EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000000688 (Gene tree)
Gene ID: 103358223
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 8620 bases
Position: chrKK580368.1:377166-385785
Accession: 103358223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000001152	RRM_1	PF00076.22	4.3e-29	1	2
ENSSPAP00000001152	RRM_1	PF00076.22	4.3e-29	2	2
ENSSPAP00000001131	RRM_1	PF00076.22	4.7e-29	1	2
ENSSPAP00000001131	RRM_1	PF00076.22	4.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000001150	-	2247	-	ENSSPAP00000001131	748 (aa)	-	-
ENSSPAT00000001171	-	2202	XM_008283103	ENSSPAP00000001152	733 (aa)	XP_008281325	-

Gene Model

Click here to download ENSSPAG00000000688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000000688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000000688	raver1	92	52.531	ENSG00000161847	RAVER1	79	61.842	Homo_sapiens
ENSSPAG00000000688	raver1	98	94.421	ENSAPOG00000017267	raver1	90	94.421	Acanthochromis_polyacanthus
ENSSPAG00000000688	raver1	80	58.400	ENSAMEG00000011738	RAVER1	76	60.714	Ailuropoda_melanoleuca
ENSSPAG00000000688	raver1	98	96.089	ENSAOCG00000005128	raver1	95	96.089	Amphiprion_ocellaris
ENSSPAG00000000688	raver1	98	95.978	ENSAPEG00000010854	raver1	98	95.978	Amphiprion_percula
ENSSPAG00000000688	raver1	100	87.722	ENSATEG00000021004	raver1	98	87.812	Anabas_testudineus
ENSSPAG00000000688	raver1	78	50.493	ENSACAG00000008386	-	78	53.645	Anolis_carolinensis
ENSSPAG00000000688	raver1	81	60.317	ENSANAG00000028226	RAVER1	77	60.317	Aotus_nancymaae
ENSSPAG00000000688	raver1	100	88.692	ENSACLG00000018492	raver1	94	88.797	Astatotilapia_calliptera
ENSSPAG00000000688	raver1	98	68.356	ENSAMXG00000005132	raver1	99	66.275	Astyanax_mexicanus
ENSSPAG00000000688	raver1	92	52.083	ENSBTAG00000015721	RAVER1	97	53.295	Bos_taurus
ENSSPAG00000000688	raver1	67	60.279	ENSCJAG00000005671	RAVER1	95	52.276	Callithrix_jacchus
ENSSPAG00000000688	raver1	84	56.190	ENSCHIG00000006718	RAVER1	78	64.000	Capra_hircus
ENSSPAG00000000688	raver1	61	68.258	ENSTSYG00000027107	RAVER1	67	68.508	Carlito_syrichta
ENSSPAG00000000688	raver1	86	50.570	ENSCAPG00000002269	RAVER1	79	60.714	Cavia_aperea
ENSSPAG00000000688	raver1	91	51.362	ENSCPOG00000001008	RAVER1	58	70.520	Cavia_porcellus
ENSSPAG00000000688	raver1	67	60.479	ENSCCAG00000031723	RAVER1	95	52.486	Cebus_capucinus
ENSSPAG00000000688	raver1	67	60.279	ENSCATG00000043863	RAVER1	66	60.279	Cercocebus_atys
ENSSPAG00000000688	raver1	82	57.308	ENSCSAG00000007317	RAVER1	65	58.333	Chlorocebus_sabaeus
ENSSPAG00000000688	raver1	91	52.617	ENSCPBG00000005349	-	96	51.348	Chrysemys_picta_bellii
ENSSPAG00000000688	raver1	84	56.900	ENSCANG00000008337	RAVER1	54	83.333	Colobus_angolensis_palliatus
ENSSPAG00000000688	raver1	82	57.658	ENSCGRG00001013260	-	79	61.905	Cricetulus_griseus_chok1gshd
ENSSPAG00000000688	raver1	82	57.658	ENSCGRG00000015138	-	79	61.905	Cricetulus_griseus_crigri
ENSSPAG00000000688	raver1	98	77.060	ENSCSEG00000021092	raver1	98	77.060	Cynoglossus_semilaevis
ENSSPAG00000000688	raver1	100	82.993	ENSCVAG00000013971	raver1	98	83.380	Cyprinodon_variegatus
ENSSPAG00000000688	raver1	98	70.442	ENSDARG00000052617	raver1	98	69.199	Danio_rerio
ENSSPAG00000000688	raver1	51	80.769	ENSDNOG00000035742	-	56	61.652	Dasypus_novemcinctus
ENSSPAG00000000688	raver1	64	64.362	ENSDORG00000010106	-	68	62.136	Dipodomys_ordii
ENSSPAG00000000688	raver1	50	51.344	ENSETEG00000008201	-	55	69.347	Echinops_telfairi
ENSSPAG00000000688	raver1	51	68.617	ENSEASG00005010544	-	69	67.979	Equus_asinus_asinus
ENSSPAG00000000688	raver1	80	58.268	ENSECAG00000024966	RAVER1	76	60.163	Equus_caballus
ENSSPAG00000000688	raver1	100	77.959	ENSELUG00000023287	raver1	100	77.174	Esox_lucius
ENSSPAG00000000688	raver1	91	51.096	ENSFCAG00000009435	RAVER1	76	60.714	Felis_catus
ENSSPAG00000000688	raver1	94	71.748	ENSGMOG00000003649	raver1	99	72.448	Gadus_morhua
ENSSPAG00000000688	raver1	68	39.173	ENSGALG00000050608	-	51	39.511	Gallus_gallus
ENSSPAG00000000688	raver1	100	83.696	ENSGAFG00000015944	raver1	98	84.094	Gambusia_affinis
ENSSPAG00000000688	raver1	94	75.137	ENSGACG00000013818	raver1	99	77.049	Gasterosteus_aculeatus
ENSSPAG00000000688	raver1	80	69.086	ENSGAGG00000011748	-	96	69.086	Gopherus_agassizii
ENSSPAG00000000688	raver1	92	52.394	ENSGGOG00000006015	RAVER1	77	57.143	Gorilla_gorilla
ENSSPAG00000000688	raver1	99	88.477	ENSHBUG00000021210	raver1	93	88.579	Haplochromis_burtoni
ENSSPAG00000000688	raver1	82	56.391	ENSHGLG00000015460	RAVER1	78	60.772	Heterocephalus_glaber_female
ENSSPAG00000000688	raver1	82	56.391	ENSHGLG00100000812	RAVER1	78	60.772	Heterocephalus_glaber_male
ENSSPAG00000000688	raver1	100	77.959	ENSHCOG00000000449	raver1	96	77.486	Hippocampus_comes
ENSSPAG00000000688	raver1	98	70.083	ENSIPUG00000013153	raver1	98	70.776	Ictalurus_punctatus
ENSSPAG00000000688	raver1	82	55.970	ENSSTOG00000003241	RAVER1	78	59.524	Ictidomys_tridecemlineatus
ENSSPAG00000000688	raver1	93	51.827	ENSJJAG00000018219	-	68	66.502	Jaculus_jaculus
ENSSPAG00000000688	raver1	100	85.422	ENSKMAG00000017355	raver1	98	85.477	Kryptolebias_marmoratus
ENSSPAG00000000688	raver1	92	88.201	ENSLBEG00000008268	raver1	94	87.538	Labrus_bergylta
ENSSPAG00000000688	raver1	85	50.429	ENSLACG00000005809	-	99	46.573	Latimeria_chalumnae
ENSSPAG00000000688	raver1	98	62.435	ENSLOCG00000007500	raver1	98	61.638	Lepisosteus_oculatus
ENSSPAG00000000688	raver1	93	49.288	ENSLAFG00000003664	-	80	60.714	Loxodonta_africana
ENSSPAG00000000688	raver1	66	60.772	ENSMFAG00000037977	RAVER1	65	60.772	Macaca_fascicularis
ENSSPAG00000000688	raver1	66	60.772	ENSMMUG00000014897	RAVER1	59	68.696	Macaca_mulatta
ENSSPAG00000000688	raver1	66	60.772	ENSMNEG00000028390	RAVER1	65	60.772	Macaca_nemestrina
ENSSPAG00000000688	raver1	84	53.875	ENSMLEG00000041959	RAVER1	72	83.333	Mandrillus_leucophaeus
ENSSPAG00000000688	raver1	100	86.630	ENSMAMG00000012059	raver1	98	86.565	Mastacembelus_armatus
ENSSPAG00000000688	raver1	100	88.692	ENSMZEG00005019002	raver1	98	88.797	Maylandia_zebra
ENSSPAG00000000688	raver1	82	57.658	ENSMAUG00000017948	-	79	61.905	Mesocricetus_auratus
ENSSPAG00000000688	raver1	92	52.162	ENSMICG00000010326	RAVER1	97	53.372	Microcebus_murinus
ENSSPAG00000000688	raver1	82	57.798	ENSMOCG00000015553	-	77	61.905	Microtus_ochrogaster
ENSSPAG00000000688	raver1	100	86.767	ENSMMOG00000012093	raver1	100	86.221	Mola_mola
ENSSPAG00000000688	raver1	88	52.507	ENSMODG00000005584	-	85	52.246	Monodelphis_domestica
ENSSPAG00000000688	raver1	100	82.970	ENSMALG00000016569	raver1	99	84.647	Monopterus_albus
ENSSPAG00000000688	raver1	84	58.559	MGP_CAROLIEiJ_G0031860	-	79	63.095	Mus_caroli
ENSSPAG00000000688	raver1	82	57.658	ENSMUSG00000010205	Raver1	79	61.905	Mus_musculus
ENSSPAG00000000688	raver1	80	57.658	MGP_PahariEiJ_G0014726	-	79	61.905	Mus_pahari
ENSSPAG00000000688	raver1	82	57.658	MGP_SPRETEiJ_G0032984	-	79	61.905	Mus_spretus
ENSSPAG00000000688	raver1	80	59.759	ENSMPUG00000006712	RAVER1	76	61.134	Mustela_putorius_furo
ENSSPAG00000000688	raver1	91	52.308	ENSMLUG00000012328	RAVER1	96	52.482	Myotis_lucifugus
ENSSPAG00000000688	raver1	53	64.899	ENSNGAG00000001260	-	66	64.899	Nannospalax_galili
ENSSPAG00000000688	raver1	100	80.245	ENSNBRG00000010139	raver1	98	79.530	Neolamprologus_brichardi
ENSSPAG00000000688	raver1	84	56.522	ENSNLEG00000012181	RAVER1	77	58.333	Nomascus_leucogenys
ENSSPAG00000000688	raver1	77	60.394	ENSMEUG00000003281	-	81	64.286	Notamacropus_eugenii
ENSSPAG00000000688	raver1	60	78.846	ENSODEG00000016260	RAVER1	65	67.089	Octodon_degus
ENSSPAG00000000688	raver1	92	85.044	ENSONIG00000001559	raver1	100	85.044	Oreochromis_niloticus
ENSSPAG00000000688	raver1	84	55.932	ENSOCUG00000020918	RAVER1	97	49.728	Oryctolagus_cuniculus
ENSSPAG00000000688	raver1	100	82.947	ENSORLG00000005458	raver1	98	82.964	Oryzias_latipes
ENSSPAG00000000688	raver1	100	83.356	ENSORLG00020004392	raver1	98	83.380	Oryzias_latipes_hni
ENSSPAG00000000688	raver1	100	83.629	ENSORLG00015017222	raver1	98	83.657	Oryzias_latipes_hsok
ENSSPAG00000000688	raver1	92	92.453	ENSOMEG00000023956	raver1	98	92.453	Oryzias_melastigma
ENSSPAG00000000688	raver1	93	48.961	ENSOGAG00000011071	RAVER1	77	59.841	Otolemur_garnettii
ENSSPAG00000000688	raver1	76	78.846	ENSOARG00000015886	RAVER1	77	60.759	Ovis_aries
ENSSPAG00000000688	raver1	92	52.531	ENSPPAG00000002611	RAVER1	77	58.333	Pan_paniscus
ENSSPAG00000000688	raver1	80	58.517	ENSPPRG00000009912	RAVER1	76	60.714	Panthera_pardus
ENSSPAG00000000688	raver1	92	52.531	ENSPTRG00000010466	RAVER1	77	58.333	Pan_troglodytes
ENSSPAG00000000688	raver1	67	60.279	ENSPANG00000004122	RAVER1	66	60.279	Papio_anubis
ENSSPAG00000000688	raver1	82	57.658	ENSPEMG00000016411	-	79	61.905	Peromyscus_maniculatus_bairdii
ENSSPAG00000000688	raver1	91	53.913	ENSPCIG00000018695	-	96	53.577	Phascolarctos_cinereus
ENSSPAG00000000688	raver1	100	79.947	ENSPFOG00000007016	raver1	98	82.177	Poecilia_formosa
ENSSPAG00000000688	raver1	95	81.831	ENSPLAG00000020793	raver1	97	82.216	Poecilia_latipinna
ENSSPAG00000000688	raver1	100	83.560	ENSPMEG00000011220	raver1	98	83.956	Poecilia_mexicana
ENSSPAG00000000688	raver1	100	78.367	ENSPREG00000006864	raver1	98	78.670	Poecilia_reticulata
ENSSPAG00000000688	raver1	93	50.727	ENSPPYG00000010514	RAVER1	81	52.545	Pongo_abelii
ENSSPAG00000000688	raver1	84	55.046	ENSPCOG00000026605	RAVER1	77	59.681	Propithecus_coquereli
ENSSPAG00000000688	raver1	91	50.962	ENSPVAG00000003689	RAVER1	77	62.338	Pteropus_vampyrus
ENSSPAG00000000688	raver1	100	82.425	ENSPNYG00000013284	raver1	98	81.881	Pundamilia_nyererei
ENSSPAG00000000688	raver1	98	72.503	ENSPNAG00000015476	raver1	98	70.068	Pygocentrus_nattereri
ENSSPAG00000000688	raver1	91	50.336	ENSRNOG00000020710	Raver1	97	51.436	Rattus_norvegicus
ENSSPAG00000000688	raver1	92	53.173	ENSRBIG00000034702	RAVER1	95	52.916	Rhinopithecus_bieti
ENSSPAG00000000688	raver1	92	53.315	ENSRROG00000031186	RAVER1	95	52.991	Rhinopithecus_roxellana
ENSSPAG00000000688	raver1	92	53.230	ENSSBOG00000023423	RAVER1	95	53.333	Saimiri_boliviensis_boliviensis
ENSSPAG00000000688	raver1	85	52.968	ENSSHAG00000008181	-	90	54.037	Sarcophilus_harrisii
ENSSPAG00000000688	raver1	98	88.812	ENSSMAG00000004546	raver1	100	88.844	Scophthalmus_maximus
ENSSPAG00000000688	raver1	100	92.224	ENSSDUG00000021063	raver1	98	92.244	Seriola_dumerili
ENSSPAG00000000688	raver1	100	91.951	ENSSLDG00000014505	raver1	98	91.967	Seriola_lalandi_dorsalis
ENSSPAG00000000688	raver1	74	75.439	ENSSSCG00000013650	-	82	60.256	Sus_scrofa
ENSSPAG00000000688	raver1	98	82.182	ENSTRUG00000025641	raver1	98	81.492	Takifugu_rubripes
ENSSPAG00000000688	raver1	93	48.771	ENSTTRG00000009552	RAVER1	79	60.714	Tursiops_truncatus
ENSSPAG00000000688	raver1	80	59.800	ENSUAMG00000020385	RAVER1	76	60.729	Ursus_americanus
ENSSPAG00000000688	raver1	100	49.671	ENSXETG00000011622	raver1	94	50.515	Xenopus_tropicalis
ENSSPAG00000000688	raver1	100	84.511	ENSXCOG00000016368	raver1	98	84.924	Xiphophorus_couchianus
ENSSPAG00000000688	raver1	100	84.511	ENSXMAG00000000217	raver1	98	84.924	Xiphophorus_maculatus