EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000000458 (Gene tree)
Gene ID: 103357123
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 6172 bases
Position: chrKK580307.1:41610-47781
Accession: 103357123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000000615	Exo_endo_phos	PF03372.23	2.7e-20	1	1
ENSSPAP00000000590	Exo_endo_phos	PF03372.23	2.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000000599	-	3191	XM_008281529	ENSSPAP00000000590	310 (aa)	XP_008279751	UPI000496CDB3
ENSSPAT00000000623	-	918	-	ENSSPAP00000000615	305 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000000458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000000458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000000458	apex1	99	64.873	ENSG00000100823	APEX1	88	69.892	Homo_sapiens
ENSSPAG00000000458	apex1	100	92.258	ENSAPOG00000017002	apex1	100	92.258	Acanthochromis_polyacanthus
ENSSPAG00000000458	apex1	99	64.873	ENSAMEG00000005418	APEX1	88	69.534	Ailuropoda_melanoleuca
ENSSPAG00000000458	apex1	91	89.170	ENSACIG00000010653	apex1	95	89.286	Amphilophus_citrinellus
ENSSPAG00000000458	apex1	100	92.903	ENSAOCG00000009649	apex1	100	92.903	Amphiprion_ocellaris
ENSSPAG00000000458	apex1	100	93.226	ENSAPEG00000021453	apex1	100	93.226	Amphiprion_percula
ENSSPAG00000000458	apex1	99	89.320	ENSATEG00000002883	apex1	97	89.320	Anabas_testudineus
ENSSPAG00000000458	apex1	99	67.302	ENSACAG00000008099	APEX1	99	67.302	Anolis_carolinensis
ENSSPAG00000000458	apex1	99	65.506	ENSANAG00000030117	APEX1	99	65.506	Aotus_nancymaae
ENSSPAG00000000458	apex1	100	89.032	ENSACLG00000018441	apex1	100	89.032	Astatotilapia_calliptera
ENSSPAG00000000458	apex1	99	83.871	ENSAMXG00000034699	apex1	99	83.871	Astyanax_mexicanus
ENSSPAG00000000458	apex1	99	64.873	ENSBTAG00000002745	APEX1	99	64.873	Bos_taurus
ENSSPAG00000000458	apex1	94	43.599	WBGene00001372	exo-3	92	45.693	Caenorhabditis_elegans
ENSSPAG00000000458	apex1	99	65.506	ENSCJAG00000009726	APEX1	99	65.506	Callithrix_jacchus
ENSSPAG00000000458	apex1	99	65.823	ENSCAFG00000032033	APEX1	99	65.823	Canis_familiaris
ENSSPAG00000000458	apex1	53	57.647	ENSCAFG00020023002	-	94	57.647	Canis_lupus_dingo
ENSSPAG00000000458	apex1	99	65.823	ENSCAFG00020014377	-	99	65.823	Canis_lupus_dingo
ENSSPAG00000000458	apex1	99	64.873	ENSCHIG00000007298	-	99	64.873	Capra_hircus
ENSSPAG00000000458	apex1	91	54.317	ENSCHIG00000014537	-	89	54.317	Capra_hircus
ENSSPAG00000000458	apex1	99	64.241	ENSTSYG00000034813	APEX1	99	64.241	Carlito_syrichta
ENSSPAG00000000458	apex1	94	63.103	ENSCAPG00000016235	APEX1	91	70.763	Cavia_aperea
ENSSPAG00000000458	apex1	96	69.283	ENSCPOG00000030909	APEX1	88	70.968	Cavia_porcellus
ENSSPAG00000000458	apex1	91	60.573	ENSCCAG00000031931	-	87	60.573	Cebus_capucinus
ENSSPAG00000000458	apex1	99	65.506	ENSCCAG00000033056	-	99	65.506	Cebus_capucinus
ENSSPAG00000000458	apex1	96	67.918	ENSCATG00000015580	APEX1	88	69.892	Cercocebus_atys
ENSSPAG00000000458	apex1	96	68.259	ENSCLAG00000001002	APEX1	88	70.251	Chinchilla_lanigera
ENSSPAG00000000458	apex1	96	68.259	ENSCSAG00000016670	-	88	70.251	Chlorocebus_sabaeus
ENSSPAG00000000458	apex1	96	68.259	ENSCSAG00000016685	-	88	70.251	Chlorocebus_sabaeus
ENSSPAG00000000458	apex1	99	67.722	ENSCPBG00000009567	APEX1	99	67.722	Chrysemys_picta_bellii
ENSSPAG00000000458	apex1	95	55.326	ENSCING00000008137	-	85	58.427	Ciona_intestinalis
ENSSPAG00000000458	apex1	99	47.573	ENSCSAVG00000007144	-	100	53.101	Ciona_savignyi
ENSSPAG00000000458	apex1	96	67.918	ENSCANG00000030726	APEX1	88	69.892	Colobus_angolensis_palliatus
ENSSPAG00000000458	apex1	99	63.492	ENSCGRG00001017046	Apex1	99	64.444	Cricetulus_griseus_chok1gshd
ENSSPAG00000000458	apex1	99	63.492	ENSCGRG00000008984	Apex1	99	64.444	Cricetulus_griseus_crigri
ENSSPAG00000000458	apex1	100	86.774	ENSCSEG00000017499	apex1	99	86.774	Cynoglossus_semilaevis
ENSSPAG00000000458	apex1	100	91.613	ENSCVAG00000022075	apex1	100	91.613	Cyprinodon_variegatus
ENSSPAG00000000458	apex1	99	82.524	ENSDARG00000045843	apex1	99	82.524	Danio_rerio
ENSSPAG00000000458	apex1	99	62.025	ENSDNOG00000042234	APEX1	94	62.025	Dasypus_novemcinctus
ENSSPAG00000000458	apex1	99	65.190	ENSDORG00000001616	Apex1	99	65.190	Dipodomys_ordii
ENSSPAG00000000458	apex1	99	65.190	ENSETEG00000004855	-	99	65.190	Echinops_telfairi
ENSSPAG00000000458	apex1	78	60.924	ENSEBUG00000000622	-	92	60.924	Eptatretus_burgeri
ENSSPAG00000000458	apex1	96	68.601	ENSEASG00005017489	APEX1	65	70.251	Equus_asinus_asinus
ENSSPAG00000000458	apex1	96	68.601	ENSECAG00000022325	APEX1	72	70.251	Equus_caballus
ENSSPAG00000000458	apex1	88	69.517	ENSEEUG00000012569	APEX1	93	69.517	Erinaceus_europaeus
ENSSPAG00000000458	apex1	99	81.994	ENSELUG00000021706	apex1	99	83.923	Esox_lucius
ENSSPAG00000000458	apex1	96	68.601	ENSFCAG00000030869	APEX1	88	70.609	Felis_catus
ENSSPAG00000000458	apex1	96	68.601	ENSFDAG00000006120	APEX1	88	70.609	Fukomys_damarensis
ENSSPAG00000000458	apex1	100	89.677	ENSFHEG00000009031	apex1	83	89.677	Fundulus_heteroclitus
ENSSPAG00000000458	apex1	100	76.452	ENSGMOG00000007943	apex1	99	76.452	Gadus_morhua
ENSSPAG00000000458	apex1	100	89.355	ENSGAFG00000005311	apex1	100	89.355	Gambusia_affinis
ENSSPAG00000000458	apex1	100	89.355	ENSGACG00000019497	apex1	99	90.602	Gasterosteus_aculeatus
ENSSPAG00000000458	apex1	99	67.405	ENSGAGG00000014999	APEX1	99	67.405	Gopherus_agassizii
ENSSPAG00000000458	apex1	99	64.557	ENSGGOG00000002128	APEX1	88	69.534	Gorilla_gorilla
ENSSPAG00000000458	apex1	100	88.710	ENSHBUG00000005894	apex1	100	88.710	Haplochromis_burtoni
ENSSPAG00000000458	apex1	96	68.259	ENSHGLG00000002848	APEX1	88	70.251	Heterocephalus_glaber_female
ENSSPAG00000000458	apex1	96	68.259	ENSHGLG00100017878	APEX1	88	70.251	Heterocephalus_glaber_male
ENSSPAG00000000458	apex1	100	88.424	ENSHCOG00000009961	apex1	100	88.424	Hippocampus_comes
ENSSPAG00000000458	apex1	98	83.000	ENSIPUG00000005799	apex1	99	81.230	Ictalurus_punctatus
ENSSPAG00000000458	apex1	99	66.139	ENSSTOG00000010096	APEX1	99	66.139	Ictidomys_tridecemlineatus
ENSSPAG00000000458	apex1	99	57.508	ENSJJAG00000003660	-	88	60.932	Jaculus_jaculus
ENSSPAG00000000458	apex1	99	64.856	ENSJJAG00000012067	-	98	64.856	Jaculus_jaculus
ENSSPAG00000000458	apex1	91	61.290	ENSJJAG00000020465	-	90	61.290	Jaculus_jaculus
ENSSPAG00000000458	apex1	100	87.419	ENSKMAG00000021171	apex1	100	87.419	Kryptolebias_marmoratus
ENSSPAG00000000458	apex1	100	88.387	ENSLBEG00000010248	apex1	100	88.387	Labrus_bergylta
ENSSPAG00000000458	apex1	99	71.338	ENSLACG00000008617	APEX1	89	75.357	Latimeria_chalumnae
ENSSPAG00000000458	apex1	99	74.441	ENSLOCG00000015516	apex1	99	74.121	Lepisosteus_oculatus
ENSSPAG00000000458	apex1	99	66.139	ENSLAFG00000021872	APEX1	88	71.326	Loxodonta_africana
ENSSPAG00000000458	apex1	96	67.918	ENSMFAG00000002565	APEX1	88	69.892	Macaca_fascicularis
ENSSPAG00000000458	apex1	96	67.918	ENSMMUG00000048039	APEX1	88	69.892	Macaca_mulatta
ENSSPAG00000000458	apex1	96	67.918	ENSMNEG00000036944	APEX1	88	69.892	Macaca_nemestrina
ENSSPAG00000000458	apex1	96	67.918	ENSMLEG00000042125	APEX1	88	69.892	Mandrillus_leucophaeus
ENSSPAG00000000458	apex1	100	87.419	ENSMAMG00000023526	apex1	100	87.419	Mastacembelus_armatus
ENSSPAG00000000458	apex1	100	89.032	ENSMZEG00005014187	apex1	100	89.032	Maylandia_zebra
ENSSPAG00000000458	apex1	99	64.331	ENSMAUG00000013994	Apex1	88	68.100	Mesocricetus_auratus
ENSSPAG00000000458	apex1	99	64.241	ENSMICG00000043554	APEX1	99	64.241	Microcebus_murinus
ENSSPAG00000000458	apex1	99	65.714	ENSMOCG00000013721	Apex1	99	65.714	Microtus_ochrogaster
ENSSPAG00000000458	apex1	100	84.887	ENSMMOG00000010031	apex1	97	84.887	Mola_mola
ENSSPAG00000000458	apex1	91	69.176	ENSMODG00000007125	APEX1	87	69.176	Monodelphis_domestica
ENSSPAG00000000458	apex1	92	82.143	ENSMALG00000011699	apex1	80	81.081	Monopterus_albus
ENSSPAG00000000458	apex1	99	65.605	MGP_CAROLIEiJ_G0019209	Apex1	99	65.605	Mus_caroli
ENSSPAG00000000458	apex1	99	65.714	ENSMUSG00000035960	Apex1	99	65.714	Mus_musculus
ENSSPAG00000000458	apex1	99	66.032	MGP_PahariEiJ_G0030232	Apex1	99	66.032	Mus_pahari
ENSSPAG00000000458	apex1	99	65.714	MGP_SPRETEiJ_G0020101	Apex1	99	65.714	Mus_spretus
ENSSPAG00000000458	apex1	96	67.577	ENSMLUG00000028957	APEX1	87	69.176	Myotis_lucifugus
ENSSPAG00000000458	apex1	87	51.625	ENSNGAG00000021748	-	72	55.833	Nannospalax_galili
ENSSPAG00000000458	apex1	99	65.506	ENSNGAG00000002725	-	99	65.506	Nannospalax_galili
ENSSPAG00000000458	apex1	100	89.677	ENSNBRG00000005334	apex1	91	89.677	Neolamprologus_brichardi
ENSSPAG00000000458	apex1	99	64.557	ENSNLEG00000010839	APEX1	99	64.557	Nomascus_leucogenys
ENSSPAG00000000458	apex1	99	63.782	ENSMEUG00000014519	APEX1	89	68.100	Notamacropus_eugenii
ENSSPAG00000000458	apex1	99	64.127	ENSOPRG00000014029	APEX1	88	68.100	Ochotona_princeps
ENSSPAG00000000458	apex1	99	51.274	ENSODEG00000006583	-	87	54.386	Octodon_degus
ENSSPAG00000000458	apex1	96	68.259	ENSODEG00000001703	-	88	70.251	Octodon_degus
ENSSPAG00000000458	apex1	83	56.746	ENSODEG00000004777	-	83	56.746	Octodon_degus
ENSSPAG00000000458	apex1	100	89.032	ENSONIG00000012089	apex1	100	89.032	Oreochromis_niloticus
ENSSPAG00000000458	apex1	90	69.455	ENSOANG00000008836	APEX1	68	69.455	Ornithorhynchus_anatinus
ENSSPAG00000000458	apex1	99	65.190	ENSOCUG00000005022	APEX1	99	65.190	Oryctolagus_cuniculus
ENSSPAG00000000458	apex1	100	88.424	ENSORLG00000012378	apex1	100	88.424	Oryzias_latipes
ENSSPAG00000000458	apex1	100	88.424	ENSORLG00020021371	apex1	100	88.424	Oryzias_latipes_hni
ENSSPAG00000000458	apex1	100	88.424	ENSORLG00015020089	apex1	100	88.424	Oryzias_latipes_hsok
ENSSPAG00000000458	apex1	100	88.746	ENSOMEG00000018876	apex1	100	88.746	Oryzias_melastigma
ENSSPAG00000000458	apex1	96	68.259	ENSOGAG00000013335	-	88	70.251	Otolemur_garnettii
ENSSPAG00000000458	apex1	99	58.117	ENSOGAG00000029355	-	89	62.007	Otolemur_garnettii
ENSSPAG00000000458	apex1	99	64.873	ENSOARG00000019740	-	99	64.873	Ovis_aries
ENSSPAG00000000458	apex1	99	54.723	ENSOARG00000014424	-	89	57.348	Ovis_aries
ENSSPAG00000000458	apex1	96	62.418	ENSOARG00000001876	-	99	62.418	Ovis_aries
ENSSPAG00000000458	apex1	99	64.873	ENSPPAG00000038760	APEX1	89	69.892	Pan_paniscus
ENSSPAG00000000458	apex1	99	65.506	ENSPPRG00000011794	APEX1	88	70.609	Panthera_pardus
ENSSPAG00000000458	apex1	96	68.601	ENSPTIG00000014829	APEX1	88	70.609	Panthera_tigris_altaica
ENSSPAG00000000458	apex1	99	64.873	ENSPTRG00000006093	APEX1	89	69.892	Pan_troglodytes
ENSSPAG00000000458	apex1	96	67.918	ENSPANG00000022757	APEX1	88	69.892	Papio_anubis
ENSSPAG00000000458	apex1	90	85.507	ENSPKIG00000003504	apex1	99	82.372	Paramormyrops_kingsleyae
ENSSPAG00000000458	apex1	88	77.323	ENSPMGG00000016596	apex1	79	77.323	Periophthalmus_magnuspinnatus
ENSSPAG00000000458	apex1	99	64.762	ENSPEMG00000019097	Apex1	99	64.762	Peromyscus_maniculatus_bairdii
ENSSPAG00000000458	apex1	94	70.447	ENSPMAG00000007275	-	95	72.043	Petromyzon_marinus
ENSSPAG00000000458	apex1	91	68.100	ENSPCIG00000023274	APEX1	87	68.100	Phascolarctos_cinereus
ENSSPAG00000000458	apex1	100	88.710	ENSPFOG00000004178	apex1	100	88.710	Poecilia_formosa
ENSSPAG00000000458	apex1	100	89.032	ENSPLAG00000012779	apex1	100	89.032	Poecilia_latipinna
ENSSPAG00000000458	apex1	100	88.710	ENSPMEG00000019623	apex1	100	88.710	Poecilia_mexicana
ENSSPAG00000000458	apex1	100	87.097	ENSPREG00000014298	apex1	99	87.097	Poecilia_reticulata
ENSSPAG00000000458	apex1	99	64.557	ENSPPYG00000005565	APEX1	88	69.534	Pongo_abelii
ENSSPAG00000000458	apex1	99	64.241	ENSPCAG00000010376	APEX1	99	64.241	Procavia_capensis
ENSSPAG00000000458	apex1	96	67.577	ENSPCOG00000021564	APEX1	99	64.557	Propithecus_coquereli
ENSSPAG00000000458	apex1	94	68.512	ENSPVAG00000010736	APEX1	87	69.892	Pteropus_vampyrus
ENSSPAG00000000458	apex1	100	89.355	ENSPNYG00000023940	apex1	100	89.355	Pundamilia_nyererei
ENSSPAG00000000458	apex1	92	82.918	ENSPNAG00000020897	apex1	96	82.807	Pygocentrus_nattereri
ENSSPAG00000000458	apex1	99	65.397	ENSRNOG00000009663	Apex1	99	65.397	Rattus_norvegicus
ENSSPAG00000000458	apex1	96	67.918	ENSRBIG00000038325	APEX1	87	69.892	Rhinopithecus_bieti
ENSSPAG00000000458	apex1	98	59.000	ENSSBOG00000031372	-	91	61.649	Saimiri_boliviensis_boliviensis
ENSSPAG00000000458	apex1	99	65.506	ENSSBOG00000018921	-	99	65.506	Saimiri_boliviensis_boliviensis
ENSSPAG00000000458	apex1	91	67.730	ENSSHAG00000013524	APEX1	87	67.730	Sarcophilus_harrisii
ENSSPAG00000000458	apex1	99	79.288	ENSSFOG00015001948	apex1	99	79.288	Scleropages_formosus
ENSSPAG00000000458	apex1	100	86.984	ENSSMAG00000013348	apex1	100	87.302	Scophthalmus_maximus
ENSSPAG00000000458	apex1	100	87.097	ENSSDUG00000016377	apex1	99	87.097	Seriola_dumerili
ENSSPAG00000000458	apex1	100	87.742	ENSSLDG00000023005	apex1	100	87.742	Seriola_lalandi_dorsalis
ENSSPAG00000000458	apex1	92	70.357	ENSSPUG00000000531	APEX1	94	70.251	Sphenodon_punctatus
ENSSPAG00000000458	apex1	94	40.333	ENSSSCG00000039705	-	89	41.155	Sus_scrofa
ENSSPAG00000000458	apex1	99	64.873	ENSSSCG00000040060	-	99	65.506	Sus_scrofa
ENSSPAG00000000458	apex1	77	57.021	ENSTGUG00000014378	APEX1	100	57.021	Taeniopygia_guttata
ENSSPAG00000000458	apex1	100	84.345	ENSTRUG00000004268	apex1	95	84.665	Takifugu_rubripes
ENSSPAG00000000458	apex1	100	84.839	ENSTNIG00000005778	apex1	100	84.839	Tetraodon_nigroviridis
ENSSPAG00000000458	apex1	99	62.658	ENSTBEG00000006405	APEX1	99	62.658	Tupaia_belangeri
ENSSPAG00000000458	apex1	77	68.511	ENSTTRG00000007860	APEX1	100	68.511	Tursiops_truncatus
ENSSPAG00000000458	apex1	96	68.259	ENSUAMG00000010457	APEX1	88	69.534	Ursus_americanus
ENSSPAG00000000458	apex1	96	68.259	ENSUMAG00000009178	APEX1	88	69.534	Ursus_maritimus
ENSSPAG00000000458	apex1	77	66.383	ENSVPAG00000005083	APEX1	100	66.383	Vicugna_pacos
ENSSPAG00000000458	apex1	99	65.506	ENSVVUG00000009010	APEX1	99	65.506	Vulpes_vulpes
ENSSPAG00000000458	apex1	99	66.879	ENSXETG00000024773	apex1	99	66.879	Xenopus_tropicalis
ENSSPAG00000000458	apex1	100	88.710	ENSXCOG00000015233	apex1	99	88.710	Xiphophorus_couchianus
ENSSPAG00000000458	apex1	100	88.710	ENSXMAG00000006195	apex1	100	88.710	Xiphophorus_maculatus