EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000000162 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 79509 bases
Position: chrKK581349.1:95126-174634
Accession: 103369374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000000169	PPR	PF01535.20	9.2e-32	1	5
ENSSPAP00000000169	PPR	PF01535.20	9.2e-32	2	5
ENSSPAP00000000169	PPR	PF01535.20	9.2e-32	3	5
ENSSPAP00000000169	PPR	PF01535.20	9.2e-32	4	5
ENSSPAP00000000169	PPR	PF01535.20	9.2e-32	5	5
ENSSPAP00000000186	PPR	PF01535.20	9.2e-32	1	5
ENSSPAP00000000186	PPR	PF01535.20	9.2e-32	2	5
ENSSPAP00000000186	PPR	PF01535.20	9.2e-32	3	5
ENSSPAP00000000186	PPR	PF01535.20	9.2e-32	4	5
ENSSPAP00000000186	PPR	PF01535.20	9.2e-32	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000000174	-	4818	XM_008298079	ENSSPAP00000000169	1442 (aa)	XP_008296301	UPI00049734EC
ENSSPAT00000000191	-	4818	-	ENSSPAP00000000186	1442 (aa)	-	UPI00049734EC

Gene Model

Click here to download ENSSPAG00000000162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000000162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000000162	lrpprc	100	69.737	ENSAPOG00000016610	lrpprc	100	69.406	Acanthochromis_polyacanthus
ENSSPAG00000000162	lrpprc	96	48.111	ENSAMEG00000005852	LRPPRC	99	47.826	Ailuropoda_melanoleuca
ENSSPAG00000000162	lrpprc	100	64.449	ENSACIG00000009604	lrpprc	99	64.449	Amphilophus_citrinellus
ENSSPAG00000000162	lrpprc	100	70.519	ENSAOCG00000005886	lrpprc	100	70.511	Amphiprion_ocellaris
ENSSPAG00000000162	lrpprc	97	74.951	ENSAPEG00000002937	lrpprc	100	74.951	Amphiprion_percula
ENSSPAG00000000162	lrpprc	92	67.969	ENSATEG00000010555	lrpprc	99	66.985	Anabas_testudineus
ENSSPAG00000000162	lrpprc	95	52.111	ENSACAG00000029278	LRPPRC	99	50.692	Anolis_carolinensis
ENSSPAG00000000162	lrpprc	99	48.233	ENSANAG00000027440	LRPPRC	97	54.511	Aotus_nancymaae
ENSSPAG00000000162	lrpprc	96	62.168	ENSACLG00000023712	lrpprc	92	74.841	Astatotilapia_calliptera
ENSSPAG00000000162	lrpprc	99	47.850	ENSCJAG00000000794	LRPPRC	97	54.135	Callithrix_jacchus
ENSSPAG00000000162	lrpprc	97	48.373	ENSCHIG00000020173	LRPPRC	99	48.387	Capra_hircus
ENSSPAG00000000162	lrpprc	91	42.300	ENSCAPG00000013631	LRPPRC	97	42.300	Cavia_aperea
ENSSPAG00000000162	lrpprc	86	46.613	ENSCPOG00000000204	LRPPRC	99	46.613	Cavia_porcellus
ENSSPAG00000000162	lrpprc	99	47.471	ENSCCAG00000031900	LRPPRC	97	53.283	Cebus_capucinus
ENSSPAG00000000162	lrpprc	99	47.675	ENSCATG00000014187	LRPPRC	97	54.064	Cercocebus_atys
ENSSPAG00000000162	lrpprc	99	46.616	ENSCLAG00000005203	LRPPRC	99	46.377	Chinchilla_lanigera
ENSSPAG00000000162	lrpprc	99	48.092	ENSCSAG00000013233	LRPPRC	99	48.125	Chlorocebus_sabaeus
ENSSPAG00000000162	lrpprc	83	47.624	ENSCHOG00000003631	LRPPRC	84	47.624	Choloepus_hoffmanni
ENSSPAG00000000162	lrpprc	95	47.626	ENSCANG00000034961	LRPPRC	99	68.421	Colobus_angolensis_palliatus
ENSSPAG00000000162	lrpprc	99	47.569	ENSCGRG00001016261	Lrpprc	99	47.431	Cricetulus_griseus_chok1gshd
ENSSPAG00000000162	lrpprc	99	47.569	ENSCGRG00000004072	Lrpprc	99	47.431	Cricetulus_griseus_crigri
ENSSPAG00000000162	lrpprc	100	47.678	ENSCSEG00000003850	lrpprc	96	54.688	Cynoglossus_semilaevis
ENSSPAG00000000162	lrpprc	100	67.614	ENSCVAG00000012967	lrpprc	100	67.059	Cyprinodon_variegatus
ENSSPAG00000000162	lrpprc	99	54.339	ENSDARG00000043970	lrpprc	98	54.270	Danio_rerio
ENSSPAG00000000162	lrpprc	99	47.895	ENSDNOG00000012594	-	99	47.895	Dasypus_novemcinctus
ENSSPAG00000000162	lrpprc	78	38.747	ENSDNOG00000032336	-	95	38.570	Dasypus_novemcinctus
ENSSPAG00000000162	lrpprc	95	48.483	ENSDORG00000012233	Lrpprc	99	47.368	Dipodomys_ordii
ENSSPAG00000000162	lrpprc	99	48.340	ENSETEG00000006657	LRPPRC	99	48.202	Echinops_telfairi
ENSSPAG00000000162	lrpprc	73	53.171	ENSEEUG00000012340	LRPPRC	81	53.171	Erinaceus_europaeus
ENSSPAG00000000162	lrpprc	95	59.327	ENSELUG00000012803	lrpprc	95	59.327	Esox_lucius
ENSSPAG00000000162	lrpprc	99	48.581	ENSFCAG00000013468	LRPPRC	99	48.721	Felis_catus
ENSSPAG00000000162	lrpprc	95	46.300	ENSFALG00000012738	LRPPRC	99	46.300	Ficedula_albicollis
ENSSPAG00000000162	lrpprc	99	45.868	ENSFDAG00000015328	LRPPRC	99	45.555	Fukomys_damarensis
ENSSPAG00000000162	lrpprc	100	65.696	ENSFHEG00000019604	lrpprc	100	65.281	Fundulus_heteroclitus
ENSSPAG00000000162	lrpprc	99	58.060	ENSGMOG00000008337	lrpprc	99	57.869	Gadus_morhua
ENSSPAG00000000162	lrpprc	100	65.811	ENSGAFG00000001455	lrpprc	100	65.534	Gambusia_affinis
ENSSPAG00000000162	lrpprc	99	63.322	ENSGACG00000010679	lrpprc	99	64.317	Gasterosteus_aculeatus
ENSSPAG00000000162	lrpprc	100	68.399	ENSHBUG00000000393	lrpprc	98	68.330	Haplochromis_burtoni
ENSSPAG00000000162	lrpprc	99	46.460	ENSHGLG00000006123	LRPPRC	99	46.254	Heterocephalus_glaber_female
ENSSPAG00000000162	lrpprc	60	45.224	ENSHGLG00100005960	-	99	44.879	Heterocephalus_glaber_male
ENSSPAG00000000162	lrpprc	97	63.915	ENSHCOG00000002107	lrpprc	100	63.915	Hippocampus_comes
ENSSPAG00000000162	lrpprc	99	58.766	ENSIPUG00000009406	lrpprc	99	58.559	Ictalurus_punctatus
ENSSPAG00000000162	lrpprc	99	46.717	ENSSTOG00000011185	LRPPRC	99	46.860	Ictidomys_tridecemlineatus
ENSSPAG00000000162	lrpprc	95	48.467	ENSJJAG00000020475	Lrpprc	99	47.401	Jaculus_jaculus
ENSSPAG00000000162	lrpprc	99	59.564	ENSKMAG00000003287	lrpprc	85	59.522	Kryptolebias_marmoratus
ENSSPAG00000000162	lrpprc	100	59.170	ENSLBEG00000023225	lrpprc	98	67.614	Labrus_bergylta
ENSSPAG00000000162	lrpprc	100	53.187	ENSLACG00000014030	LRPPRC	100	53.086	Latimeria_chalumnae
ENSSPAG00000000162	lrpprc	98	56.845	ENSLOCG00000016390	lrpprc	97	56.836	Lepisosteus_oculatus
ENSSPAG00000000162	lrpprc	99	46.175	ENSLAFG00000008614	LRPPRC	99	46.191	Loxodonta_africana
ENSSPAG00000000162	lrpprc	99	47.883	ENSMFAG00000041560	LRPPRC	99	73.301	Macaca_fascicularis
ENSSPAG00000000162	lrpprc	95	48.268	ENSMMUG00000019841	LRPPRC	99	73.301	Macaca_mulatta
ENSSPAG00000000162	lrpprc	97	51.328	ENSMNEG00000031613	LRPPRC	97	53.686	Macaca_nemestrina
ENSSPAG00000000162	lrpprc	98	57.323	ENSMAMG00000021835	lrpprc	98	57.371	Mastacembelus_armatus
ENSSPAG00000000162	lrpprc	100	68.538	ENSMZEG00005027379	lrpprc	99	68.468	Maylandia_zebra
ENSSPAG00000000162	lrpprc	99	47.438	ENSMAUG00000012118	Lrpprc	99	47.845	Mesocricetus_auratus
ENSSPAG00000000162	lrpprc	99	47.678	ENSMICG00000010486	LRPPRC	97	53.774	Microcebus_murinus
ENSSPAG00000000162	lrpprc	99	48.403	ENSMOCG00000006048	Lrpprc	99	48.264	Microtus_ochrogaster
ENSSPAG00000000162	lrpprc	100	61.026	ENSMMOG00000007830	lrpprc	94	70.196	Mola_mola
ENSSPAG00000000162	lrpprc	95	48.041	ENSMODG00000000648	LRPPRC	99	47.716	Monodelphis_domestica
ENSSPAG00000000162	lrpprc	100	62.586	ENSMALG00000001271	lrpprc	99	62.586	Monopterus_albus
ENSSPAG00000000162	lrpprc	95	49.599	ENSMPUG00000011800	LRPPRC	99	49.196	Mustela_putorius_furo
ENSSPAG00000000162	lrpprc	99	47.826	ENSMLUG00000010575	LRPPRC	99	47.964	Myotis_lucifugus
ENSSPAG00000000162	lrpprc	99	47.120	ENSNGAG00000013069	Lrpprc	99	46.842	Nannospalax_galili
ENSSPAG00000000162	lrpprc	92	72.158	ENSNBRG00000013202	lrpprc	92	73.150	Neolamprologus_brichardi
ENSSPAG00000000162	lrpprc	99	46.436	ENSNLEG00000016782	LRPPRC	96	53.396	Nomascus_leucogenys
ENSSPAG00000000162	lrpprc	89	42.987	ENSOPRG00000016774	LRPPRC	92	42.739	Ochotona_princeps
ENSSPAG00000000162	lrpprc	95	47.867	ENSODEG00000011211	LRPPRC	99	47.018	Octodon_degus
ENSSPAG00000000162	lrpprc	100	68.538	ENSONIG00000000917	lrpprc	100	67.060	Oreochromis_niloticus
ENSSPAG00000000162	lrpprc	74	42.588	ENSOANG00000014670	-	100	42.337	Ornithorhynchus_anatinus
ENSSPAG00000000162	lrpprc	99	48.447	ENSOCUG00000015046	LRPPRC	96	48.171	Oryctolagus_cuniculus
ENSSPAG00000000162	lrpprc	100	62.448	ENSORLG00000004605	lrpprc	99	60.029	Oryzias_latipes
ENSSPAG00000000162	lrpprc	91	65.049	ENSORLG00020012536	lrpprc	99	64.135	Oryzias_latipes_hni
ENSSPAG00000000162	lrpprc	98	71.150	ENSORLG00015018270	lrpprc	100	71.150	Oryzias_latipes_hsok
ENSSPAG00000000162	lrpprc	99	47.270	ENSOGAG00000012798	LRPPRC	99	47.441	Otolemur_garnettii
ENSSPAG00000000162	lrpprc	95	48.944	ENSOARG00000006522	LRPPRC	99	47.997	Ovis_aries
ENSSPAG00000000162	lrpprc	95	47.084	ENSPPAG00000040876	LRPPRC	97	54.034	Pan_paniscus
ENSSPAG00000000162	lrpprc	95	49.567	ENSPPRG00000006578	LRPPRC	99	48.548	Panthera_pardus
ENSSPAG00000000162	lrpprc	95	49.675	ENSPTIG00000000933	LRPPRC	97	49.459	Panthera_tigris_altaica
ENSSPAG00000000162	lrpprc	99	47.189	ENSPTRG00000011880	LRPPRC	97	53.774	Pan_troglodytes
ENSSPAG00000000162	lrpprc	99	47.678	ENSPANG00000020731	LRPPRC	97	53.686	Papio_anubis
ENSSPAG00000000162	lrpprc	89	58.482	ENSPKIG00000022232	lrpprc	97	55.233	Paramormyrops_kingsleyae
ENSSPAG00000000162	lrpprc	61	49.495	ENSPSIG00000006830	-	99	49.384	Pelodiscus_sinensis
ENSSPAG00000000162	lrpprc	67	56.584	ENSPMGG00000016597	lrpprc	97	56.526	Periophthalmus_magnuspinnatus
ENSSPAG00000000162	lrpprc	93	42.328	ENSPMAG00000002147	lrpprc	99	42.308	Petromyzon_marinus
ENSSPAG00000000162	lrpprc	99	65.021	ENSPFOG00000011227	lrpprc	99	65.021	Poecilia_formosa
ENSSPAG00000000162	lrpprc	99	64.812	ENSPLAG00000004018	lrpprc	99	64.812	Poecilia_latipinna
ENSSPAG00000000162	lrpprc	99	64.951	ENSPMEG00000016425	lrpprc	99	64.951	Poecilia_mexicana
ENSSPAG00000000162	lrpprc	99	64.990	ENSPREG00000003662	lrpprc	99	64.759	Poecilia_reticulata
ENSSPAG00000000162	lrpprc	57	43.855	ENSPPYG00000029532	-	99	43.494	Pongo_abelii
ENSSPAG00000000162	lrpprc	76	53.772	ENSPCAG00000001430	LRPPRC	79	53.905	Procavia_capensis
ENSSPAG00000000162	lrpprc	99	46.255	ENSPVAG00000002007	LRPPRC	99	46.255	Pteropus_vampyrus
ENSSPAG00000000162	lrpprc	100	60.357	ENSPNYG00000000756	lrpprc	89	73.134	Pundamilia_nyererei
ENSSPAG00000000162	lrpprc	99	59.959	ENSPNAG00000002895	lrpprc	99	59.545	Pygocentrus_nattereri
ENSSPAG00000000162	lrpprc	99	47.263	ENSRNOG00000005877	Lrpprc	99	47.543	Rattus_norvegicus
ENSSPAG00000000162	lrpprc	99	47.238	ENSRBIG00000031552	LRPPRC	99	47.270	Rhinopithecus_bieti
ENSSPAG00000000162	lrpprc	99	47.817	ENSSBOG00000011807	LRPPRC	97	53.947	Saimiri_boliviensis_boliviensis
ENSSPAG00000000162	lrpprc	95	47.311	ENSSHAG00000018725	LRPPRC	99	47.311	Sarcophilus_harrisii
ENSSPAG00000000162	lrpprc	99	51.243	ENSSFOG00015001042	lrpprc	99	51.314	Scleropages_formosus
ENSSPAG00000000162	lrpprc	100	67.244	ENSSDUG00000019062	lrpprc	99	67.105	Seriola_dumerili
ENSSPAG00000000162	lrpprc	100	62.376	ENSSLDG00000023028	lrpprc	100	63.696	Seriola_lalandi_dorsalis
ENSSPAG00000000162	lrpprc	90	46.030	ENSSARG00000000426	LRPPRC	99	46.030	Sorex_araneus
ENSSPAG00000000162	lrpprc	99	47.922	ENSSSCG00000008452	LRPPRC	99	47.922	Sus_scrofa
ENSSPAG00000000162	lrpprc	93	45.938	ENSTGUG00000003759	LRPPRC	99	45.864	Taeniopygia_guttata
ENSSPAG00000000162	lrpprc	91	63.671	ENSTRUG00000008409	lrpprc	96	63.595	Takifugu_rubripes
ENSSPAG00000000162	lrpprc	99	61.859	ENSTNIG00000007470	lrpprc	100	61.880	Tetraodon_nigroviridis
ENSSPAG00000000162	lrpprc	99	46.330	ENSTTRG00000006403	LRPPRC	99	46.607	Tursiops_truncatus
ENSSPAG00000000162	lrpprc	94	45.918	ENSVPAG00000008993	LRPPRC	99	45.885	Vicugna_pacos
ENSSPAG00000000162	lrpprc	99	51.177	ENSXETG00000009296	lrpprc	99	51.454	Xenopus_tropicalis
ENSSPAG00000000162	lrpprc	99	60.662	ENSXCOG00000013343	lrpprc	96	63.424	Xiphophorus_couchianus
ENSSPAG00000000162	lrpprc	99	65.618	ENSXMAG00000018108	lrpprc	99	65.205	Xiphophorus_maculatus