EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000021090 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8085 bases
Position: chr12:8362926-8371010
Accession: ZDB-GENE-070112-1352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000034476	R3H	PF01424.22	2e-05	1	1
ENSSMAP00000034478	R3H	PF01424.22	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000034916	-	3918	-	ENSSMAP00000034476	344 (aa)	-	-
ENSSMAT00000034917	-	3862	-	ENSSMAP00000034477	381 (aa)	-	-
ENSSMAT00000034918	-	2754	-	ENSSMAP00000034478	344 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000021090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000021090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000021090	r3hdm4	68	56.904	ENSG00000198858	R3HDM4	90	57.778	Homo_sapiens
ENSSMAG00000021090	r3hdm4	68	56.904	ENSAMEG00000003001	R3HDM4	97	56.904	Ailuropoda_melanoleuca
ENSSMAG00000021090	r3hdm4	74	86.719	ENSACIG00000004672	r3hdm4	100	86.719	Amphilophus_citrinellus
ENSSMAG00000021090	r3hdm4	73	86.111	ENSATEG00000015913	r3hdm4	99	86.111	Anabas_testudineus
ENSSMAG00000021090	r3hdm4	68	56.904	ENSANAG00000029748	R3HDM4	98	56.904	Aotus_nancymaae
ENSSMAG00000021090	r3hdm4	68	56.904	ENSBTAG00000046406	R3HDM4	88	56.904	Bos_taurus
ENSSMAG00000021090	r3hdm4	68	57.322	ENSCJAG00000020114	R3HDM4	92	55.823	Callithrix_jacchus
ENSSMAG00000021090	r3hdm4	68	57.322	ENSCAFG00000019665	R3HDM4	87	57.322	Canis_familiaris
ENSSMAG00000021090	r3hdm4	68	57.741	ENSCAFG00020016880	R3HDM4	87	57.741	Canis_lupus_dingo
ENSSMAG00000021090	r3hdm4	68	57.322	ENSCHIG00000020110	R3HDM4	91	57.322	Capra_hircus
ENSSMAG00000021090	r3hdm4	68	57.741	ENSCCAG00000019955	R3HDM4	86	57.741	Cebus_capucinus
ENSSMAG00000021090	r3hdm4	68	57.261	ENSCATG00000037269	R3HDM4	89	57.261	Cercocebus_atys
ENSSMAG00000021090	r3hdm4	68	55.462	ENSCLAG00000007094	R3HDM4	97	55.462	Chinchilla_lanigera
ENSSMAG00000021090	r3hdm4	68	57.322	ENSCSAG00000012574	R3HDM4	88	57.322	Chlorocebus_sabaeus
ENSSMAG00000021090	r3hdm4	74	60.526	ENSCPBG00000009805	R3HDM4	100	60.526	Chrysemys_picta_bellii
ENSSMAG00000021090	r3hdm4	68	57.741	ENSCANG00000040439	R3HDM4	83	57.741	Colobus_angolensis_palliatus
ENSSMAG00000021090	r3hdm4	67	55.882	ENSCGRG00001021650	R3hdm4	89	55.696	Cricetulus_griseus_chok1gshd
ENSSMAG00000021090	r3hdm4	67	55.882	ENSCGRG00000013169	R3hdm4	89	55.696	Cricetulus_griseus_crigri
ENSSMAG00000021090	r3hdm4	74	78.516	ENSCSEG00000018211	r3hdm4	100	78.516	Cynoglossus_semilaevis
ENSSMAG00000021090	r3hdm4	74	84.766	ENSCVAG00000017127	r3hdm4	100	84.766	Cyprinodon_variegatus
ENSSMAG00000021090	r3hdm4	67	55.000	ENSDORG00000006605	R3hdm4	96	55.000	Dipodomys_ordii
ENSSMAG00000021090	r3hdm4	68	56.904	ENSEASG00005021556	R3HDM4	86	56.904	Equus_asinus_asinus
ENSSMAG00000021090	r3hdm4	68	56.904	ENSECAG00000000003	R3HDM4	87	56.904	Equus_caballus
ENSSMAG00000021090	r3hdm4	68	56.904	ENSFCAG00000042437	R3HDM4	88	56.904	Felis_catus
ENSSMAG00000021090	r3hdm4	68	62.128	ENSFALG00000013938	R3HDM4	97	63.136	Ficedula_albicollis
ENSSMAG00000021090	r3hdm4	68	55.649	ENSFDAG00000017040	R3HDM4	97	55.649	Fukomys_damarensis
ENSSMAG00000021090	r3hdm4	74	84.766	ENSFHEG00000017636	r3hdm4	100	84.766	Fundulus_heteroclitus
ENSSMAG00000021090	r3hdm4	70	70.248	ENSGMOG00000001231	r3hdm4	100	70.248	Gadus_morhua
ENSSMAG00000021090	r3hdm4	68	62.025	ENSGALG00000001998	R3HDM4	90	62.025	Gallus_gallus
ENSSMAG00000021090	r3hdm4	74	83.203	ENSGAFG00000004173	r3hdm4	100	83.203	Gambusia_affinis
ENSSMAG00000021090	r3hdm4	74	59.623	ENSGAGG00000019698	R3HDM4	100	59.623	Gopherus_agassizii
ENSSMAG00000021090	r3hdm4	68	56.904	ENSGGOG00000008040	R3HDM4	97	56.904	Gorilla_gorilla
ENSSMAG00000021090	r3hdm4	74	87.500	ENSHBUG00000014810	r3hdm4	100	87.500	Haplochromis_burtoni
ENSSMAG00000021090	r3hdm4	68	55.462	ENSHGLG00000016194	R3HDM4	88	55.462	Heterocephalus_glaber_female
ENSSMAG00000021090	r3hdm4	74	82.745	ENSHCOG00000008422	r3hdm4	99	82.745	Hippocampus_comes
ENSSMAG00000021090	r3hdm4	74	68.605	ENSIPUG00000006716	r3hdm4	100	68.605	Ictalurus_punctatus
ENSSMAG00000021090	r3hdm4	68	54.812	ENSSTOG00000023015	R3HDM4	97	54.393	Ictidomys_tridecemlineatus
ENSSMAG00000021090	r3hdm4	67	55.319	ENSJJAG00000012475	R3hdm4	89	55.319	Jaculus_jaculus
ENSSMAG00000021090	r3hdm4	74	82.422	ENSKMAG00000005853	r3hdm4	100	82.422	Kryptolebias_marmoratus
ENSSMAG00000021090	r3hdm4	74	87.500	ENSLBEG00000000730	r3hdm4	100	87.500	Labrus_bergylta
ENSSMAG00000021090	r3hdm4	74	59.542	ENSLACG00000016445	R3HDM4	100	59.542	Latimeria_chalumnae
ENSSMAG00000021090	r3hdm4	72	69.076	ENSLOCG00000002423	r3hdm4	100	68.321	Lepisosteus_oculatus
ENSSMAG00000021090	r3hdm4	67	56.540	ENSLAFG00000017796	R3HDM4	91	56.540	Loxodonta_africana
ENSSMAG00000021090	r3hdm4	68	57.741	ENSMFAG00000044131	R3HDM4	88	57.741	Macaca_fascicularis
ENSSMAG00000021090	r3hdm4	64	58.667	ENSMMUG00000009682	R3HDM4	90	58.667	Macaca_mulatta
ENSSMAG00000021090	r3hdm4	68	57.741	ENSMNEG00000044115	R3HDM4	96	57.741	Macaca_nemestrina
ENSSMAG00000021090	r3hdm4	67	57.563	ENSMLEG00000035693	R3HDM4	87	57.563	Mandrillus_leucophaeus
ENSSMAG00000021090	r3hdm4	65	90.583	ENSMAMG00000005652	r3hdm4	91	90.583	Mastacembelus_armatus
ENSSMAG00000021090	r3hdm4	67	54.852	ENSMAUG00000010611	R3hdm4	91	55.274	Mesocricetus_auratus
ENSSMAG00000021090	r3hdm4	68	56.485	ENSMICG00000010124	R3HDM4	88	56.485	Microcebus_murinus
ENSSMAG00000021090	r3hdm4	67	55.319	ENSMOCG00000002646	R3hdm4	89	55.319	Microtus_ochrogaster
ENSSMAG00000021090	r3hdm4	74	85.547	ENSMMOG00000008253	r3hdm4	100	85.547	Mola_mola
ENSSMAG00000021090	r3hdm4	66	58.696	ENSMODG00000005698	R3HDM4	99	58.696	Monodelphis_domestica
ENSSMAG00000021090	r3hdm4	74	86.328	ENSMALG00000018856	r3hdm4	100	86.328	Monopterus_albus
ENSSMAG00000021090	r3hdm4	67	54.701	MGP_CAROLIEiJ_G0015551	R3hdm4	89	55.128	Mus_caroli
ENSSMAG00000021090	r3hdm4	67	54.506	ENSMUSG00000035781	R3hdm4	89	54.741	Mus_musculus
ENSSMAG00000021090	r3hdm4	67	54.274	MGP_PahariEiJ_G0030964	R3hdm4	89	54.701	Mus_pahari
ENSSMAG00000021090	r3hdm4	67	54.661	MGP_SPRETEiJ_G0016369	-	75	54.894	Mus_spretus
ENSSMAG00000021090	r3hdm4	68	58.159	ENSMPUG00000009394	R3HDM4	88	58.159	Mustela_putorius_furo
ENSSMAG00000021090	r3hdm4	74	86.719	ENSNBRG00000004438	r3hdm4	100	86.719	Neolamprologus_brichardi
ENSSMAG00000021090	r3hdm4	64	53.680	ENSNLEG00000001022	R3HDM4	99	53.680	Nomascus_leucogenys
ENSSMAG00000021090	r3hdm4	68	58.051	ENSMEUG00000011020	R3HDM4	99	58.051	Notamacropus_eugenii
ENSSMAG00000021090	r3hdm4	68	55.462	ENSODEG00000011745	R3HDM4	88	55.462	Octodon_degus
ENSSMAG00000021090	r3hdm4	81	84.173	ENSONIG00000012675	r3hdm4	99	84.173	Oreochromis_niloticus
ENSSMAG00000021090	r3hdm4	74	83.203	ENSOMEG00000003005	r3hdm4	100	83.203	Oryzias_melastigma
ENSSMAG00000021090	r3hdm4	67	56.540	ENSOGAG00000025656	R3HDM4	89	56.540	Otolemur_garnettii
ENSSMAG00000021090	r3hdm4	68	56.485	ENSOARG00000009945	R3HDM4	97	56.485	Ovis_aries
ENSSMAG00000021090	r3hdm4	68	56.904	ENSPPAG00000042371	R3HDM4	97	56.904	Pan_paniscus
ENSSMAG00000021090	r3hdm4	68	57.741	ENSPANG00000015203	R3HDM4	88	57.741	Papio_anubis
ENSSMAG00000021090	r3hdm4	74	66.794	ENSPKIG00000007421	r3hdm4	100	67.939	Paramormyrops_kingsleyae
ENSSMAG00000021090	r3hdm4	74	75.097	ENSPMGG00000020467	r3hdm4	100	75.097	Periophthalmus_magnuspinnatus
ENSSMAG00000021090	r3hdm4	67	55.745	ENSPEMG00000008365	Tmem259	97	55.745	Peromyscus_maniculatus_bairdii
ENSSMAG00000021090	r3hdm4	74	81.641	ENSPFOG00000003199	r3hdm4	100	81.641	Poecilia_formosa
ENSSMAG00000021090	r3hdm4	74	81.641	ENSPMEG00000014183	r3hdm4	100	81.641	Poecilia_mexicana
ENSSMAG00000021090	r3hdm4	74	82.422	ENSPREG00000010709	r3hdm4	100	82.422	Poecilia_reticulata
ENSSMAG00000021090	r3hdm4	68	56.962	ENSPPYG00000009297	R3HDM4	88	56.962	Pongo_abelii
ENSSMAG00000021090	r3hdm4	68	57.322	ENSPCOG00000016785	R3HDM4	88	57.322	Propithecus_coquereli
ENSSMAG00000021090	r3hdm4	74	87.500	ENSPNYG00000017489	r3hdm4	100	87.500	Pundamilia_nyererei
ENSSMAG00000021090	r3hdm4	67	54.894	ENSRNOG00000011489	R3hdm4	89	54.894	Rattus_norvegicus
ENSSMAG00000021090	r3hdm4	68	57.741	ENSRROG00000028842	R3HDM4	88	57.741	Rhinopithecus_roxellana
ENSSMAG00000021090	r3hdm4	68	55.785	ENSSBOG00000019298	R3HDM4	70	56.198	Saimiri_boliviensis_boliviensis
ENSSMAG00000021090	r3hdm4	72	70.968	ENSSFOG00015020574	r3hdm4	91	70.683	Scleropages_formosus
ENSSMAG00000021090	r3hdm4	74	91.797	ENSSDUG00000008488	r3hdm4	100	91.797	Seriola_dumerili
ENSSMAG00000021090	r3hdm4	74	91.406	ENSSLDG00000025328	r3hdm4	100	91.406	Seriola_lalandi_dorsalis
ENSSMAG00000021090	r3hdm4	68	62.869	ENSSPUG00000005434	R3HDM4	95	60.606	Sphenodon_punctatus
ENSSMAG00000021090	r3hdm4	74	80.469	ENSSPAG00000002562	r3hdm4	99	80.469	Stegastes_partitus
ENSSMAG00000021090	r3hdm4	68	58.577	ENSSSCG00000013419	R3HDM4	87	58.577	Sus_scrofa
ENSSMAG00000021090	r3hdm4	58	56.796	ENSTGUG00000000663	R3HDM4	98	56.796	Taeniopygia_guttata
ENSSMAG00000021090	r3hdm4	68	55.932	ENSTTRG00000001470	R3HDM4	97	56.780	Tursiops_truncatus
ENSSMAG00000021090	r3hdm4	64	57.778	ENSUAMG00000005751	R3HDM4	100	57.778	Ursus_americanus
ENSSMAG00000021090	r3hdm4	68	57.322	ENSVVUG00000022685	R3HDM4	87	57.322	Vulpes_vulpes
ENSSMAG00000021090	r3hdm4	72	46.559	ENSXETG00000033624	R3HDM4	96	46.559	Xenopus_tropicalis
ENSSMAG00000021090	r3hdm4	74	80.934	ENSXCOG00000005127	r3hdm4	100	80.934	Xiphophorus_couchianus
ENSSMAG00000021090	r3hdm4	74	81.250	ENSXMAG00000022875	r3hdm4	100	81.250	Xiphophorus_maculatus