EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000001217 (Gene tree)
Gene ID: 103355489
Gene Symbol: trub1
Alias: zgc:195155
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 6683 bases
Position: chrKK580225.1:461289-467971
Accession: 103355489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000001565	TruB_N	PF01509.18	9.2e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000001595	-	2901	XM_008279317	ENSSPAP00000001565	278 (aa)	XP_008277539	UPI00049613CD

Gene Model

Click here to download ENSSPAG00000001217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000001217's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000001217	trub1	71	32.000	ENSSPAG00000017865	trub2	60	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000001217	trub1	94	66.288	ENSG00000165832	TRUB1	76	66.288	Homo_sapiens
ENSSPAG00000001217	trub1	94	95.802	ENSAPOG00000020565	trub1	100	93.165	Acanthochromis_polyacanthus
ENSSPAG00000001217	trub1	94	66.038	ENSAMEG00000014931	TRUB1	75	66.038	Ailuropoda_melanoleuca
ENSSPAG00000001217	trub1	99	80.435	ENSACIG00000003060	trub1	92	80.435	Amphilophus_citrinellus
ENSSPAG00000001217	trub1	94	96.565	ENSAOCG00000017188	trub1	100	94.245	Amphiprion_ocellaris
ENSSPAG00000001217	trub1	94	96.183	ENSAPEG00000015209	trub1	100	93.885	Amphiprion_percula
ENSSPAG00000001217	trub1	88	88.980	ENSATEG00000023291	trub1	88	88.980	Anabas_testudineus
ENSSPAG00000001217	trub1	88	69.672	ENSAPLG00000006808	TRUB1	87	69.672	Anas_platyrhynchos
ENSSPAG00000001217	trub1	88	68.571	ENSACAG00000009282	TRUB1	88	68.571	Anolis_carolinensis
ENSSPAG00000001217	trub1	92	66.923	ENSANAG00000022870	TRUB1	74	66.923	Aotus_nancymaae
ENSSPAG00000001217	trub1	98	86.447	ENSACLG00000000823	trub1	100	85.252	Astatotilapia_calliptera
ENSSPAG00000001217	trub1	90	79.116	ENSAMXG00000015845	trub1	83	79.116	Astyanax_mexicanus
ENSSPAG00000001217	trub1	94	67.681	ENSBTAG00000012955	TRUB1	75	67.681	Bos_taurus
ENSSPAG00000001217	trub1	92	66.923	ENSCJAG00000047815	TRUB1	74	66.923	Callithrix_jacchus
ENSSPAG00000001217	trub1	94	66.920	ENSCAFG00000011688	TRUB1	75	66.920	Canis_familiaris
ENSSPAG00000001217	trub1	94	66.920	ENSCAFG00020013237	TRUB1	75	66.920	Canis_lupus_dingo
ENSSPAG00000001217	trub1	94	66.920	ENSCHIG00000020884	TRUB1	79	66.920	Capra_hircus
ENSSPAG00000001217	trub1	94	66.540	ENSTSYG00000000446	TRUB1	75	66.540	Carlito_syrichta
ENSSPAG00000001217	trub1	81	60.088	ENSCAPG00000017088	TRUB1	89	60.088	Cavia_aperea
ENSSPAG00000001217	trub1	67	65.591	ENSCPOG00000030129	-	72	65.591	Cavia_porcellus
ENSSPAG00000001217	trub1	66	66.667	ENSCPOG00000040236	-	75	66.667	Cavia_porcellus
ENSSPAG00000001217	trub1	92	66.923	ENSCCAG00000028842	TRUB1	74	66.923	Cebus_capucinus
ENSSPAG00000001217	trub1	92	66.923	ENSCATG00000033431	TRUB1	74	66.923	Cercocebus_atys
ENSSPAG00000001217	trub1	66	65.574	ENSCLAG00000008664	TRUB1	75	65.574	Chinchilla_lanigera
ENSSPAG00000001217	trub1	92	66.923	ENSCSAG00000004891	TRUB1	74	66.923	Chlorocebus_sabaeus
ENSSPAG00000001217	trub1	87	61.728	ENSCHOG00000011931	TRUB1	70	61.728	Choloepus_hoffmanni
ENSSPAG00000001217	trub1	88	72.245	ENSCPBG00000003051	TRUB1	84	72.245	Chrysemys_picta_bellii
ENSSPAG00000001217	trub1	92	66.923	ENSCANG00000029445	TRUB1	74	66.923	Colobus_angolensis_palliatus
ENSSPAG00000001217	trub1	90	59.127	ENSCGRG00001010322	-	69	58.301	Cricetulus_griseus_chok1gshd
ENSSPAG00000001217	trub1	80	67.257	ENSCGRG00001016772	-	76	67.105	Cricetulus_griseus_chok1gshd
ENSSPAG00000001217	trub1	90	67.063	ENSCGRG00000010806	Trub1	79	66.409	Cricetulus_griseus_crigri
ENSSPAG00000001217	trub1	94	77.011	ENSCSEG00000011261	trub1	87	75.746	Cynoglossus_semilaevis
ENSSPAG00000001217	trub1	90	83.600	ENSCVAG00000008791	trub1	77	83.600	Cyprinodon_variegatus
ENSSPAG00000001217	trub1	90	75.502	ENSDARG00000053805	trub1	99	85.294	Danio_rerio
ENSSPAG00000001217	trub1	94	64.394	ENSDNOG00000001069	TRUB1	75	64.394	Dasypus_novemcinctus
ENSSPAG00000001217	trub1	90	66.403	ENSDORG00000010431	Trub1	76	65.399	Dipodomys_ordii
ENSSPAG00000001217	trub1	70	66.423	ENSETEG00000009183	TRUB1	56	66.423	Echinops_telfairi
ENSSPAG00000001217	trub1	94	66.540	ENSEASG00005014739	TRUB1	75	66.540	Equus_asinus_asinus
ENSSPAG00000001217	trub1	94	66.540	ENSECAG00000007177	TRUB1	75	66.540	Equus_caballus
ENSSPAG00000001217	trub1	94	58.935	ENSEEUG00000013993	TRUB1	77	56.835	Erinaceus_europaeus
ENSSPAG00000001217	trub1	96	79.699	ENSELUG00000000502	trub1	93	79.699	Esox_lucius
ENSSPAG00000001217	trub1	94	66.920	ENSFCAG00000031927	TRUB1	75	66.920	Felis_catus
ENSSPAG00000001217	trub1	83	67.100	ENSFALG00000002232	TRUB1	89	67.100	Ficedula_albicollis
ENSSPAG00000001217	trub1	66	66.667	ENSFDAG00000008140	TRUB1	75	66.667	Fukomys_damarensis
ENSSPAG00000001217	trub1	99	80.797	ENSFHEG00000004016	trub1	95	80.797	Fundulus_heteroclitus
ENSSPAG00000001217	trub1	89	68.016	ENSGALG00000009091	TRUB1	87	68.016	Gallus_gallus
ENSSPAG00000001217	trub1	92	82.031	ENSGAFG00000009193	trub1	89	80.859	Gambusia_affinis
ENSSPAG00000001217	trub1	76	85.308	ENSGACG00000015387	trub1	100	85.308	Gasterosteus_aculeatus
ENSSPAG00000001217	trub1	93	69.498	ENSGAGG00000009758	TRUB1	70	72.245	Gopherus_agassizii
ENSSPAG00000001217	trub1	94	66.288	ENSGGOG00000004583	TRUB1	76	66.288	Gorilla_gorilla
ENSSPAG00000001217	trub1	98	86.447	ENSHBUG00000016787	trub1	100	85.252	Haplochromis_burtoni
ENSSPAG00000001217	trub1	94	64.259	ENSHGLG00000015314	TRUB1	75	64.259	Heterocephalus_glaber_female
ENSSPAG00000001217	trub1	66	66.120	ENSHGLG00100009183	TRUB1	77	66.120	Heterocephalus_glaber_male
ENSSPAG00000001217	trub1	99	82.545	ENSHCOG00000017877	trub1	100	82.014	Hippocampus_comes
ENSSPAG00000001217	trub1	90	77.912	ENSIPUG00000017559	trub1	88	77.912	Ictalurus_punctatus
ENSSPAG00000001217	trub1	94	65.385	ENSSTOG00000003641	TRUB1	79	65.385	Ictidomys_tridecemlineatus
ENSSPAG00000001217	trub1	94	65.399	ENSJJAG00000011800	Trub1	77	65.399	Jaculus_jaculus
ENSSPAG00000001217	trub1	100	83.453	ENSKMAG00000006232	trub1	100	83.453	Kryptolebias_marmoratus
ENSSPAG00000001217	trub1	99	85.921	ENSLBEG00000026722	trub1	97	85.921	Labrus_bergylta
ENSSPAG00000001217	trub1	93	71.042	ENSLACG00000014885	TRUB1	86	71.042	Latimeria_chalumnae
ENSSPAG00000001217	trub1	94	75.191	ENSLOCG00000012979	trub1	88	75.191	Lepisosteus_oculatus
ENSSPAG00000001217	trub1	91	67.451	ENSLAFG00000015452	TRUB1	79	64.621	Loxodonta_africana
ENSSPAG00000001217	trub1	92	66.923	ENSMFAG00000031767	TRUB1	74	66.923	Macaca_fascicularis
ENSSPAG00000001217	trub1	92	66.923	ENSMMUG00000001902	TRUB1	74	66.923	Macaca_mulatta
ENSSPAG00000001217	trub1	92	61.923	ENSMNEG00000044646	TRUB1	74	62.308	Macaca_nemestrina
ENSSPAG00000001217	trub1	92	66.923	ENSMLEG00000042655	TRUB1	74	66.923	Mandrillus_leucophaeus
ENSSPAG00000001217	trub1	98	86.447	ENSMZEG00005024095	trub1	100	85.252	Maylandia_zebra
ENSSPAG00000001217	trub1	89	68.421	ENSMGAG00000011135	TRUB1	85	68.421	Meleagris_gallopavo
ENSSPAG00000001217	trub1	86	66.946	ENSMAUG00000011101	Trub1	72	66.260	Mesocricetus_auratus
ENSSPAG00000001217	trub1	94	66.160	ENSMICG00000016324	TRUB1	75	66.160	Microcebus_murinus
ENSSPAG00000001217	trub1	90	67.063	ENSMOCG00000017759	Trub1	78	66.409	Microtus_ochrogaster
ENSSPAG00000001217	trub1	88	70.492	ENSMODG00000009676	TRUB1	69	69.076	Monodelphis_domestica
ENSSPAG00000001217	trub1	87	69.421	MGP_CAROLIEiJ_G0023100	Trub1	76	67.914	Mus_caroli
ENSSPAG00000001217	trub1	87	68.595	ENSMUSG00000025086	Trub1	76	66.845	Mus_musculus
ENSSPAG00000001217	trub1	88	67.886	MGP_PahariEiJ_G0014588	Trub1	73	67.886	Mus_pahari
ENSSPAG00000001217	trub1	87	68.595	MGP_SPRETEiJ_G0024021	Trub1	76	66.845	Mus_spretus
ENSSPAG00000001217	trub1	94	66.540	ENSMPUG00000003556	TRUB1	75	66.540	Mustela_putorius_furo
ENSSPAG00000001217	trub1	94	65.530	ENSMLUG00000017686	TRUB1	78	65.530	Myotis_lucifugus
ENSSPAG00000001217	trub1	93	66.031	ENSNGAG00000018682	Trub1	75	66.031	Nannospalax_galili
ENSSPAG00000001217	trub1	91	90.514	ENSNBRG00000023393	trub1	90	90.514	Neolamprologus_brichardi
ENSSPAG00000001217	trub1	94	66.288	ENSNLEG00000016345	TRUB1	76	66.288	Nomascus_leucogenys
ENSSPAG00000001217	trub1	72	70.647	ENSMEUG00000006603	TRUB1	76	68.932	Notamacropus_eugenii
ENSSPAG00000001217	trub1	94	65.779	ENSOPRG00000009371	TRUB1	76	65.779	Ochotona_princeps
ENSSPAG00000001217	trub1	94	64.639	ENSODEG00000010854	TRUB1	75	64.639	Octodon_degus
ENSSPAG00000001217	trub1	98	86.447	ENSONIG00000007249	trub1	99	86.447	Oreochromis_niloticus
ENSSPAG00000001217	trub1	89	69.636	ENSOANG00000001556	TRUB1	82	69.636	Ornithorhynchus_anatinus
ENSSPAG00000001217	trub1	94	65.779	ENSOCUG00000009456	TRUB1	76	65.779	Oryctolagus_cuniculus
ENSSPAG00000001217	trub1	93	84.556	ENSORLG00000029719	trub1	93	84.556	Oryzias_latipes
ENSSPAG00000001217	trub1	93	84.556	ENSORLG00020016767	trub1	92	84.556	Oryzias_latipes_hni
ENSSPAG00000001217	trub1	99	81.091	ENSORLG00015014728	trub1	98	81.091	Oryzias_latipes_hsok
ENSSPAG00000001217	trub1	93	82.239	ENSOMEG00000014556	trub1	91	82.239	Oryzias_melastigma
ENSSPAG00000001217	trub1	93	66.794	ENSOGAG00000015895	TRUB1	75	66.794	Otolemur_garnettii
ENSSPAG00000001217	trub1	94	65.556	ENSOARG00000015591	TRUB1	77	65.556	Ovis_aries
ENSSPAG00000001217	trub1	94	66.288	ENSPPAG00000043645	TRUB1	76	66.288	Pan_paniscus
ENSSPAG00000001217	trub1	94	66.920	ENSPPRG00000007096	TRUB1	75	66.920	Panthera_pardus
ENSSPAG00000001217	trub1	94	66.920	ENSPTIG00000006378	TRUB1	75	66.920	Panthera_tigris_altaica
ENSSPAG00000001217	trub1	94	66.288	ENSPTRG00000002964	TRUB1	76	66.288	Pan_troglodytes
ENSSPAG00000001217	trub1	92	66.923	ENSPANG00000020712	TRUB1	74	66.923	Papio_anubis
ENSSPAG00000001217	trub1	60	80.357	ENSPKIG00000003852	trub1	72	80.357	Paramormyrops_kingsleyae
ENSSPAG00000001217	trub1	88	71.545	ENSPSIG00000012877	TRUB1	84	71.545	Pelodiscus_sinensis
ENSSPAG00000001217	trub1	99	77.617	ENSPMGG00000000075	trub1	96	77.617	Periophthalmus_magnuspinnatus
ENSSPAG00000001217	trub1	92	66.409	ENSPEMG00000011156	Trub1	76	66.409	Peromyscus_maniculatus_bairdii
ENSSPAG00000001217	trub1	88	70.492	ENSPCIG00000009729	TRUB1	68	69.076	Phascolarctos_cinereus
ENSSPAG00000001217	trub1	95	83.019	ENSPFOG00000009950	trub1	100	80.657	Poecilia_formosa
ENSSPAG00000001217	trub1	100	80.216	ENSPLAG00000013855	trub1	97	80.216	Poecilia_latipinna
ENSSPAG00000001217	trub1	100	80.576	ENSPMEG00000009064	trub1	100	80.576	Poecilia_mexicana
ENSSPAG00000001217	trub1	100	80.216	ENSPREG00000003343	trub1	100	80.216	Poecilia_reticulata
ENSSPAG00000001217	trub1	94	65.909	ENSPPYG00000002676	TRUB1	76	65.909	Pongo_abelii
ENSSPAG00000001217	trub1	92	61.390	ENSPCAG00000008427	TRUB1	74	61.390	Procavia_capensis
ENSSPAG00000001217	trub1	94	61.217	ENSPCOG00000024360	TRUB1	74	60.456	Propithecus_coquereli
ENSSPAG00000001217	trub1	73	69.307	ENSPVAG00000007575	TRUB1	77	69.307	Pteropus_vampyrus
ENSSPAG00000001217	trub1	98	86.081	ENSPNYG00000018614	trub1	100	84.892	Pundamilia_nyererei
ENSSPAG00000001217	trub1	90	68.273	ENSPNAG00000006881	trub1	80	67.470	Pygocentrus_nattereri
ENSSPAG00000001217	trub1	92	65.251	ENSRNOG00000017321	Trub1	72	67.073	Rattus_norvegicus
ENSSPAG00000001217	trub1	92	59.615	ENSRBIG00000033423	TRUB1	72	59.615	Rhinopithecus_bieti
ENSSPAG00000001217	trub1	92	66.923	ENSRROG00000033902	TRUB1	74	66.923	Rhinopithecus_roxellana
ENSSPAG00000001217	trub1	92	66.923	ENSSBOG00000024237	TRUB1	74	66.923	Saimiri_boliviensis_boliviensis
ENSSPAG00000001217	trub1	76	71.028	ENSSHAG00000009346	TRUB1	72	71.028	Sarcophilus_harrisii
ENSSPAG00000001217	trub1	98	73.993	ENSSFOG00015022124	trub1	93	73.993	Scleropages_formosus
ENSSPAG00000001217	trub1	100	84.892	ENSSMAG00000001020	trub1	98	84.892	Scophthalmus_maximus
ENSSPAG00000001217	trub1	100	84.892	ENSSDUG00000016414	trub1	100	84.892	Seriola_dumerili
ENSSPAG00000001217	trub1	100	84.892	ENSSLDG00000015486	trub1	100	84.892	Seriola_lalandi_dorsalis
ENSSPAG00000001217	trub1	94	68.821	ENSSPUG00000001642	TRUB1	90	68.821	Sphenodon_punctatus
ENSSPAG00000001217	trub1	94	66.540	ENSSSCG00000010653	TRUB1	77	66.540	Sus_scrofa
ENSSPAG00000001217	trub1	94	67.308	ENSTGUG00000010971	TRUB1	92	67.308	Taeniopygia_guttata
ENSSPAG00000001217	trub1	81	57.642	ENSTBEG00000002880	TRUB1	90	57.642	Tupaia_belangeri
ENSSPAG00000001217	trub1	73	68.812	ENSTTRG00000005767	TRUB1	77	68.812	Tursiops_truncatus
ENSSPAG00000001217	trub1	94	66.920	ENSUAMG00000024876	TRUB1	75	66.920	Ursus_americanus
ENSSPAG00000001217	trub1	94	66.920	ENSUMAG00000002411	TRUB1	78	66.920	Ursus_maritimus
ENSSPAG00000001217	trub1	94	66.920	ENSVPAG00000005507	TRUB1	75	66.920	Vicugna_pacos
ENSSPAG00000001217	trub1	94	66.920	ENSVVUG00000010085	TRUB1	63	66.920	Vulpes_vulpes
ENSSPAG00000001217	trub1	88	68.163	ENSXETG00000023828	trub1	88	68.163	Xenopus_tropicalis
ENSSPAG00000001217	trub1	87	86.364	ENSXCOG00000017847	trub1	86	86.364	Xiphophorus_couchianus
ENSSPAG00000001217	trub1	100	80.576	ENSXMAG00000014701	trub1	100	80.576	Xiphophorus_maculatus