EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000021348 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3243 bases
Position: chr5:10219715-10222957
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000034929	RRM_1	PF00076.22	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000035374	PABPN1L-201	804	-	ENSSMAP00000034929	267 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000021348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000021348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000021348	PABPN1L	77	53.953	ENSSMAG00000020157	pabpn1	65	60.127

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000021348	PABPN1L	72	51.942	ENSG00000205022	PABPN1L	59	55.215	Homo_sapiens
ENSSMAG00000021348	PABPN1L	91	89.796	ENSAPOG00000000685	PABPN1L	78	88.163	Acanthochromis_polyacanthus
ENSSMAG00000021348	PABPN1L	91	83.471	ENSACIG00000021400	PABPN1L	98	81.818	Amphilophus_citrinellus
ENSSMAG00000021348	PABPN1L	100	88.848	ENSAOCG00000019844	PABPN1L	100	88.848	Amphiprion_ocellaris
ENSSMAG00000021348	PABPN1L	100	88.476	ENSAPEG00000019534	PABPN1L	100	88.476	Amphiprion_percula
ENSSMAG00000021348	PABPN1L	91	90.123	ENSATEG00000011646	PABPN1L	95	89.300	Anabas_testudineus
ENSSMAG00000021348	PABPN1L	67	58.333	ENSACAG00000013250	PABPN1L	74	62.238	Anolis_carolinensis
ENSSMAG00000021348	PABPN1L	72	52.709	ENSANAG00000038178	PABPN1L	59	55.280	Aotus_nancymaae
ENSSMAG00000021348	PABPN1L	100	88.390	ENSACLG00000025147	PABPN1L	100	87.266	Astatotilapia_calliptera
ENSSMAG00000021348	PABPN1L	54	71.329	ENSAMXG00000010873	PABPN1L	55	69.930	Astyanax_mexicanus
ENSSMAG00000021348	PABPN1L	61	46.951	ENSBTAG00000023752	-	62	44.379	Bos_taurus
ENSSMAG00000021348	PABPN1L	72	52.284	ENSCJAG00000045284	PABPN1L	60	54.268	Callithrix_jacchus
ENSSMAG00000021348	PABPN1L	72	52.709	ENSCCAG00000027631	PABPN1L	59	53.704	Cebus_capucinus
ENSSMAG00000021348	PABPN1L	72	51.456	ENSCATG00000031060	PABPN1L	59	54.268	Cercocebus_atys
ENSSMAG00000021348	PABPN1L	57	52.564	ENSCLAG00000000704	PABPN1L	64	46.857	Chinchilla_lanigera
ENSSMAG00000021348	PABPN1L	73	48.768	ENSCGRG00001013211	Pabpn1l	56	55.844	Cricetulus_griseus_chok1gshd
ENSSMAG00000021348	PABPN1L	73	48.768	ENSCGRG00000015868	Pabpn1l	56	55.844	Cricetulus_griseus_crigri
ENSSMAG00000021348	PABPN1L	100	81.648	ENSCSEG00000001142	pabpn1l	100	83.521	Cynoglossus_semilaevis
ENSSMAG00000021348	PABPN1L	100	81.041	ENSCVAG00000015547	PABPN1L	100	83.271	Cyprinodon_variegatus
ENSSMAG00000021348	PABPN1L	57	52.980	ENSDNOG00000034677	PABPN1L	57	53.333	Dasypus_novemcinctus
ENSSMAG00000021348	PABPN1L	69	47.525	ENSEASG00005000777	PABPN1L	61	50.000	Equus_asinus_asinus
ENSSMAG00000021348	PABPN1L	95	67.451	ENSELUG00000018385	PABPN1L	95	66.275	Esox_lucius
ENSSMAG00000021348	PABPN1L	61	51.429	ENSFCAG00000010465	PABPN1L	59	49.704	Felis_catus
ENSSMAG00000021348	PABPN1L	64	55.738	ENSFALG00000003319	PABPN1L	61	57.333	Ficedula_albicollis
ENSSMAG00000021348	PABPN1L	57	54.777	ENSFDAG00000021067	PABPN1L	60	50.307	Fukomys_damarensis
ENSSMAG00000021348	PABPN1L	100	82.463	ENSFHEG00000018295	PABPN1L	100	82.090	Fundulus_heteroclitus
ENSSMAG00000021348	PABPN1L	100	74.632	ENSGMOG00000001475	PABPN1L	100	72.059	Gadus_morhua
ENSSMAG00000021348	PABPN1L	51	61.765	ENSGALG00000006242	PABPN1L	66	60.684	Gallus_gallus
ENSSMAG00000021348	PABPN1L	100	81.041	ENSGAFG00000012565	PABPN1L	100	83.271	Gambusia_affinis
ENSSMAG00000021348	PABPN1L	100	80.586	ENSGACG00000015428	PABPN1L	100	82.418	Gasterosteus_aculeatus
ENSSMAG00000021348	PABPN1L	72	51.942	ENSGGOG00000012670	PABPN1L	59	54.878	Gorilla_gorilla
ENSSMAG00000021348	PABPN1L	100	88.060	ENSHBUG00000002388	PABPN1L	100	86.194	Haplochromis_burtoni
ENSSMAG00000021348	PABPN1L	100	82.482	ENSHCOG00000004151	PABPN1L	99	81.752	Hippocampus_comes
ENSSMAG00000021348	PABPN1L	67	62.921	ENSIPUG00000023583	PABPN1L	87	62.921	Ictalurus_punctatus
ENSSMAG00000021348	PABPN1L	73	47.475	ENSJJAG00000006433	Pabpn1l	59	50.943	Jaculus_jaculus
ENSSMAG00000021348	PABPN1L	82	82.273	ENSKMAG00000001112	PABPN1L	94	85.321	Kryptolebias_marmoratus
ENSSMAG00000021348	PABPN1L	100	89.591	ENSLBEG00000011647	PABPN1L	97	86.245	Labrus_bergylta
ENSSMAG00000021348	PABPN1L	72	51.456	ENSMFAG00000002924	PABPN1L	59	54.268	Macaca_fascicularis
ENSSMAG00000021348	PABPN1L	72	51.707	ENSMMUG00000012438	PABPN1L	59	53.704	Macaca_mulatta
ENSSMAG00000021348	PABPN1L	72	51.456	ENSMNEG00000044808	PABPN1L	59	54.268	Macaca_nemestrina
ENSSMAG00000021348	PABPN1L	72	51.456	ENSMLEG00000032667	PABPN1L	59	54.268	Mandrillus_leucophaeus
ENSSMAG00000021348	PABPN1L	100	88.390	ENSMZEG00005002186	PABPN1L	100	87.266	Maylandia_zebra
ENSSMAG00000021348	PABPN1L	73	47.264	ENSMAUG00000014032	Pabpn1l	55	55.034	Mesocricetus_auratus
ENSSMAG00000021348	PABPN1L	72	49.515	ENSMICG00000028179	PABPN1L	59	50.307	Microcebus_murinus
ENSSMAG00000021348	PABPN1L	67	49.189	ENSMOCG00000007955	Pabpn1l	57	52.288	Microtus_ochrogaster
ENSSMAG00000021348	PABPN1L	76	86.207	ENSMMOG00000017714	PABPN1L	86	89.163	Mola_mola
ENSSMAG00000021348	PABPN1L	100	84.701	ENSMALG00000016926	PABPN1L	100	85.448	Monopterus_albus
ENSSMAG00000021348	PABPN1L	90	88.017	ENSNBRG00000017078	PABPN1L	100	85.950	Neolamprologus_brichardi
ENSSMAG00000021348	PABPN1L	60	52.663	ENSOPRG00000005597	PABPN1L	60	50.920	Ochotona_princeps
ENSSMAG00000021348	PABPN1L	60	56.522	ENSOANG00000013901	PABPN1L	54	57.343	Ornithorhynchus_anatinus
ENSSMAG00000021348	PABPN1L	100	79.478	ENSORLG00000026560	PABPN1L	100	77.612	Oryzias_latipes
ENSSMAG00000021348	PABPN1L	100	79.478	ENSORLG00020015068	PABPN1L	100	77.612	Oryzias_latipes_hni
ENSSMAG00000021348	PABPN1L	100	79.478	ENSORLG00015000397	PABPN1L	100	77.612	Oryzias_latipes_hsok
ENSSMAG00000021348	PABPN1L	100	79.554	ENSOMEG00000017896	PABPN1L	72	78.439	Oryzias_melastigma
ENSSMAG00000021348	PABPN1L	72	51.942	ENSPPAG00000028866	PABPN1L	59	55.215	Pan_paniscus
ENSSMAG00000021348	PABPN1L	61	51.429	ENSPPRG00000015106	PABPN1L	59	49.112	Panthera_pardus
ENSSMAG00000021348	PABPN1L	64	53.529	ENSPTIG00000015606	PABPN1L	61	52.532	Panthera_tigris_altaica
ENSSMAG00000021348	PABPN1L	72	51.942	ENSPTRG00000031120	PABPN1L	59	55.215	Pan_troglodytes
ENSSMAG00000021348	PABPN1L	72	50.481	ENSPANG00000026039	PABPN1L	59	54.268	Papio_anubis
ENSSMAG00000021348	PABPN1L	63	61.047	ENSPSIG00000003404	PABPN1L	76	60.417	Pelodiscus_sinensis
ENSSMAG00000021348	PABPN1L	82	85.780	ENSPMGG00000013927	PABPN1L	94	84.404	Periophthalmus_magnuspinnatus
ENSSMAG00000021348	PABPN1L	51	58.993	ENSPCIG00000007038	-	67	69.072	Phascolarctos_cinereus
ENSSMAG00000021348	PABPN1L	100	81.041	ENSPFOG00000007001	PABPN1L	100	83.271	Poecilia_formosa
ENSSMAG00000021348	PABPN1L	100	81.041	ENSPLAG00000018431	PABPN1L	100	83.271	Poecilia_latipinna
ENSSMAG00000021348	PABPN1L	100	81.041	ENSPMEG00000009108	PABPN1L	100	83.271	Poecilia_mexicana
ENSSMAG00000021348	PABPN1L	69	76.190	ENSPMEG00000000169	-	91	78.307	Poecilia_mexicana
ENSSMAG00000021348	PABPN1L	83	83.710	ENSPREG00000022533	PABPN1L	92	86.697	Poecilia_reticulata
ENSSMAG00000021348	PABPN1L	72	50.971	ENSPPYG00000007655	PABPN1L	58	54.268	Pongo_abelii
ENSSMAG00000021348	PABPN1L	72	50.485	ENSPVAG00000002716	PABPN1L	59	51.220	Pteropus_vampyrus
ENSSMAG00000021348	PABPN1L	100	88.390	ENSPNYG00000004803	PABPN1L	100	87.266	Pundamilia_nyererei
ENSSMAG00000021348	PABPN1L	72	47.761	ENSRNOG00000029558	Pabpn1l	56	54.967	Rattus_norvegicus
ENSSMAG00000021348	PABPN1L	72	50.725	ENSRBIG00000030740	PABPN1L	59	53.049	Rhinopithecus_bieti
ENSSMAG00000021348	PABPN1L	72	50.725	ENSRROG00000032240	-	59	53.049	Rhinopithecus_roxellana
ENSSMAG00000021348	PABPN1L	72	51.456	ENSRROG00000035483	-	59	53.659	Rhinopithecus_roxellana
ENSSMAG00000021348	PABPN1L	72	52.941	ENSSBOG00000018410	PABPN1L	59	53.049	Saimiri_boliviensis_boliviensis
ENSSMAG00000021348	PABPN1L	100	88.848	ENSSDUG00000006986	PABPN1L	100	88.848	Seriola_dumerili
ENSSMAG00000021348	PABPN1L	100	89.219	ENSSLDG00000021845	PABPN1L	100	89.219	Seriola_lalandi_dorsalis
ENSSMAG00000021348	PABPN1L	61	60.116	ENSSPUG00000007031	PABPN1L	63	60.140	Sphenodon_punctatus
ENSSMAG00000021348	PABPN1L	100	90.335	ENSSPAG00000017978	PABPN1L	100	88.104	Stegastes_partitus
ENSSMAG00000021348	PABPN1L	61	51.479	ENSSSCG00000036367	PABPN1L	58	50.307	Sus_scrofa
ENSSMAG00000021348	PABPN1L	100	75.373	ENSTRUG00000024725	PABPN1L	100	76.119	Takifugu_rubripes
ENSSMAG00000021348	PABPN1L	74	87.310	ENSTNIG00000009416	PABPN1L	100	89.848	Tetraodon_nigroviridis
ENSSMAG00000021348	PABPN1L	63	51.630	ENSXETG00000011258	pabpn1l	82	49.457	Xenopus_tropicalis
ENSSMAG00000021348	PABPN1L	79	83.491	ENSXCOG00000003254	PABPN1L	92	86.239	Xiphophorus_couchianus
ENSSMAG00000021348	PABPN1L	82	79.817	ENSXMAG00000029090	PABPN1L	94	82.569	Xiphophorus_maculatus