EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000000338 (Gene tree)
Gene ID: 103357670
Gene Symbol: smndc1
Alias: TDRD10|spf30|wu:fb37h07|wu:fc23a07
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 4543 bases
Position: chrKK580338.1:36019-40561
Accession: 103357670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000000427	SMN	PF06003.12	7.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000000435	-	1423	XM_008282327	ENSSPAP00000000427	238 (aa)	XP_008280549	UPI0004969B40

Gene Model

Click here to download ENSSPAG00000000338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000000338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000000338	smndc1	100	74.790	ENSG00000119953	SMNDC1	100	74.790	Homo_sapiens
ENSSPAG00000000338	smndc1	100	94.958	ENSAPOG00000021772	smndc1	100	94.958	Acanthochromis_polyacanthus
ENSSPAG00000000338	smndc1	100	74.370	ENSAMEG00000005251	SMNDC1	100	74.370	Ailuropoda_melanoleuca
ENSSPAG00000000338	smndc1	100	91.176	ENSACIG00000004819	smndc1	100	91.176	Amphilophus_citrinellus
ENSSPAG00000000338	smndc1	100	93.697	ENSAOCG00000017869	smndc1	100	93.697	Amphiprion_ocellaris
ENSSPAG00000000338	smndc1	100	93.697	ENSAPEG00000007752	smndc1	100	93.697	Amphiprion_percula
ENSSPAG00000000338	smndc1	100	91.176	ENSATEG00000006830	smndc1	100	91.176	Anabas_testudineus
ENSSPAG00000000338	smndc1	83	74.747	ENSAPLG00000004322	SMNDC1	100	74.747	Anas_platyrhynchos
ENSSPAG00000000338	smndc1	100	75.630	ENSACAG00000005983	SMNDC1	100	75.630	Anolis_carolinensis
ENSSPAG00000000338	smndc1	100	74.370	ENSANAG00000032875	SMNDC1	100	74.370	Aotus_nancymaae
ENSSPAG00000000338	smndc1	100	90.336	ENSACLG00000016360	smndc1	100	90.336	Astatotilapia_calliptera
ENSSPAG00000000338	smndc1	100	81.513	ENSAMXG00000020310	smndc1	100	81.513	Astyanax_mexicanus
ENSSPAG00000000338	smndc1	100	74.370	ENSBTAG00000000551	SMNDC1	100	74.370	Bos_taurus
ENSSPAG00000000338	smndc1	100	74.370	ENSCJAG00000018624	SMNDC1	100	74.370	Callithrix_jacchus
ENSSPAG00000000338	smndc1	100	74.370	ENSCAFG00000010720	SMNDC1	100	74.370	Canis_familiaris
ENSSPAG00000000338	smndc1	100	74.370	ENSCAFG00020011913	SMNDC1	100	74.370	Canis_lupus_dingo
ENSSPAG00000000338	smndc1	100	74.370	ENSCHIG00000010604	SMNDC1	100	74.370	Capra_hircus
ENSSPAG00000000338	smndc1	100	74.370	ENSTSYG00000026454	SMNDC1	100	74.370	Carlito_syrichta
ENSSPAG00000000338	smndc1	100	60.833	ENSCAPG00000009132	SMNDC1	100	72.277	Cavia_aperea
ENSSPAG00000000338	smndc1	100	75.732	ENSCPOG00000031666	SMNDC1	100	75.732	Cavia_porcellus
ENSSPAG00000000338	smndc1	100	74.370	ENSCCAG00000021793	SMNDC1	100	74.370	Cebus_capucinus
ENSSPAG00000000338	smndc1	100	73.950	ENSCATG00000035910	SMNDC1	100	73.950	Cercocebus_atys
ENSSPAG00000000338	smndc1	100	75.732	ENSCLAG00000002838	SMNDC1	100	75.732	Chinchilla_lanigera
ENSSPAG00000000338	smndc1	100	74.370	ENSCSAG00000005169	SMNDC1	100	74.370	Chlorocebus_sabaeus
ENSSPAG00000000338	smndc1	81	69.430	ENSCHOG00000002936	SMNDC1	100	69.430	Choloepus_hoffmanni
ENSSPAG00000000338	smndc1	100	74.790	ENSCPBG00000012837	SMNDC1	100	74.790	Chrysemys_picta_bellii
ENSSPAG00000000338	smndc1	100	57.563	ENSCANG00000036994	-	100	57.563	Colobus_angolensis_palliatus
ENSSPAG00000000338	smndc1	100	74.370	ENSCANG00000031720	-	100	74.370	Colobus_angolensis_palliatus
ENSSPAG00000000338	smndc1	100	68.487	ENSCANG00000034620	-	100	68.487	Colobus_angolensis_palliatus
ENSSPAG00000000338	smndc1	100	74.790	ENSCGRG00001012973	Smndc1	100	74.790	Cricetulus_griseus_chok1gshd
ENSSPAG00000000338	smndc1	100	74.790	ENSCGRG00000012396	Smndc1	100	74.790	Cricetulus_griseus_crigri
ENSSPAG00000000338	smndc1	100	85.714	ENSCSEG00000015621	smndc1	100	85.714	Cynoglossus_semilaevis
ENSSPAG00000000338	smndc1	100	87.395	ENSCVAG00000020432	smndc1	100	87.395	Cyprinodon_variegatus
ENSSPAG00000000338	smndc1	100	82.008	ENSDARG00000056235	smndc1	100	82.008	Danio_rerio
ENSSPAG00000000338	smndc1	100	74.370	ENSDNOG00000016387	SMNDC1	83	74.370	Dasypus_novemcinctus
ENSSPAG00000000338	smndc1	100	74.370	ENSDORG00000023715	Smndc1	100	74.370	Dipodomys_ordii
ENSSPAG00000000338	smndc1	93	40.816	FBgn0039977	CG17454	97	42.449	Drosophila_melanogaster
ENSSPAG00000000338	smndc1	100	68.050	ENSEBUG00000010929	smndc1	100	69.295	Eptatretus_burgeri
ENSSPAG00000000338	smndc1	100	74.370	ENSEASG00005014930	SMNDC1	100	74.370	Equus_asinus_asinus
ENSSPAG00000000338	smndc1	100	74.370	ENSECAG00000029973	SMNDC1	100	74.370	Equus_caballus
ENSSPAG00000000338	smndc1	83	53.535	ENSEEUG00000013407	-	100	53.535	Erinaceus_europaeus
ENSSPAG00000000338	smndc1	100	83.613	ENSELUG00000000227	smndc1	100	83.613	Esox_lucius
ENSSPAG00000000338	smndc1	100	74.370	ENSFCAG00000027353	SMNDC1	100	74.370	Felis_catus
ENSSPAG00000000338	smndc1	100	76.050	ENSFALG00000002306	SMNDC1	100	76.050	Ficedula_albicollis
ENSSPAG00000000338	smndc1	100	76.151	ENSFDAG00000006468	SMNDC1	100	76.151	Fukomys_damarensis
ENSSPAG00000000338	smndc1	100	89.496	ENSFHEG00000020150	smndc1	100	89.496	Fundulus_heteroclitus
ENSSPAG00000000338	smndc1	100	84.034	ENSGMOG00000016585	smndc1	100	84.034	Gadus_morhua
ENSSPAG00000000338	smndc1	100	76.050	ENSGALG00000008561	SMNDC1	100	76.050	Gallus_gallus
ENSSPAG00000000338	smndc1	100	89.076	ENSGAFG00000011582	smndc1	100	89.076	Gambusia_affinis
ENSSPAG00000000338	smndc1	100	89.916	ENSGACG00000009468	smndc1	100	89.916	Gasterosteus_aculeatus
ENSSPAG00000000338	smndc1	100	74.790	ENSGAGG00000024547	SMNDC1	100	74.790	Gopherus_agassizii
ENSSPAG00000000338	smndc1	100	74.370	ENSGGOG00000010071	SMNDC1	100	74.370	Gorilla_gorilla
ENSSPAG00000000338	smndc1	100	90.336	ENSHBUG00000017596	smndc1	100	90.336	Haplochromis_burtoni
ENSSPAG00000000338	smndc1	100	76.151	ENSHGLG00000013390	-	100	76.151	Heterocephalus_glaber_female
ENSSPAG00000000338	smndc1	100	53.469	ENSHGLG00000001157	-	100	53.878	Heterocephalus_glaber_female
ENSSPAG00000000338	smndc1	100	59.592	ENSHGLG00100004278	-	100	57.895	Heterocephalus_glaber_male
ENSSPAG00000000338	smndc1	100	76.151	ENSHGLG00100004814	-	100	76.151	Heterocephalus_glaber_male
ENSSPAG00000000338	smndc1	100	83.682	ENSHCOG00000000783	smndc1	100	83.682	Hippocampus_comes
ENSSPAG00000000338	smndc1	100	83.193	ENSIPUG00000004217	smndc1	100	83.193	Ictalurus_punctatus
ENSSPAG00000000338	smndc1	100	74.370	ENSSTOG00000006088	SMNDC1	100	74.370	Ictidomys_tridecemlineatus
ENSSPAG00000000338	smndc1	100	75.732	ENSJJAG00000019974	Smndc1	100	75.732	Jaculus_jaculus
ENSSPAG00000000338	smndc1	100	88.235	ENSKMAG00000020134	smndc1	100	88.235	Kryptolebias_marmoratus
ENSSPAG00000000338	smndc1	100	91.597	ENSLBEG00000004598	smndc1	100	91.597	Labrus_bergylta
ENSSPAG00000000338	smndc1	100	76.050	ENSLACG00000007784	SMNDC1	100	76.050	Latimeria_chalumnae
ENSSPAG00000000338	smndc1	100	80.252	ENSLOCG00000012355	smndc1	100	80.252	Lepisosteus_oculatus
ENSSPAG00000000338	smndc1	100	73.950	ENSLAFG00000014353	SMNDC1	100	73.950	Loxodonta_africana
ENSSPAG00000000338	smndc1	100	63.445	ENSMFAG00000038381	-	100	63.445	Macaca_fascicularis
ENSSPAG00000000338	smndc1	100	74.370	ENSMFAG00000002433	-	100	74.370	Macaca_fascicularis
ENSSPAG00000000338	smndc1	100	63.445	ENSMMUG00000045875	-	100	63.445	Macaca_mulatta
ENSSPAG00000000338	smndc1	100	74.370	ENSMMUG00000007775	SMNDC1	100	74.370	Macaca_mulatta
ENSSPAG00000000338	smndc1	100	65.126	ENSMNEG00000033853	-	100	65.126	Macaca_nemestrina
ENSSPAG00000000338	smndc1	100	74.370	ENSMNEG00000042963	-	100	74.370	Macaca_nemestrina
ENSSPAG00000000338	smndc1	100	69.456	ENSMLEG00000040236	SMNDC1	100	69.038	Mandrillus_leucophaeus
ENSSPAG00000000338	smndc1	89	89.202	ENSMAMG00000018233	smndc1	87	89.202	Mastacembelus_armatus
ENSSPAG00000000338	smndc1	100	90.336	ENSMZEG00005027510	smndc1	100	90.336	Maylandia_zebra
ENSSPAG00000000338	smndc1	84	75.000	ENSMGAG00000010777	SMNDC1	84	75.000	Meleagris_gallopavo
ENSSPAG00000000338	smndc1	99	62.025	ENSMAUG00000005459	-	93	62.025	Mesocricetus_auratus
ENSSPAG00000000338	smndc1	100	74.370	ENSMAUG00000012243	-	100	74.370	Mesocricetus_auratus
ENSSPAG00000000338	smndc1	100	63.866	ENSMICG00000031640	-	100	63.866	Microcebus_murinus
ENSSPAG00000000338	smndc1	100	75.314	ENSMICG00000027336	-	100	75.314	Microcebus_murinus
ENSSPAG00000000338	smndc1	100	73.950	ENSMOCG00000002458	Smndc1	100	73.950	Microtus_ochrogaster
ENSSPAG00000000338	smndc1	100	87.395	ENSMMOG00000008856	smndc1	100	87.395	Mola_mola
ENSSPAG00000000338	smndc1	100	74.790	ENSMODG00000010542	SMNDC1	100	74.790	Monodelphis_domestica
ENSSPAG00000000338	smndc1	100	89.496	ENSMALG00000017598	smndc1	100	89.496	Monopterus_albus
ENSSPAG00000000338	smndc1	100	75.732	MGP_CAROLIEiJ_G0023072	Smndc1	100	75.732	Mus_caroli
ENSSPAG00000000338	smndc1	100	74.370	ENSMUSG00000025024	Smndc1	100	74.370	Mus_musculus
ENSSPAG00000000338	smndc1	100	74.370	MGP_PahariEiJ_G0014560	Smndc1	100	74.370	Mus_pahari
ENSSPAG00000000338	smndc1	100	74.370	MGP_SPRETEiJ_G0023993	Smndc1	100	74.370	Mus_spretus
ENSSPAG00000000338	smndc1	100	74.370	ENSMPUG00000002089	SMNDC1	100	74.370	Mustela_putorius_furo
ENSSPAG00000000338	smndc1	100	74.370	ENSMLUG00000016007	SMNDC1	100	74.370	Myotis_lucifugus
ENSSPAG00000000338	smndc1	100	76.569	ENSNGAG00000006833	Smndc1	100	76.569	Nannospalax_galili
ENSSPAG00000000338	smndc1	100	90.336	ENSNBRG00000017089	smndc1	100	90.336	Neolamprologus_brichardi
ENSSPAG00000000338	smndc1	100	74.370	ENSNLEG00000015471	SMNDC1	100	74.370	Nomascus_leucogenys
ENSSPAG00000000338	smndc1	82	54.680	ENSMEUG00000010120	-	100	54.412	Notamacropus_eugenii
ENSSPAG00000000338	smndc1	100	75.732	ENSOPRG00000015348	SMNDC1	100	75.732	Ochotona_princeps
ENSSPAG00000000338	smndc1	100	54.202	ENSODEG00000007594	-	100	52.101	Octodon_degus
ENSSPAG00000000338	smndc1	100	90.336	ENSONIG00000000434	smndc1	100	90.336	Oreochromis_niloticus
ENSSPAG00000000338	smndc1	100	75.210	ENSOANG00000001598	SMNDC1	100	75.210	Ornithorhynchus_anatinus
ENSSPAG00000000338	smndc1	100	54.202	ENSOCUG00000012274	-	100	56.303	Oryctolagus_cuniculus
ENSSPAG00000000338	smndc1	100	75.732	ENSOCUG00000008145	-	100	75.732	Oryctolagus_cuniculus
ENSSPAG00000000338	smndc1	100	83.613	ENSORLG00000005934	smndc1	95	83.613	Oryzias_latipes
ENSSPAG00000000338	smndc1	100	83.613	ENSORLG00020008796	smndc1	95	83.613	Oryzias_latipes_hni
ENSSPAG00000000338	smndc1	100	83.193	ENSORLG00015013666	smndc1	100	83.193	Oryzias_latipes_hsok
ENSSPAG00000000338	smndc1	100	81.092	ENSOMEG00000007590	smndc1	100	81.092	Oryzias_melastigma
ENSSPAG00000000338	smndc1	100	74.370	ENSOGAG00000000571	SMNDC1	100	74.370	Otolemur_garnettii
ENSSPAG00000000338	smndc1	100	74.370	ENSOARG00000009500	SMNDC1	100	74.370	Ovis_aries
ENSSPAG00000000338	smndc1	100	74.370	ENSPPAG00000027815	SMNDC1	100	74.370	Pan_paniscus
ENSSPAG00000000338	smndc1	100	74.370	ENSPPRG00000013749	SMNDC1	100	74.370	Panthera_pardus
ENSSPAG00000000338	smndc1	100	74.370	ENSPTIG00000011451	SMNDC1	100	74.370	Panthera_tigris_altaica
ENSSPAG00000000338	smndc1	100	74.370	ENSPTRG00000002937	SMNDC1	100	74.370	Pan_troglodytes
ENSSPAG00000000338	smndc1	100	74.370	ENSPANG00000020805	-	100	74.370	Papio_anubis
ENSSPAG00000000338	smndc1	100	70.588	ENSPANG00000031346	-	100	70.588	Papio_anubis
ENSSPAG00000000338	smndc1	100	79.412	ENSPKIG00000017164	smndc1	100	79.412	Paramormyrops_kingsleyae
ENSSPAG00000000338	smndc1	100	75.210	ENSPSIG00000012257	SMNDC1	100	75.210	Pelodiscus_sinensis
ENSSPAG00000000338	smndc1	100	82.353	ENSPMGG00000015651	smndc1	100	82.353	Periophthalmus_magnuspinnatus
ENSSPAG00000000338	smndc1	100	74.370	ENSPEMG00000022058	Smndc1	100	74.370	Peromyscus_maniculatus_bairdii
ENSSPAG00000000338	smndc1	100	65.021	ENSPMAG00000007705	smndc1	100	65.021	Petromyzon_marinus
ENSSPAG00000000338	smndc1	95	57.965	ENSPCIG00000009693	-	98	57.965	Phascolarctos_cinereus
ENSSPAG00000000338	smndc1	100	74.790	ENSPCIG00000018419	SMNDC1	100	74.790	Phascolarctos_cinereus
ENSSPAG00000000338	smndc1	100	89.916	ENSPFOG00000017113	smndc1	100	89.916	Poecilia_formosa
ENSSPAG00000000338	smndc1	100	89.076	ENSPLAG00000010372	smndc1	100	89.076	Poecilia_latipinna
ENSSPAG00000000338	smndc1	100	89.496	ENSPMEG00000012288	smndc1	100	89.496	Poecilia_mexicana
ENSSPAG00000000338	smndc1	100	87.815	ENSPREG00000012279	smndc1	100	87.815	Poecilia_reticulata
ENSSPAG00000000338	smndc1	100	74.370	ENSPPYG00000002643	SMNDC1	100	74.370	Pongo_abelii
ENSSPAG00000000338	smndc1	81	69.948	ENSPCAG00000016183	SMNDC1	100	69.948	Procavia_capensis
ENSSPAG00000000338	smndc1	100	73.950	ENSPCOG00000024343	SMNDC1	100	73.950	Propithecus_coquereli
ENSSPAG00000000338	smndc1	100	61.088	ENSPVAG00000004368	SMNDC1	100	61.088	Pteropus_vampyrus
ENSSPAG00000000338	smndc1	83	89.899	ENSPNYG00000024093	smndc1	86	89.899	Pundamilia_nyererei
ENSSPAG00000000338	smndc1	100	81.092	ENSPNAG00000025285	smndc1	100	81.092	Pygocentrus_nattereri
ENSSPAG00000000338	smndc1	100	75.732	ENSRNOG00000014833	Smndc1	100	75.732	Rattus_norvegicus
ENSSPAG00000000338	smndc1	100	61.345	ENSRBIG00000032452	-	100	61.345	Rhinopithecus_bieti
ENSSPAG00000000338	smndc1	100	73.950	ENSRBIG00000000224	-	100	73.950	Rhinopithecus_bieti
ENSSPAG00000000338	smndc1	100	61.345	ENSRROG00000039125	-	100	61.345	Rhinopithecus_roxellana
ENSSPAG00000000338	smndc1	100	74.370	ENSRROG00000044992	-	100	74.370	Rhinopithecus_roxellana
ENSSPAG00000000338	smndc1	100	74.370	ENSSBOG00000026789	SMNDC1	100	74.370	Saimiri_boliviensis_boliviensis
ENSSPAG00000000338	smndc1	100	74.790	ENSSHAG00000015189	SMNDC1	100	74.790	Sarcophilus_harrisii
ENSSPAG00000000338	smndc1	100	77.731	ENSSFOG00015008311	smndc1	100	77.731	Scleropages_formosus
ENSSPAG00000000338	smndc1	100	91.597	ENSSMAG00000020118	smndc1	100	91.597	Scophthalmus_maximus
ENSSPAG00000000338	smndc1	100	93.697	ENSSDUG00000015330	smndc1	100	93.697	Seriola_dumerili
ENSSPAG00000000338	smndc1	100	93.277	ENSSLDG00000017325	smndc1	100	93.277	Seriola_lalandi_dorsalis
ENSSPAG00000000338	smndc1	100	76.151	ENSSARG00000006063	SMNDC1	100	76.151	Sorex_araneus
ENSSPAG00000000338	smndc1	100	75.630	ENSSPUG00000004574	SMNDC1	100	75.630	Sphenodon_punctatus
ENSSPAG00000000338	smndc1	100	74.370	ENSSSCG00000030507	SMNDC1	100	74.370	Sus_scrofa
ENSSPAG00000000338	smndc1	100	76.050	ENSTGUG00000010599	SMNDC1	100	76.050	Taeniopygia_guttata
ENSSPAG00000000338	smndc1	100	84.454	ENSTRUG00000023281	smndc1	100	84.454	Takifugu_rubripes
ENSSPAG00000000338	smndc1	100	84.454	ENSTNIG00000013331	smndc1	100	84.454	Tetraodon_nigroviridis
ENSSPAG00000000338	smndc1	100	74.370	ENSTBEG00000014337	SMNDC1	100	75.732	Tupaia_belangeri
ENSSPAG00000000338	smndc1	100	74.370	ENSUAMG00000008142	SMNDC1	100	74.370	Ursus_americanus
ENSSPAG00000000338	smndc1	100	74.370	ENSUMAG00000023722	SMNDC1	100	74.370	Ursus_maritimus
ENSSPAG00000000338	smndc1	83	73.232	ENSVPAG00000003402	SMNDC1	100	73.232	Vicugna_pacos
ENSSPAG00000000338	smndc1	100	74.370	ENSVVUG00000007820	SMNDC1	100	74.370	Vulpes_vulpes
ENSSPAG00000000338	smndc1	60	59.859	ENSXETG00000015415	SMNDC1	100	59.859	Xenopus_tropicalis
ENSSPAG00000000338	smndc1	100	89.076	ENSXCOG00000009159	smndc1	100	89.076	Xiphophorus_couchianus
ENSSPAG00000000338	smndc1	100	89.076	ENSXMAG00000012755	smndc1	100	89.076	Xiphophorus_maculatus