EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000000914 (Gene tree)
Gene ID: 103355694
Gene Symbol: snrpc
Alias: U1C|chunp6909|zgc:109792
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 5059 bases
Position: chrKK580076.1:697575-702633
Accession: 103355694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000001172	zf-U1	PF06220.12	1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000001191	-	1032	XM_008279582	ENSSPAP00000001172	148 (aa)	XP_008277804	UPI0004955814

Gene Model

Click here to download ENSSPAG00000000914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000000914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000000914	snrpc	100	100.000	ENSAPOG00000013907	snrpc	100	100.000	Acanthochromis_polyacanthus
ENSSPAG00000000914	snrpc	100	100.000	ENSAOCG00000021151	snrpc	100	100.000	Amphiprion_ocellaris
ENSSPAG00000000914	snrpc	100	100.000	ENSAPEG00000023221	snrpc	100	100.000	Amphiprion_percula
ENSSPAG00000000914	snrpc	100	100.000	ENSATEG00000025133	snrpc	100	100.000	Anabas_testudineus
ENSSPAG00000000914	snrpc	100	97.987	ENSACLG00000000843	snrpc	100	97.987	Astatotilapia_calliptera
ENSSPAG00000000914	snrpc	100	97.315	ENSCSEG00000016845	snrpc	100	97.315	Cynoglossus_semilaevis
ENSSPAG00000000914	snrpc	100	98.649	ENSCVAG00000014297	snrpc	100	98.649	Cyprinodon_variegatus
ENSSPAG00000000914	snrpc	74	99.083	ENSFHEG00000016667	snrpc	97	99.083	Fundulus_heteroclitus
ENSSPAG00000000914	snrpc	99	97.260	ENSGMOG00000000090	snrpc	100	97.260	Gadus_morhua
ENSSPAG00000000914	snrpc	100	98.649	ENSGAFG00000016115	snrpc	100	98.649	Gambusia_affinis
ENSSPAG00000000914	snrpc	99	99.315	ENSGACG00000004899	snrpc	98	99.315	Gasterosteus_aculeatus
ENSSPAG00000000914	snrpc	100	97.987	ENSHBUG00000011637	snrpc	100	97.987	Haplochromis_burtoni
ENSSPAG00000000914	snrpc	100	96.622	ENSHCOG00000001596	snrpc	100	96.622	Hippocampus_comes
ENSSPAG00000000914	snrpc	100	98.649	ENSKMAG00000016356	snrpc	100	98.649	Kryptolebias_marmoratus
ENSSPAG00000000914	snrpc	100	99.329	ENSLBEG00000023881	snrpc	100	99.329	Labrus_bergylta
ENSSPAG00000000914	snrpc	97	58.904	ENSMLEG00000039724	-	81	52.083	Mandrillus_leucophaeus
ENSSPAG00000000914	snrpc	100	99.324	ENSMAMG00000003857	snrpc	100	99.324	Mastacembelus_armatus
ENSSPAG00000000914	snrpc	100	97.987	ENSMZEG00005002199	snrpc	100	97.987	Maylandia_zebra
ENSSPAG00000000914	snrpc	98	98.621	ENSMMOG00000013149	snrpc	100	98.621	Mola_mola
ENSSPAG00000000914	snrpc	100	97.973	ENSMALG00000001197	snrpc	100	97.973	Monopterus_albus
ENSSPAG00000000914	snrpc	100	97.987	ENSONIG00000014757	snrpc	100	97.987	Oreochromis_niloticus
ENSSPAG00000000914	snrpc	96	97.183	ENSORLG00000007308	snrpc	97	97.183	Oryzias_latipes
ENSSPAG00000000914	snrpc	96	96.503	ENSORLG00020012607	SNRPC	97	96.503	Oryzias_latipes_hni
ENSSPAG00000000914	snrpc	75	97.297	ENSOMEG00000012014	snrpc	69	97.297	Oryzias_melastigma
ENSSPAG00000000914	snrpc	96	65.789	ENSOGAG00000028405	-	67	65.049	Otolemur_garnettii
ENSSPAG00000000914	snrpc	98	96.552	ENSPMGG00000022162	snrpc	100	96.552	Periophthalmus_magnuspinnatus
ENSSPAG00000000914	snrpc	100	98.649	ENSPFOG00000015174	snrpc	100	98.649	Poecilia_formosa
ENSSPAG00000000914	snrpc	100	98.649	ENSPLAG00000012311	snrpc	100	98.649	Poecilia_latipinna
ENSSPAG00000000914	snrpc	100	98.649	ENSPMEG00000010274	snrpc	100	98.649	Poecilia_mexicana
ENSSPAG00000000914	snrpc	99	84.247	ENSPREG00000013017	snrpc	79	84.247	Poecilia_reticulata
ENSSPAG00000000914	snrpc	100	83.019	ENSPNAG00000012799	snrpc	100	73.684	Pygocentrus_nattereri
ENSSPAG00000000914	snrpc	100	100.000	ENSSMAG00000008029	snrpc	100	100.000	Scophthalmus_maximus
ENSSPAG00000000914	snrpc	100	100.000	ENSSDUG00000018895	snrpc	81	100.000	Seriola_dumerili
ENSSPAG00000000914	snrpc	100	100.000	ENSSLDG00000005034	snrpc	100	100.000	Seriola_lalandi_dorsalis
ENSSPAG00000000914	snrpc	100	97.297	ENSTRUG00000021651	snrpc	100	97.297	Takifugu_rubripes
ENSSPAG00000000914	snrpc	100	88.272	ENSTNIG00000018307	snrpc	100	88.272	Tetraodon_nigroviridis
ENSSPAG00000000914	snrpc	100	98.649	ENSXMAG00000017935	snrpc	100	98.649	Xiphophorus_maculatus