSSMAG00000020851	trnau1apa	98	56.721	ENSNGAG00000015881	Trnau1ap	98	53.398	Nannospalax_galili
ENSSMAG00000020851	trnau1apa	100	71.019	ENSNBRG00000001758	trnau1apa	99	68.153	Neolamprologus_brichardi
ENSSMAG00000020851	trnau1apa	98	57.049	ENSNLEG00000009822	TRNAU1AP	98	53.722	Nomascus_leucogenys
ENSSMAG00000020851	trnau1apa	96	55.705	ENSMEUG00000006117	TRNAU1AP	99	54.698	Notamacropus_eugenii
ENSSMAG00000020851	trnau1apa	98	57.049	ENSODEG00000002970	TRNAU1AP	98	53.722	Octodon_degus
ENSSMAG00000020851	trnau1apa	80	84.400	ENSONIG00000004715	trnau1apa	97	82.800	Oreochromis_niloticus
ENSSMAG00000020851	trnau1apa	94	45.392	ENSOANG00000005325	-	95	44.257	Ornithorhynchus_anatinus
ENSSMAG00000020851	trnau1apa	98	55.738	ENSOCUG00000011704	-	98	54.754	Oryctolagus_cuniculus
ENSSMAG00000020851	trnau1apa	98	48.562	ENSOCUG00000002353	-	60	64.912	Oryctolagus_cuniculus
ENSSMAG00000020851	trnau1apa	85	48.302	ENSOCUG00000006834	-	67	53.488	Oryctolagus_cuniculus
ENSSMAG00000020851	trnau1apa	100	78.457	ENSORLG00000010428	trnau1apa	100	77.492	Oryzias_latipes
ENSSMAG00000020851	trnau1apa	100	78.457	ENSORLG00020000926	trnau1ap	100	77.492	Oryzias_latipes_hni
ENSSMAG00000020851	trnau1apa	100	78.457	ENSORLG00015009858	trnau1ap	100	77.492	Oryzias_latipes_hsok
ENSSMAG00000020851	trnau1apa	100	77.492	ENSOMEG00000007873	trnau1apa	100	76.527	Oryzias_melastigma
ENSSMAG00000020851	trnau1apa	98	57.049	ENSOGAG00000002274	TRNAU1AP	98	53.722	Otolemur_garnettii
ENSSMAG00000020851	trnau1apa	99	56.494	ENSOARG00000002843	TRNAU1AP	99	53.205	Ovis_aries
ENSSMAG00000020851	trnau1apa	98	57.049	ENSPPAG00000033927	TRNAU1AP	98	53.722	Pan_paniscus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSPPRG00000004416	TRNAU1AP	98	53.722	Panthera_pardus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSPTIG00000016677	TRNAU1AP	98	53.722	Panthera_tigris_altaica
ENSSMAG00000020851	trnau1apa	91	50.355	ENSPTRG00000000434	-	91	51.838	Pan_troglodytes
ENSSMAG00000020851	trnau1apa	98	56.721	ENSPANG00000016019	TRNAU1AP	98	55.410	Papio_anubis
ENSSMAG00000020851	trnau1apa	92	76.136	ENSPKIG00000022205	-	95	76.136	Paramormyrops_kingsleyae
ENSSMAG00000020851	trnau1apa	94	57.338	ENSPKIG00000015511	trnau1apa	93	56.314	Paramormyrops_kingsleyae
ENSSMAG00000020851	trnau1apa	95	55.782	ENSPSIG00000006864	TRNAU1AP	99	54.545	Pelodiscus_sinensis
ENSSMAG00000020851	trnau1apa	97	67.327	ENSPMGG00000023893	trnau1apa	96	64.333	Periophthalmus_magnuspinnatus
ENSSMAG00000020851	trnau1apa	98	56.721	ENSPEMG00000007877	Trnau1ap	98	53.398	Peromyscus_maniculatus_bairdii
ENSSMAG00000020851	trnau1apa	55	52.023	ENSPMAG00000000592	trnau1apa	95	52.023	Petromyzon_marinus
ENSSMAG00000020851	trnau1apa	75	49.138	ENSPMAG00000005934	trnau1apa	74	56.364	Petromyzon_marinus
ENSSMAG00000020851	trnau1apa	99	76.375	ENSPFOG00000008100	trnau1apa	99	77.023	Poecilia_formosa
ENSSMAG00000020851	trnau1apa	95	78.114	ENSPLAG00000010236	trnau1apa	99	76.768	Poecilia_latipinna
ENSSMAG00000020851	trnau1apa	99	76.299	ENSPMEG00000016387	trnau1apa	97	75.000	Poecilia_mexicana
ENSSMAG00000020851	trnau1apa	89	77.895	ENSPREG00000019821	trnau1apa	98	77.895	Poecilia_reticulata
ENSSMAG00000020851	trnau1apa	85	50.566	ENSPPYG00000001639	-	99	45.745	Pongo_abelii
ENSSMAG00000020851	trnau1apa	98	57.049	ENSPCOG00000027712	-	98	53.722	Propithecus_coquereli
ENSSMAG00000020851	trnau1apa	97	42.715	ENSPCOG00000023470	-	77	63.636	Propithecus_coquereli
ENSSMAG00000020851	trnau1apa	98	57.049	ENSPVAG00000017214	TRNAU1AP	98	53.722	Pteropus_vampyrus
ENSSMAG00000020851	trnau1apa	100	81.962	ENSPNYG00000010130	trnau1apa	100	80.696	Pundamilia_nyererei
ENSSMAG00000020851	trnau1apa	99	50.637	ENSPNAG00000024905	trnau1apa	84	64.118	Pygocentrus_nattereri
ENSSMAG00000020851	trnau1apa	85	55.472	ENSRNOG00000055344	Trnau1ap	58	68.421	Rattus_norvegicus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSRBIG00000029083	TRNAU1AP	98	53.722	Rhinopithecus_bieti
ENSSMAG00000020851	trnau1apa	98	57.049	ENSRROG00000029128	TRNAU1AP	98	53.722	Rhinopithecus_roxellana
ENSSMAG00000020851	trnau1apa	98	57.049	ENSSBOG00000021299	TRNAU1AP	98	53.722	Saimiri_boliviensis_boliviensis
ENSSMAG00000020851	trnau1apa	98	56.066	ENSSHAG00000008108	TRNAU1AP	98	52.885	Sarcophilus_harrisii
ENSSMAG00000020851	trnau1apa	100	90.415	ENSSDUG00000011734	trnau1apa	100	87.540	Seriola_dumerili
ENSSMAG00000020851	trnau1apa	100	69.677	ENSSLDG00000012101	trnau1apa	99	65.161	Seriola_lalandi_dorsalis
ENSSMAG00000020851	trnau1apa	96	57.047	ENSSARG00000007536	TRNAU1AP	99	55.705	Sorex_araneus
ENSSMAG00000020851	trnau1apa	98	53.443	ENSSPUG00000010400	-	99	52.131	Sphenodon_punctatus
ENSSMAG00000020851	trnau1apa	64	50.254	ENSSPUG00000010415	-	99	46.193	Sphenodon_punctatus
ENSSMAG00000020851	trnau1apa	100	86.495	ENSSPAG00000005029	trnau1apa	100	84.566	Stegastes_partitus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSSSCG00000030284	TRNAU1AP	98	53.722	Sus_scrofa
ENSSMAG00000020851	trnau1apa	69	39.535	ENSTGUG00000005908	-	99	37.668	Taeniopygia_guttata
ENSSMAG00000020851	trnau1apa	96	56.040	ENSTGUG00000000735	-	99	54.817	Taeniopygia_guttata
ENSSMAG00000020851	trnau1apa	100	81.350	ENSTRUG00000003352	trnau1apa	100	77.097	Takifugu_rubripes
ENSSMAG00000020851	trnau1apa	100	76.038	ENSTNIG00000006129	trnau1apa	100	74.516	Tetraodon_nigroviridis
ENSSMAG00000020851	trnau1apa	84	52.290	ENSTBEG00000008049	-	95	49.802	Tupaia_belangeri
ENSSMAG00000020851	trnau1apa	98	57.049	ENSTTRG00000001854	TRNAU1AP	98	53.722	Tursiops_truncatus
ENSSMAG00000020851	trnau1apa	95	57.143	ENSUAMG00000008789	TRNAU1AP	99	53.691	Ursus_americanus
ENSSMAG00000020851	trnau1apa	98	57.049	ENSUMAG00000011068	TRNAU1AP	98	53.722	Ursus_maritimus
ENSSMAG00000020851	trnau1apa	98	51.125	ENSVPAG00000006778	TRNAU1AP	99	49.839	Vicugna_pacos
ENSSMAG00000020851	trnau1apa	98	56.250	ENSVVUG00000012518	TRNAU1AP	92	52.922	Vulpes_vulpes
ENSSMAG00000020851	trnau1apa	99	75.728	ENSXMAG00000017361	trnau1apa	99	77.346	Xiphophorus_maculatus