EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000020886 (Gene tree)
Gene ID: -
Gene Symbol: zgc:56699
Alias: -
Full Name: zgc:56699
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4966 bases
Position: chr11:22003932-22008897
Accession: ZDB-GENE-040426-2099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000034137	zf-U11-48K	PF05253.12	1.1e-19	1	2
ENSSMAP00000034137	zf-U11-48K	PF05253.12	1.1e-19	2	2
ENSSMAP00000034139	zf-U11-48K	PF05253.12	1.1e-19	1	2
ENSSMAP00000034139	zf-U11-48K	PF05253.12	1.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000034578	-	1273	-	ENSSMAP00000034139	174 (aa)	-	A0A2U9C2G0
ENSSMAT00000034576	-	1355	-	ENSSMAP00000034137	170 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000020886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000020886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000020886	zgc:56699	95	57.396	ENSAPOG00000021951	-	97	57.396	Acanthochromis_polyacanthus
ENSSMAG00000020886	zgc:56699	83	63.265	ENSAPOG00000000311	-	85	63.265	Acanthochromis_polyacanthus
ENSSMAG00000020886	zgc:56699	100	62.570	ENSACIG00000013400	zgc:56699	100	62.570	Amphilophus_citrinellus
ENSSMAG00000020886	zgc:56699	95	59.412	ENSAOCG00000013650	-	97	59.412	Amphiprion_ocellaris
ENSSMAG00000020886	zgc:56699	95	49.398	ENSAPEG00000006689	zgc:56699	95	49.398	Amphiprion_percula
ENSSMAG00000020886	zgc:56699	99	69.101	ENSATEG00000024058	zgc:56699	99	69.101	Anabas_testudineus
ENSSMAG00000020886	zgc:56699	99	63.333	ENSACLG00000023562	zgc:56699	92	63.333	Astatotilapia_calliptera
ENSSMAG00000020886	zgc:56699	83	52.258	ENSAMXG00000036095	-	65	52.258	Astyanax_mexicanus
ENSSMAG00000020886	zgc:56699	97	53.631	ENSAMXG00000038346	zgc:56699	99	53.631	Astyanax_mexicanus
ENSSMAG00000020886	zgc:56699	98	62.857	ENSCSEG00000021520	zgc:56699	83	62.857	Cynoglossus_semilaevis
ENSSMAG00000020886	zgc:56699	90	56.774	ENSCVAG00000009972	zgc:56699	83	56.774	Cyprinodon_variegatus
ENSSMAG00000020886	zgc:56699	95	49.724	ENSDARG00000000887	zgc:56699	98	49.724	Danio_rerio
ENSSMAG00000020886	zgc:56699	85	49.032	ENSDARG00000099586	CR382383.2	88	48.734	Danio_rerio
ENSSMAG00000020886	zgc:56699	66	45.763	ENSEBUG00000005577	-	63	45.378	Eptatretus_burgeri
ENSSMAG00000020886	zgc:56699	96	55.307	ENSELUG00000003242	gtsf1	98	55.307	Esox_lucius
ENSSMAG00000020886	zgc:56699	97	60.571	ENSFHEG00000006036	zgc:56699	97	53.801	Fundulus_heteroclitus
ENSSMAG00000020886	zgc:56699	84	52.778	ENSGMOG00000007295	zgc:56699	99	52.778	Gadus_morhua
ENSSMAG00000020886	zgc:56699	60	49.541	ENSGALG00000035365	-	62	49.541	Gallus_gallus
ENSSMAG00000020886	zgc:56699	95	63.953	ENSGAFG00000020743	zgc:56699	96	63.953	Gambusia_affinis
ENSSMAG00000020886	zgc:56699	99	63.333	ENSHBUG00000005327	zgc:56699	100	63.333	Haplochromis_burtoni
ENSSMAG00000020886	zgc:56699	96	48.837	ENSHCOG00000010296	-	99	48.837	Hippocampus_comes
ENSSMAG00000020886	zgc:56699	96	46.893	ENSIPUG00000011498	zgc:56699	95	46.893	Ictalurus_punctatus
ENSSMAG00000020886	zgc:56699	97	70.857	ENSLBEG00000015981	zgc:56699	100	60.947	Labrus_bergylta
ENSSMAG00000020886	zgc:56699	80	50.000	ENSLOCG00000004469	zgc:56699	97	50.355	Lepisosteus_oculatus
ENSSMAG00000020886	zgc:56699	98	65.341	ENSMAMG00000001846	zgc:56699	98	65.341	Mastacembelus_armatus
ENSSMAG00000020886	zgc:56699	99	63.333	ENSMZEG00005026479	zgc:56699	92	63.333	Maylandia_zebra
ENSSMAG00000020886	zgc:56699	99	48.913	ENSMMOG00000017331	zgc:56699	99	48.913	Mola_mola
ENSSMAG00000020886	zgc:56699	99	62.222	ENSNBRG00000006336	zgc:56699	100	62.222	Neolamprologus_brichardi
ENSSMAG00000020886	zgc:56699	99	63.889	ENSONIG00000016720	zgc:56699	92	63.889	Oreochromis_niloticus
ENSSMAG00000020886	zgc:56699	62	37.719	ENSOANG00000030381	-	74	37.719	Ornithorhynchus_anatinus
ENSSMAG00000020886	zgc:56699	100	52.247	ENSORLG00000015258	-	100	52.247	Oryzias_latipes
ENSSMAG00000020886	zgc:56699	80	61.972	ENSORLG00000025877	-	87	61.972	Oryzias_latipes
ENSSMAG00000020886	zgc:56699	80	61.972	ENSORLG00020011013	-	87	61.972	Oryzias_latipes_hni
ENSSMAG00000020886	zgc:56699	100	52.247	ENSORLG00020010990	-	100	52.247	Oryzias_latipes_hni
ENSSMAG00000020886	zgc:56699	100	52.247	ENSORLG00015004961	zgc:56699	100	52.247	Oryzias_latipes_hsok
ENSSMAG00000020886	zgc:56699	97	57.803	ENSOMEG00000021773	-	97	57.803	Oryzias_melastigma
ENSSMAG00000020886	zgc:56699	100	54.545	ENSOMEG00000021739	-	100	54.545	Oryzias_melastigma
ENSSMAG00000020886	zgc:56699	79	55.714	ENSOMEG00000013200	-	91	55.714	Oryzias_melastigma
ENSSMAG00000020886	zgc:56699	95	49.714	ENSPKIG00000017039	zgc:56699	98	49.714	Paramormyrops_kingsleyae
ENSSMAG00000020886	zgc:56699	96	63.218	ENSPMGG00000023241	zgc:56699	96	63.218	Periophthalmus_magnuspinnatus
ENSSMAG00000020886	zgc:56699	63	42.400	ENSPMAG00000009653	-	94	42.400	Petromyzon_marinus
ENSSMAG00000020886	zgc:56699	95	63.372	ENSPFOG00000009204	zgc:56699	96	63.372	Poecilia_formosa
ENSSMAG00000020886	zgc:56699	95	58.235	ENSPLAG00000009088	zgc:56699	95	58.235	Poecilia_latipinna
ENSSMAG00000020886	zgc:56699	95	63.372	ENSPMEG00000001443	zgc:56699	96	63.372	Poecilia_mexicana
ENSSMAG00000020886	zgc:56699	95	63.953	ENSPREG00000000745	zgc:56699	96	63.953	Poecilia_reticulata
ENSSMAG00000020886	zgc:56699	99	63.333	ENSPNYG00000002811	zgc:56699	100	63.333	Pundamilia_nyererei
ENSSMAG00000020886	zgc:56699	96	53.039	ENSPNAG00000005165	zgc:56699	98	53.039	Pygocentrus_nattereri
ENSSMAG00000020886	zgc:56699	98	48.889	ENSSFOG00015021600	zgc:56699	99	48.889	Scleropages_formosus
ENSSMAG00000020886	zgc:56699	99	69.274	ENSSDUG00000002033	zgc:56699	99	69.274	Seriola_dumerili
ENSSMAG00000020886	zgc:56699	99	69.274	ENSSLDG00000014113	zgc:56699	99	69.274	Seriola_lalandi_dorsalis
ENSSMAG00000020886	zgc:56699	96	64.912	ENSSPAG00000019854	-	98	64.912	Stegastes_partitus
ENSSMAG00000020886	zgc:56699	80	56.463	ENSSPAG00000010005	-	94	56.463	Stegastes_partitus
ENSSMAG00000020886	zgc:56699	98	56.180	ENSTRUG00000015537	zgc:56699	99	56.180	Takifugu_rubripes
ENSSMAG00000020886	zgc:56699	82	59.864	ENSTNIG00000012515	zgc:56699	97	59.864	Tetraodon_nigroviridis
ENSSMAG00000020886	zgc:56699	95	59.763	ENSXCOG00000014400	zgc:56699	85	59.763	Xiphophorus_couchianus
ENSSMAG00000020886	zgc:56699	95	63.743	ENSXMAG00000011692	zgc:56699	96	63.743	Xiphophorus_maculatus