EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000000927 (Gene tree)
Gene ID: 103367842
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 3522 bases
Position: chrKK580071.1:956589-960110
Accession: 103367842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000001233	zf-C2H2	PF00096.26	1.1e-10	1	3
ENSSPAP00000001233	zf-C2H2	PF00096.26	1.1e-10	2	3
ENSSPAP00000001233	zf-C2H2	PF00096.26	1.1e-10	3	3
ENSSPAP00000001233	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000001254	-	1280	XM_008296035	ENSSPAP00000001233	361 (aa)	XP_008294257	-

Gene Model

Click here to download ENSSPAG00000000927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000000927's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000000927	gfi1aa	94	85.965	ENSSPAG00000022914	gfi1b	51	85.965
ENSSPAG00000000927	gfi1aa	55	40.909	ENSSPAG00000009587	-	92	40.909
ENSSPAG00000000927	gfi1aa	71	84.848	ENSSPAG00000009140	gfi1ab	81	87.500
ENSSPAG00000000927	gfi1aa	60	40.909	ENSSPAG00000008485	-	84	40.909
ENSSPAG00000000927	gfi1aa	53	35.780	ENSSPAG00000022061	snai2	77	35.780
ENSSPAG00000000927	gfi1aa	69	39.450	ENSSPAG00000013118	-	81	39.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000000927	gfi1aa	94	97.654	ENSAPOG00000005043	gfi1aa	98	97.654	Acanthochromis_polyacanthus
ENSSPAG00000000927	gfi1aa	94	85.337	ENSACIG00000021378	gfi1aa	98	85.337	Amphilophus_citrinellus
ENSSPAG00000000927	gfi1aa	94	96.481	ENSAOCG00000022957	gfi1aa	98	96.481	Amphiprion_ocellaris
ENSSPAG00000000927	gfi1aa	94	96.774	ENSAPEG00000014539	gfi1aa	98	96.774	Amphiprion_percula
ENSSPAG00000000927	gfi1aa	94	84.211	ENSATEG00000019026	gfi1aa	81	91.892	Anabas_testudineus
ENSSPAG00000000927	gfi1aa	94	87.097	ENSACLG00000008641	gfi1aa	85	87.097	Astatotilapia_calliptera
ENSSPAG00000000927	gfi1aa	94	58.430	ENSDARG00000020746	gfi1aa	85	57.880	Danio_rerio
ENSSPAG00000000927	gfi1aa	94	83.578	ENSHBUG00000007389	gfi1aa	85	83.284	Haplochromis_burtoni
ENSSPAG00000000927	gfi1aa	94	76.540	ENSKMAG00000002148	gfi1aa	85	76.522	Kryptolebias_marmoratus
ENSSPAG00000000927	gfi1aa	94	78.779	ENSLBEG00000006603	gfi1aa	85	78.779	Labrus_bergylta
ENSSPAG00000000927	gfi1aa	94	80.702	ENSMAMG00000004896	gfi1aa	85	78.947	Mastacembelus_armatus
ENSSPAG00000000927	gfi1aa	94	87.097	ENSMZEG00005004578	gfi1aa	85	87.097	Maylandia_zebra
ENSSPAG00000000927	gfi1aa	75	78.378	ENSMMOG00000006167	gfi1aa	97	78.378	Mola_mola
ENSSPAG00000000927	gfi1aa	94	86.804	ENSNBRG00000002673	gfi1aa	85	86.804	Neolamprologus_brichardi
ENSSPAG00000000927	gfi1aa	94	84.164	ENSPNYG00000002189	gfi1aa	85	84.164	Pundamilia_nyererei
ENSSPAG00000000927	gfi1aa	94	78.797	ENSSMAG00000006797	gfi1aa	86	79.370	Scophthalmus_maximus
ENSSPAG00000000927	gfi1aa	94	88.372	ENSSDUG00000011654	gfi1aa	86	88.372	Seriola_dumerili
ENSSPAG00000000927	gfi1aa	94	83.768	ENSSLDG00000016512	gfi1aa	85	83.768	Seriola_lalandi_dorsalis
ENSSPAG00000000927	gfi1aa	94	79.883	ENSTRUG00000004744	gfi1aa	86	79.883	Takifugu_rubripes