EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000021271 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3195 bases
Position: chr8:4354920-4358114
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000034795	zf-C2H2	PF00096.26	1e-69	1	9
ENSSMAP00000034795	zf-C2H2	PF00096.26	1e-69	2	9
ENSSMAP00000034795	zf-C2H2	PF00096.26	1e-69	3	9
ENSSMAP00000034795	zf-C2H2	PF00096.26	1e-69	4	9
ENSSMAP00000034795	zf-C2H2	PF00096.26	1e-69	5	9
ENSSMAP00000034795	zf-C2H2	PF00096.26	1e-69	6	9
ENSSMAP00000034795	zf-C2H2	PF00096.26	1e-69	7	9
ENSSMAP00000034795	zf-C2H2	PF00096.26	1e-69	8	9
ENSSMAP00000034795	zf-C2H2	PF00096.26	1e-69	9	9
ENSSMAP00000034795	zf-met	PF12874.7	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000035239	-	3195	-	ENSSMAP00000034795	1064 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000021271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000021271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000021271	-	66	35.593	ENSSMAG00000013676	-	86	35.593
ENSSMAG00000021271	-	73	37.069	ENSSMAG00000013291	-	94	43.353
ENSSMAG00000021271	-	70	40.891	ENSSMAG00000003594	-	88	40.891
ENSSMAG00000021271	-	64	52.727	ENSSMAG00000006155	-	56	52.727
ENSSMAG00000021271	-	76	30.833	ENSSMAG00000002899	znf131	52	30.714
ENSSMAG00000021271	-	66	36.970	ENSSMAG00000009020	znf526	59	35.503
ENSSMAG00000021271	-	73	33.333	ENSSMAG00000009609	-	97	41.176
ENSSMAG00000021271	-	68	45.455	ENSSMAG00000014720	e4f1	73	45.455
ENSSMAG00000021271	-	67	37.736	ENSSMAG00000013828	-	69	37.736
ENSSMAG00000021271	-	69	31.860	ENSSMAG00000015282	-	80	36.283
ENSSMAG00000021271	-	70	39.485	ENSSMAG00000009685	-	83	37.134
ENSSMAG00000021271	-	70	37.500	ENSSMAG00000007561	znf236	64	37.500
ENSSMAG00000021271	-	67	36.782	ENSSMAG00000002391	ZNF319	95	36.782
ENSSMAG00000021271	-	66	40.000	ENSSMAG00000006797	gfi1aa	52	40.000
ENSSMAG00000021271	-	65	48.750	ENSSMAG00000015356	-	85	48.750
ENSSMAG00000021271	-	66	48.980	ENSSMAG00000013663	-	99	38.908
ENSSMAG00000021271	-	57	41.667	ENSSMAG00000002798	-	68	41.667
ENSSMAG00000021271	-	61	39.744	ENSSMAG00000004429	-	98	39.726
ENSSMAG00000021271	-	66	37.168	ENSSMAG00000000056	-	62	37.168
ENSSMAG00000021271	-	66	35.347	ENSSMAG00000015041	si:dkey-7i4.5	94	35.347
ENSSMAG00000021271	-	67	41.500	ENSSMAG00000019949	-	70	41.500
ENSSMAG00000021271	-	67	35.673	ENSSMAG00000017485	-	55	38.554
ENSSMAG00000021271	-	64	32.692	ENSSMAG00000000404	-	62	34.066
ENSSMAG00000021271	-	93	41.429	ENSSMAG00000002031	-	58	41.429
ENSSMAG00000021271	-	68	36.000	ENSSMAG00000007396	-	87	32.500
ENSSMAG00000021271	-	68	33.333	ENSSMAG00000007380	znf710b	61	33.333
ENSSMAG00000021271	-	68	40.964	ENSSMAG00000009115	-	87	53.061
ENSSMAG00000021271	-	66	45.810	ENSSMAG00000021251	-	90	45.810
ENSSMAG00000021271	-	66	44.928	ENSSMAG00000006197	-	94	43.750
ENSSMAG00000021271	-	70	50.000	ENSSMAG00000014844	-	84	50.000
ENSSMAG00000021271	-	67	34.211	ENSSMAG00000004252	-	90	34.211
ENSSMAG00000021271	-	67	31.250	ENSSMAG00000014597	-	60	37.273
ENSSMAG00000021271	-	78	39.535	ENSSMAG00000005081	-	82	39.535
ENSSMAG00000021271	-	67	43.243	ENSSMAG00000017045	-	58	43.243
ENSSMAG00000021271	-	65	44.578	ENSSMAG00000004259	-	78	44.578
ENSSMAG00000021271	-	63	36.364	ENSSMAG00000020844	patz1	64	36.364
ENSSMAG00000021271	-	68	34.021	ENSSMAG00000012378	znf646	98	34.021
ENSSMAG00000021271	-	68	32.840	ENSSMAG00000018844	prdm5	82	33.913
ENSSMAG00000021271	-	55	40.449	ENSSMAG00000019364	snai2	60	40.449
ENSSMAG00000021271	-	66	30.216	ENSSMAG00000019980	-	63	31.298
ENSSMAG00000021271	-	60	40.458	ENSSMAG00000006825	-	80	40.458
ENSSMAG00000021271	-	66	39.175	ENSSMAG00000008308	-	80	39.175
ENSSMAG00000021271	-	76	35.041	ENSSMAG00000015347	-	92	35.041
ENSSMAG00000021271	-	67	43.814	ENSSMAG00000005076	-	99	44.828
ENSSMAG00000021271	-	57	37.500	ENSSMAG00000015181	gfi1b	59	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000021271	-	97	73.152	ENSAOCG00000013656	-	99	72.100	Amphiprion_ocellaris
ENSSMAG00000021271	-	66	57.273	ENSHCOG00000000800	-	85	57.273	Hippocampus_comes
ENSSMAG00000021271	-	82	41.519	ENSKMAG00000007892	-	71	53.499	Kryptolebias_marmoratus
ENSSMAG00000021271	-	73	71.724	ENSLBEG00000005715	-	89	71.724	Labrus_bergylta
ENSSMAG00000021271	-	93	58.621	ENSOMEG00000021903	-	99	52.712	Oryzias_melastigma
ENSSMAG00000021271	-	62	53.846	ENSPMEG00000019463	-	95	55.000	Poecilia_mexicana
ENSSMAG00000021271	-	96	77.379	ENSSDUG00000016450	-	100	76.050	Seriola_dumerili
ENSSMAG00000021271	-	94	60.423	ENSSPAG00000023063	-	99	65.435	Stegastes_partitus
ENSSMAG00000021271	-	97	65.837	ENSTRUG00000022843	-	97	65.982	Takifugu_rubripes