EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPAG00000000934 (Gene tree)
Gene ID
103364885
Gene Symbol
lsm3
Alias
-
Full Name
LSM3 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Stegastes_partitus
Status
putative
Strand
Minus strand
Length
3393 bases
Position
chrKK580860.1:156514-159906
Accession
103364885
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPAP00000001215LSMPF01423.222.1e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPAT00000001236-300XM_008292171ENSSPAP0000000121599 (aa)XP_008290393UPI0004960DB4
Gene Model
Click here to download ENSSPAG00000000934's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000000934's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPAG00000000934lsm37731.707ENSSPAG00000015767snrpd26930.233
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPAG00000000934lsm310084.314ENSG00000170860LSM310084.314Homo_sapiens
ENSSPAG00000000934lsm310087.255ENSAPOG00000018947lsm310087.255Acanthochromis_polyacanthus
ENSSPAG00000000934lsm310084.314ENSAMEG00000009405LSM310084.314Ailuropoda_melanoleuca
ENSSPAG00000000934lsm310086.275ENSACIG00000004574lsm37186.275Amphilophus_citrinellus
ENSSPAG00000000934lsm310087.255ENSAOCG00000007658lsm310087.255Amphiprion_ocellaris
ENSSPAG00000000934lsm310087.255ENSAPEG00000018621lsm310087.255Amphiprion_percula
ENSSPAG00000000934lsm310087.255ENSATEG00000005153lsm310087.255Anabas_testudineus
ENSSPAG00000000934lsm39385.263ENSAPLG00000014499LSM310085.263Anas_platyrhynchos
ENSSPAG00000000934lsm310085.294ENSACAG00000013503LSM310085.294Anolis_carolinensis
ENSSPAG00000000934lsm310081.373ENSANAG00000002903-10081.373Aotus_nancymaae
ENSSPAG00000000934lsm310084.314ENSANAG00000034627LSM310084.314Aotus_nancymaae
ENSSPAG00000000934lsm39586.598ENSACLG00000001726-9486.598Astatotilapia_calliptera
ENSSPAG00000000934lsm310086.275ENSAMXG00000041214lsm310086.275Astyanax_mexicanus
ENSSPAG00000000934lsm39485.417ENSBTAG00000007363LSM310085.417Bos_taurus
ENSSPAG00000000934lsm310062.745WBGene00003077lsm-310062.745Caenorhabditis_elegans
ENSSPAG00000000934lsm310082.353ENSCAFG00000001760LSM310082.353Canis_familiaris
ENSSPAG00000000934lsm310082.353ENSCAFG00020021584-10082.353Canis_lupus_dingo
ENSSPAG00000000934lsm310081.373ENSCAFG00020026452-10081.373Canis_lupus_dingo
ENSSPAG00000000934lsm310081.818ENSCAFG00020016680-10081.818Canis_lupus_dingo
ENSSPAG00000000934lsm310083.333ENSCAFG00020017266-10083.333Canis_lupus_dingo
ENSSPAG00000000934lsm310074.766ENSCAFG00020020950-10074.766Canis_lupus_dingo
ENSSPAG00000000934lsm310084.314ENSCHIG00000024650LSM310084.314Capra_hircus
ENSSPAG00000000934lsm39966.337ENSTSYG00000028528-9966.337Carlito_syrichta
ENSSPAG00000000934lsm310085.294ENSTSYG00000005204-10085.294Carlito_syrichta
ENSSPAG00000000934lsm39485.417ENSCAPG00000015760LSM310085.417Cavia_aperea
ENSSPAG00000000934lsm310084.314ENSCPOG00000034071LSM310084.314Cavia_porcellus
ENSSPAG00000000934lsm310084.314ENSCCAG00000019503-10084.314Cebus_capucinus
ENSSPAG00000000934lsm310066.667ENSCCAG00000032763-10066.667Cebus_capucinus
ENSSPAG00000000934lsm310084.314ENSCCAG00000036499-10084.314Cebus_capucinus
ENSSPAG00000000934lsm39975.510ENSCATG00000031630-9975.510Cercocebus_atys
ENSSPAG00000000934lsm310084.314ENSCATG00000039421LSM310084.314Cercocebus_atys
ENSSPAG00000000934lsm310084.314ENSCLAG00000015997LSM310084.314Chinchilla_lanigera
ENSSPAG00000000934lsm310079.412ENSCSAG00000019525-10079.412Chlorocebus_sabaeus
ENSSPAG00000000934lsm310085.294ENSCPBG00000014531LSM310085.294Chrysemys_picta_bellii
ENSSPAG00000000934lsm310069.231ENSCSAVG00000009542-10069.231Ciona_savignyi
ENSSPAG00000000934lsm310082.353ENSCANG00000018782-10082.353Colobus_angolensis_palliatus
ENSSPAG00000000934lsm310081.373ENSCANG00000038037-10081.373Colobus_angolensis_palliatus
ENSSPAG00000000934lsm310084.314ENSCANG00000033944-10084.314Colobus_angolensis_palliatus
ENSSPAG00000000934lsm39876.289ENSCGRG00001011396-10076.289Cricetulus_griseus_chok1gshd
ENSSPAG00000000934lsm310084.314ENSCGRG00001017598Lsm310084.314Cricetulus_griseus_chok1gshd
ENSSPAG00000000934lsm310062.136ENSCGRG00001008639-10062.136Cricetulus_griseus_chok1gshd
ENSSPAG00000000934lsm310084.314ENSCGRG00000016159Lsm310084.314Cricetulus_griseus_crigri
ENSSPAG00000000934lsm39378.261ENSCGRG00000012129-10078.261Cricetulus_griseus_crigri
ENSSPAG00000000934lsm310087.255ENSCSEG00000015071lsm37787.255Cynoglossus_semilaevis
ENSSPAG00000000934lsm310086.275ENSCVAG00000006933lsm310086.275Cyprinodon_variegatus
ENSSPAG00000000934lsm310084.314ENSDARG00000089663lsm310084.314Danio_rerio
ENSSPAG00000000934lsm310084.314ENSDNOG00000030808LSM310084.314Dasypus_novemcinctus
ENSSPAG00000000934lsm310084.314ENSDORG00000006894-10084.314Dipodomys_ordii
ENSSPAG00000000934lsm310066.667ENSDORG00000024490-10066.667Dipodomys_ordii
ENSSPAG00000000934lsm310066.990FBgn0051184LSm310066.990Drosophila_melanogaster
ENSSPAG00000000934lsm310084.314ENSETEG00000016207LSM310084.314Echinops_telfairi
ENSSPAG00000000934lsm310076.471ENSEBUG00000004943lsm310076.471Eptatretus_burgeri
ENSSPAG00000000934lsm310084.314ENSEASG00005015443LSM310084.314Equus_asinus_asinus
ENSSPAG00000000934lsm310084.314ENSECAG00000007803LSM310084.314Equus_caballus
ENSSPAG00000000934lsm310086.275ENSELUG00000018922lsm310086.275Esox_lucius
ENSSPAG00000000934lsm310066.337ENSFCAG00000044344-10066.337Felis_catus
ENSSPAG00000000934lsm310084.314ENSFCAG00000038453LSM310084.314Felis_catus
ENSSPAG00000000934lsm310085.294ENSFALG00000012644LSM310085.294Ficedula_albicollis
ENSSPAG00000000934lsm310084.314ENSFDAG00000011470LSM310084.314Fukomys_damarensis
ENSSPAG00000000934lsm310087.255ENSFHEG00000000876lsm310087.255Fundulus_heteroclitus
ENSSPAG00000000934lsm39384.211ENSGMOG00000011024lsm310084.211Gadus_morhua
ENSSPAG00000000934lsm310087.255ENSGAFG00000013965lsm310087.255Gambusia_affinis
ENSSPAG00000000934lsm310087.255ENSGACG00000003488lsm310087.255Gasterosteus_aculeatus
ENSSPAG00000000934lsm310085.294ENSGAGG00000025707LSM310085.294Gopherus_agassizii
ENSSPAG00000000934lsm310084.314ENSGGOG00000010006LSM310084.314Gorilla_gorilla
ENSSPAG00000000934lsm310087.255ENSHBUG00000022399lsm310087.255Haplochromis_burtoni
ENSSPAG00000000934lsm310084.314ENSHGLG00000000651LSM310084.314Heterocephalus_glaber_female
ENSSPAG00000000934lsm310064.706ENSHGLG00000015564-10064.706Heterocephalus_glaber_female
ENSSPAG00000000934lsm310084.314ENSHGLG00100011343LSM310084.314Heterocephalus_glaber_male
ENSSPAG00000000934lsm310064.706ENSHGLG00100010658-10064.706Heterocephalus_glaber_male
ENSSPAG00000000934lsm310086.275ENSHCOG00000013481lsm310086.275Hippocampus_comes
ENSSPAG00000000934lsm310086.275ENSIPUG00000009207lsm310086.275Ictalurus_punctatus
ENSSPAG00000000934lsm310084.314ENSSTOG00000006842LSM310084.314Ictidomys_tridecemlineatus
ENSSPAG00000000934lsm310084.314ENSJJAG00000017351Lsm310084.314Jaculus_jaculus
ENSSPAG00000000934lsm39971.717ENSJJAG00000018311-10071.717Jaculus_jaculus
ENSSPAG00000000934lsm310081.818ENSJJAG00000012797-10081.818Jaculus_jaculus
ENSSPAG00000000934lsm310086.275ENSKMAG00000015182lsm310086.275Kryptolebias_marmoratus
ENSSPAG00000000934lsm39684.694ENSLBEG00000021292lsm310084.694Labrus_bergylta
ENSSPAG00000000934lsm310084.314ENSLOCG00000013560lsm310084.314Lepisosteus_oculatus
ENSSPAG00000000934lsm310083.495ENSLAFG00000023308LSM310083.495Loxodonta_africana
ENSSPAG00000000934lsm310084.314ENSMFAG00000003185LSM310084.314Macaca_fascicularis
ENSSPAG00000000934lsm310062.745ENSMMUG00000043596-10062.745Macaca_mulatta
ENSSPAG00000000934lsm39675.789ENSMMUG00000002294-9575.789Macaca_mulatta
ENSSPAG00000000934lsm310084.314ENSMMUG00000023126LSM310084.314Macaca_mulatta
ENSSPAG00000000934lsm39977.551ENSMNEG00000037686-9977.551Macaca_nemestrina
ENSSPAG00000000934lsm310084.314ENSMNEG00000043632LSM310084.314Macaca_nemestrina
ENSSPAG00000000934lsm310084.314ENSMLEG00000036162LSM310084.314Mandrillus_leucophaeus
ENSSPAG00000000934lsm310087.255ENSMAMG00000012807lsm310087.255Mastacembelus_armatus
ENSSPAG00000000934lsm310087.255ENSMZEG00005016682lsm37387.255Maylandia_zebra
ENSSPAG00000000934lsm39485.417ENSMGAG00000007776LSM310085.417Meleagris_gallopavo
ENSSPAG00000000934lsm310083.333ENSMICG00000032361-10083.333Microcebus_murinus
ENSSPAG00000000934lsm310071.569ENSMICG00000027821-10071.569Microcebus_murinus
ENSSPAG00000000934lsm310084.314ENSMOCG00000014269Lsm310084.314Microtus_ochrogaster
ENSSPAG00000000934lsm310086.275ENSMMOG00000020715lsm310086.275Mola_mola
ENSSPAG00000000934lsm310083.333ENSMODG00000007275LSM310083.333Monodelphis_domestica
ENSSPAG00000000934lsm310087.255ENSMALG00000006485lsm310087.255Monopterus_albus
ENSSPAG00000000934lsm310084.314ENSMUSG00000034192Lsm310084.314Mus_musculus
ENSSPAG00000000934lsm310084.314MGP_PahariEiJ_G0022402Lsm310084.314Mus_pahari
ENSSPAG00000000934lsm310084.314MGP_SPRETEiJ_G0029681Lsm310084.314Mus_spretus
ENSSPAG00000000934lsm36593.750ENSMPUG00000017256-7693.750Mustela_putorius_furo
ENSSPAG00000000934lsm39774.747ENSMPUG00000019120-9774.747Mustela_putorius_furo
ENSSPAG00000000934lsm310079.412ENSMLUG00000024700-10079.412Myotis_lucifugus
ENSSPAG00000000934lsm310084.314ENSMLUG00000010677LSM310084.314Myotis_lucifugus
ENSSPAG00000000934lsm38671.591ENSNGAG00000010207-9271.591Nannospalax_galili
ENSSPAG00000000934lsm310084.314ENSNGAG00000022450Lsm310084.314Nannospalax_galili
ENSSPAG00000000934lsm310059.804ENSNGAG00000013716-10059.804Nannospalax_galili
ENSSPAG00000000934lsm310087.255ENSNBRG00000014318lsm310087.255Neolamprologus_brichardi
ENSSPAG00000000934lsm310084.314ENSNLEG00000005079LSM310084.314Nomascus_leucogenys
ENSSPAG00000000934lsm310075.490ENSNLEG00000030229-10075.490Nomascus_leucogenys
ENSSPAG00000000934lsm310077.451ENSODEG00000019403-10077.451Octodon_degus
ENSSPAG00000000934lsm310083.333ENSODEG00000019158-10083.333Octodon_degus
ENSSPAG00000000934lsm310083.333ENSODEG00000019740-10083.333Octodon_degus
ENSSPAG00000000934lsm310084.314ENSODEG00000001726LSM310084.314Octodon_degus
ENSSPAG00000000934lsm310087.255ENSONIG00000021369-10087.255Oreochromis_niloticus
ENSSPAG00000000934lsm310087.255ENSONIG00000000370lsm310087.255Oreochromis_niloticus
ENSSPAG00000000934lsm310083.333ENSOANG00000012273LSM310083.333Ornithorhynchus_anatinus
ENSSPAG00000000934lsm310084.314ENSOCUG00000027653-10084.314Oryctolagus_cuniculus
ENSSPAG00000000934lsm310080.392ENSOCUG00000011088-10080.392Oryctolagus_cuniculus
ENSSPAG00000000934lsm310085.294ENSORLG00000025900lsm310085.294Oryzias_latipes
ENSSPAG00000000934lsm310085.294ENSORLG00020007125lsm310085.294Oryzias_latipes_hni
ENSSPAG00000000934lsm310085.294ENSORLG00015002944lsm310085.294Oryzias_latipes_hsok
ENSSPAG00000000934lsm310085.294ENSOMEG00000001915lsm310085.294Oryzias_melastigma
ENSSPAG00000000934lsm310084.314ENSOGAG00000007659-10084.314Otolemur_garnettii
ENSSPAG00000000934lsm39682.653ENSOGAG00000028858-10082.653Otolemur_garnettii
ENSSPAG00000000934lsm310081.000ENSOGAG00000033051-10081.000Otolemur_garnettii
ENSSPAG00000000934lsm310083.495ENSOARG00000000600LSM310083.495Ovis_aries
ENSSPAG00000000934lsm310084.314ENSPPAG00000034074LSM310084.314Pan_paniscus
ENSSPAG00000000934lsm39978.218ENSPPRG00000010610-8978.218Panthera_pardus
ENSSPAG00000000934lsm310084.314ENSPPRG00000012912-10084.314Panthera_pardus
ENSSPAG00000000934lsm310083.333ENSPPRG00000020953-10083.333Panthera_pardus
ENSSPAG00000000934lsm310084.314ENSPTIG00000003463-10084.314Panthera_tigris_altaica
ENSSPAG00000000934lsm310084.314ENSPTIG00000013072-10084.314Panthera_tigris_altaica
ENSSPAG00000000934lsm310084.314ENSPTRG00000014650LSM310084.314Pan_troglodytes
ENSSPAG00000000934lsm310063.725ENSPANG00000032192-10063.725Papio_anubis
ENSSPAG00000000934lsm310084.314ENSPANG00000009378LSM310084.314Papio_anubis
ENSSPAG00000000934lsm310086.275ENSPKIG00000008037lsm39186.275Paramormyrops_kingsleyae
ENSSPAG00000000934lsm310085.294ENSPSIG00000015720LSM310085.294Pelodiscus_sinensis
ENSSPAG00000000934lsm39583.505ENSPMGG00000012103lsm39883.505Periophthalmus_magnuspinnatus
ENSSPAG00000000934lsm310084.314ENSPEMG00000015797Lsm310084.314Peromyscus_maniculatus_bairdii
ENSSPAG00000000934lsm310068.627ENSPEMG00000020213-10068.627Peromyscus_maniculatus_bairdii
ENSSPAG00000000934lsm310087.255ENSPFOG00000008372lsm310087.255Poecilia_formosa
ENSSPAG00000000934lsm310087.255ENSPLAG00000000563lsm310087.255Poecilia_latipinna
ENSSPAG00000000934lsm310087.255ENSPMEG00000022052lsm310087.255Poecilia_mexicana
ENSSPAG00000000934lsm310087.255ENSPREG00000022485lsm310087.255Poecilia_reticulata
ENSSPAG00000000934lsm310084.314ENSPPYG00000013402LSM310084.314Pongo_abelii
ENSSPAG00000000934lsm310084.314ENSPCAG00000017077LSM310084.314Procavia_capensis
ENSSPAG00000000934lsm310083.333ENSPCOG00000016217-10083.333Propithecus_coquereli
ENSSPAG00000000934lsm39474.194ENSPCOG00000014435-9874.194Propithecus_coquereli
ENSSPAG00000000934lsm310084.314ENSPVAG00000016795LSM310084.314Pteropus_vampyrus
ENSSPAG00000000934lsm310087.255ENSPNYG00000009552lsm37387.255Pundamilia_nyererei
ENSSPAG00000000934lsm310086.275ENSPNAG00000023467lsm310086.275Pygocentrus_nattereri
ENSSPAG00000000934lsm310084.314ENSRNOG00000008733Lsm310084.314Rattus_norvegicus
ENSSPAG00000000934lsm310079.798ENSRBIG00000043783-10079.798Rhinopithecus_bieti
ENSSPAG00000000934lsm310084.314ENSRBIG00000034399LSM310084.314Rhinopithecus_bieti
ENSSPAG00000000934lsm310073.529ENSRROG00000044047-10073.529Rhinopithecus_roxellana
ENSSPAG00000000934lsm310084.314ENSRROG00000033276-10084.314Rhinopithecus_roxellana
ENSSPAG00000000934lsm310066.667ENSRROG00000044056-10066.667Rhinopithecus_roxellana
ENSSPAG00000000934lsm310080.808ENSRROG00000039868-10080.808Rhinopithecus_roxellana
ENSSPAG00000000934lsm310084.314ENSSBOG00000024310LSM310084.314Saimiri_boliviensis_boliviensis
ENSSPAG00000000934lsm310086.275ENSSFOG00015007071lsm310086.275Scleropages_formosus
ENSSPAG00000000934lsm310087.255ENSSMAG00000001818lsm310087.255Scophthalmus_maximus
ENSSPAG00000000934lsm310087.255ENSSDUG00000006040lsm310087.255Seriola_dumerili
ENSSPAG00000000934lsm310087.255ENSSLDG00000006399lsm310087.255Seriola_lalandi_dorsalis
ENSSPAG00000000934lsm35677.586ENSSARG00000005275-10077.586Sorex_araneus
ENSSPAG00000000934lsm39385.263ENSSPUG00000017047-9985.263Sphenodon_punctatus
ENSSPAG00000000934lsm310076.471ENSSPUG00000005394LSM310076.471Sphenodon_punctatus
ENSSPAG00000000934lsm310084.314ENSSSCG00000011601LSM310084.314Sus_scrofa
ENSSPAG00000000934lsm39568.041ENSSSCG00000023718-9968.041Sus_scrofa
ENSSPAG00000000934lsm310085.294ENSTGUG00000008327LSM310085.294Taeniopygia_guttata
ENSSPAG00000000934lsm310086.275ENSTRUG00000023175lsm310086.275Takifugu_rubripes
ENSSPAG00000000934lsm310086.275ENSTNIG00000005589lsm310086.275Tetraodon_nigroviridis
ENSSPAG00000000934lsm310074.510ENSTBEG00000001050-9974.510Tupaia_belangeri
ENSSPAG00000000934lsm310084.314ENSTTRG00000011197LSM310084.314Tursiops_truncatus
ENSSPAG00000000934lsm310084.314ENSUAMG00000017250-10084.314Ursus_americanus
ENSSPAG00000000934lsm310084.314ENSUMAG00000015905LSM310084.314Ursus_maritimus
ENSSPAG00000000934lsm39385.263ENSVPAG00000010709LSM310085.263Vicugna_pacos
ENSSPAG00000000934lsm310075.490ENSVVUG00000024228-10075.490Vulpes_vulpes
ENSSPAG00000000934lsm310079.412ENSVVUG00000006481-10079.412Vulpes_vulpes
ENSSPAG00000000934lsm310078.431ENSVVUG00000005684-10078.431Vulpes_vulpes
ENSSPAG00000000934lsm310081.373ENSVVUG00000007332-9181.373Vulpes_vulpes
ENSSPAG00000000934lsm310080.392ENSVVUG00000029294-10080.392Vulpes_vulpes
ENSSPAG00000000934lsm310084.314ENSXETG00000011534lsm310084.314Xenopus_tropicalis
ENSSPAG00000000934lsm310087.255ENSXCOG00000017432LSM310087.255Xiphophorus_couchianus
ENSSPAG00000000934lsm310087.255ENSXMAG00000009151lsm310087.255Xiphophorus_maculatus

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