EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000001257 (Gene tree)
Gene ID: 103360480
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 34711 bases
Position: chrKK580515.1:26686-61396
Accession: 103360480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000001724	RRM_1	PF00076.22	2.4e-39	1	3
ENSSPAP00000001724	RRM_1	PF00076.22	2.4e-39	2	3
ENSSPAP00000001724	RRM_1	PF00076.22	2.4e-39	3	3
ENSSPAP00000001710	RRM_1	PF00076.22	2.6e-39	1	3
ENSSPAP00000001710	RRM_1	PF00076.22	2.6e-39	2	3
ENSSPAP00000001710	RRM_1	PF00076.22	2.6e-39	3	3
ENSSPAP00000001749	RRM_1	PF00076.22	3.5e-39	1	3
ENSSPAP00000001749	RRM_1	PF00076.22	3.5e-39	2	3
ENSSPAP00000001749	RRM_1	PF00076.22	3.5e-39	3	3
ENSSPAP00000001688	RRM_1	PF00076.22	4e-39	1	3
ENSSPAP00000001688	RRM_1	PF00076.22	4e-39	2	3
ENSSPAP00000001688	RRM_1	PF00076.22	4e-39	3	3
ENSSPAP00000001671	RRM_1	PF00076.22	4.4e-39	1	3
ENSSPAP00000001671	RRM_1	PF00076.22	4.4e-39	2	3
ENSSPAP00000001671	RRM_1	PF00076.22	4.4e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000001740	-	5567	XM_008286246	ENSSPAP00000001710	545 (aa)	XP_008284468	UPI000496817A
ENSSPAT00000001756	-	5543	-	ENSSPAP00000001724	537 (aa)	-	-
ENSSPAT00000001718	-	5753	XM_008286245	ENSSPAP00000001688	607 (aa)	XP_008284467	UPI00049560E2
ENSSPAT00000001701	-	5777	XM_008286239	ENSSPAP00000001671	615 (aa)	XP_008284461	UPI0004967816
ENSSPAT00000001781	-	1767	-	ENSSPAP00000001749	588 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000001257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000001257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000001257	rbm47	55	52.649	ENSSPAG00000000759	syncrip	67	43.990
ENSSPAG00000001257	rbm47	58	54.313	ENSSPAG00000003788	hnrnpr	68	45.794
ENSSPAG00000001257	rbm47	56	65.894	ENSSPAG00000013697	rbm46	68	66.887
ENSSPAG00000001257	rbm47	55	53.642	ENSSPAG00000018946	syncripl	73	47.030

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000001257	rbm47	100	82.181	ENSG00000163694	RBM47	100	86.636	Homo_sapiens
ENSSPAG00000001257	rbm47	100	98.741	ENSAPOG00000011062	rbm47	100	98.715	Acanthochromis_polyacanthus
ENSSPAG00000001257	rbm47	93	85.070	ENSAMEG00000009672	RBM47	100	77.778	Ailuropoda_melanoleuca
ENSSPAG00000001257	rbm47	100	96.774	ENSACIG00000011531	rbm47	100	96.774	Amphilophus_citrinellus
ENSSPAG00000001257	rbm47	100	98.489	ENSAOCG00000022245	rbm47	100	98.489	Amphiprion_ocellaris
ENSSPAG00000001257	rbm47	100	98.489	ENSAPEG00000018304	rbm47	100	98.489	Amphiprion_percula
ENSSPAG00000001257	rbm47	100	97.172	ENSATEG00000018400	rbm47	100	97.172	Anabas_testudineus
ENSSPAG00000001257	rbm47	100	78.000	ENSAPLG00000013974	RBM47	100	77.833	Anas_platyrhynchos
ENSSPAG00000001257	rbm47	100	78.517	ENSACAG00000011833	RBM47	100	77.076	Anolis_carolinensis
ENSSPAG00000001257	rbm47	100	83.733	ENSANAG00000029440	RBM47	100	82.353	Aotus_nancymaae
ENSSPAG00000001257	rbm47	100	94.602	ENSACLG00000016902	rbm47	100	94.602	Astatotilapia_calliptera
ENSSPAG00000001257	rbm47	97	86.482	ENSAMXG00000021794	rbm47	100	86.701	Astyanax_mexicanus
ENSSPAG00000001257	rbm47	100	80.612	ENSBTAG00000002356	RBM47	100	79.195	Bos_taurus
ENSSPAG00000001257	rbm47	98	84.807	ENSCJAG00000019385	RBM47	100	82.353	Callithrix_jacchus
ENSSPAG00000001257	rbm47	93	85.269	ENSCAFG00000015898	RBM47	100	77.926	Canis_familiaris
ENSSPAG00000001257	rbm47	83	80.244	ENSCAFG00020010558	RBM47	94	83.024	Canis_lupus_dingo
ENSSPAG00000001257	rbm47	100	80.612	ENSCHIG00000026214	RBM47	100	79.195	Capra_hircus
ENSSPAG00000001257	rbm47	84	86.547	ENSTSYG00000033612	RBM47	93	85.398	Carlito_syrichta
ENSSPAG00000001257	rbm47	100	73.077	ENSCAPG00000008426	RBM47	100	72.773	Cavia_aperea
ENSSPAG00000001257	rbm47	100	83.024	ENSCPOG00000014100	RBM47	100	78.523	Cavia_porcellus
ENSSPAG00000001257	rbm47	99	56.397	ENSCCAG00000024397	-	99	56.734	Cebus_capucinus
ENSSPAG00000001257	rbm47	100	84.800	ENSCCAG00000030129	-	100	82.097	Cebus_capucinus
ENSSPAG00000001257	rbm47	100	82.181	ENSCATG00000042064	RBM47	100	82.653	Cercocebus_atys
ENSSPAG00000001257	rbm47	100	82.493	ENSCLAG00000001684	RBM47	100	85.443	Chinchilla_lanigera
ENSSPAG00000001257	rbm47	93	85.593	ENSCSAG00000017060	RBM47	100	78.833	Chlorocebus_sabaeus
ENSSPAG00000001257	rbm47	89	75.225	ENSCHOG00000011731	RBM47	88	77.978	Choloepus_hoffmanni
ENSSPAG00000001257	rbm47	100	83.418	ENSCPBG00000013831	RBM47	100	80.699	Chrysemys_picta_bellii
ENSSPAG00000001257	rbm47	100	83.333	ENSCANG00000019997	RBM47	100	82.653	Colobus_angolensis_palliatus
ENSSPAG00000001257	rbm47	100	83.245	ENSCGRG00001000623	-	100	77.371	Cricetulus_griseus_chok1gshd
ENSSPAG00000001257	rbm47	100	78.249	ENSCGRG00001020102	-	100	79.841	Cricetulus_griseus_chok1gshd
ENSSPAG00000001257	rbm47	100	77.984	ENSCGRG00000014760	-	100	79.576	Cricetulus_griseus_crigri
ENSSPAG00000001257	rbm47	100	79.198	ENSCGRG00000007762	-	100	82.911	Cricetulus_griseus_crigri
ENSSPAG00000001257	rbm47	100	92.373	ENSCSEG00000004545	rbm47	100	92.373	Cynoglossus_semilaevis
ENSSPAG00000001257	rbm47	100	95.373	ENSCVAG00000020144	rbm47	100	95.373	Cyprinodon_variegatus
ENSSPAG00000001257	rbm47	100	86.957	ENSDARG00000061985	rbm47	100	87.468	Danio_rerio
ENSSPAG00000001257	rbm47	93	86.517	ENSDNOG00000046854	RBM47	100	79.125	Dasypus_novemcinctus
ENSSPAG00000001257	rbm47	100	80.506	ENSDORG00000010144	Rbm47	100	78.239	Dipodomys_ordii
ENSSPAG00000001257	rbm47	93	83.520	ENSETEG00000009194	RBM47	100	78.702	Echinops_telfairi
ENSSPAG00000001257	rbm47	99	58.375	ENSEBUG00000011912	rbm47	95	74.928	Eptatretus_burgeri
ENSSPAG00000001257	rbm47	93	86.236	ENSEASG00005008443	RBM47	100	79.362	Equus_asinus_asinus
ENSSPAG00000001257	rbm47	93	86.236	ENSECAG00000004400	RBM47	100	79.362	Equus_caballus
ENSSPAG00000001257	rbm47	70	90.000	ENSEEUG00000001194	RBM47	75	86.580	Erinaceus_europaeus
ENSSPAG00000001257	rbm47	100	90.127	ENSELUG00000006148	rbm47	100	90.127	Esox_lucius
ENSSPAG00000001257	rbm47	93	85.070	ENSFCAG00000012399	RBM47	100	79.798	Felis_catus
ENSSPAG00000001257	rbm47	100	83.163	ENSFALG00000002861	RBM47	100	80.500	Ficedula_albicollis
ENSSPAG00000001257	rbm47	100	82.493	ENSFDAG00000016326	RBM47	100	77.685	Fukomys_damarensis
ENSSPAG00000001257	rbm47	100	93.059	ENSFHEG00000007938	rbm47	100	91.497	Fundulus_heteroclitus
ENSSPAG00000001257	rbm47	100	89.594	ENSGMOG00000014802	rbm47	100	89.594	Gadus_morhua
ENSSPAG00000001257	rbm47	72	83.461	ENSGALG00000014267	RBM47	99	86.508	Gallus_gallus
ENSSPAG00000001257	rbm47	72	89.487	ENSGAFG00000020571	rbm47	98	93.784	Gambusia_affinis
ENSSPAG00000001257	rbm47	100	94.087	ENSGACG00000016223	rbm47	100	94.087	Gasterosteus_aculeatus
ENSSPAG00000001257	rbm47	100	83.418	ENSGAGG00000020051	RBM47	100	80.699	Gopherus_agassizii
ENSSPAG00000001257	rbm47	100	82.181	ENSGGOG00000001367	RBM47	100	82.653	Gorilla_gorilla
ENSSPAG00000001257	rbm47	100	94.602	ENSHBUG00000003520	rbm47	100	94.602	Haplochromis_burtoni
ENSSPAG00000001257	rbm47	100	61.183	ENSHGLG00000016914	RBM47	100	82.500	Heterocephalus_glaber_female
ENSSPAG00000001257	rbm47	100	83.554	ENSHGLG00100014028	-	100	82.500	Heterocephalus_glaber_male
ENSSPAG00000001257	rbm47	100	77.494	ENSHGLG00100003071	-	100	69.849	Heterocephalus_glaber_male
ENSSPAG00000001257	rbm47	99	95.887	ENSHCOG00000002074	rbm47	99	95.887	Hippocampus_comes
ENSSPAG00000001257	rbm47	100	87.949	ENSIPUG00000004743	rbm47	100	87.949	Ictalurus_punctatus
ENSSPAG00000001257	rbm47	100	81.432	ENSSTOG00000004727	RBM47	100	81.841	Ictidomys_tridecemlineatus
ENSSPAG00000001257	rbm47	93	86.761	ENSJJAG00000013823	Rbm47	100	77.205	Jaculus_jaculus
ENSSPAG00000001257	rbm47	100	94.872	ENSKMAG00000000084	rbm47	100	94.872	Kryptolebias_marmoratus
ENSSPAG00000001257	rbm47	100	95.116	ENSLBEG00000008436	rbm47	100	94.962	Labrus_bergylta
ENSSPAG00000001257	rbm47	93	88.235	ENSLACG00000007196	RBM47	100	80.201	Latimeria_chalumnae
ENSSPAG00000001257	rbm47	93	91.501	ENSLOCG00000012966	rbm47	95	84.680	Lepisosteus_oculatus
ENSSPAG00000001257	rbm47	100	79.028	ENSLAFG00000011998	RBM47	100	78.464	Loxodonta_africana
ENSSPAG00000001257	rbm47	100	82.181	ENSMFAG00000037967	RBM47	100	82.653	Macaca_fascicularis
ENSSPAG00000001257	rbm47	93	85.593	ENSMMUG00000012036	RBM47	100	84.974	Macaca_mulatta
ENSSPAG00000001257	rbm47	100	81.915	ENSMNEG00000040774	RBM47	100	82.653	Macaca_nemestrina
ENSSPAG00000001257	rbm47	100	84.127	ENSMLEG00000041432	RBM47	100	86.349	Mandrillus_leucophaeus
ENSSPAG00000001257	rbm47	100	97.172	ENSMAMG00000019143	rbm47	100	97.172	Mastacembelus_armatus
ENSSPAG00000001257	rbm47	100	94.602	ENSMZEG00005023659	rbm47	100	94.602	Maylandia_zebra
ENSSPAG00000001257	rbm47	100	83.418	ENSMGAG00000012226	RBM47	100	80.265	Meleagris_gallopavo
ENSSPAG00000001257	rbm47	100	82.322	ENSMAUG00000006493	Rbm47	100	82.278	Mesocricetus_auratus
ENSSPAG00000001257	rbm47	100	79.467	ENSMICG00000026417	RBM47	100	80.051	Microcebus_murinus
ENSSPAG00000001257	rbm47	100	82.540	ENSMOCG00000021170	Rbm47	100	81.888	Microtus_ochrogaster
ENSSPAG00000001257	rbm47	100	95.116	ENSMMOG00000007260	rbm47	100	95.058	Mola_mola
ENSSPAG00000001257	rbm47	57	79.421	ENSMODG00000015426	-	97	79.421	Monodelphis_domestica
ENSSPAG00000001257	rbm47	100	76.156	ENSMODG00000020561	-	100	74.286	Monodelphis_domestica
ENSSPAG00000001257	rbm47	100	82.864	ENSMODG00000007003	RBM47	100	79.466	Monodelphis_domestica
ENSSPAG00000001257	rbm47	100	96.088	ENSMALG00000005167	rbm47	100	96.088	Monopterus_albus
ENSSPAG00000001257	rbm47	100	82.979	MGP_CAROLIEiJ_G0027258	Rbm47	100	84.309	Mus_caroli
ENSSPAG00000001257	rbm47	100	82.979	ENSMUSG00000070780	Rbm47	100	84.309	Mus_musculus
ENSSPAG00000001257	rbm47	100	83.245	MGP_PahariEiJ_G0017040	Rbm47	100	84.574	Mus_pahari
ENSSPAG00000001257	rbm47	100	82.979	MGP_SPRETEiJ_G0028253	Rbm47	100	84.309	Mus_spretus
ENSSPAG00000001257	rbm47	93	85.915	ENSMPUG00000006177	RBM47	94	78.094	Mustela_putorius_furo
ENSSPAG00000001257	rbm47	100	81.425	ENSMLUG00000000889	RBM47	100	78.930	Myotis_lucifugus
ENSSPAG00000001257	rbm47	100	81.122	ENSNGAG00000003325	Rbm47	100	77.333	Nannospalax_galili
ENSSPAG00000001257	rbm47	100	95.116	ENSNBRG00000015092	rbm47	100	94.290	Neolamprologus_brichardi
ENSSPAG00000001257	rbm47	100	82.181	ENSNLEG00000017151	RBM47	100	85.372	Nomascus_leucogenys
ENSSPAG00000001257	rbm47	66	88.418	ENSMEUG00000009516	-	99	81.368	Notamacropus_eugenii
ENSSPAG00000001257	rbm47	86	85.892	ENSOPRG00000016507	-	75	85.892	Ochotona_princeps
ENSSPAG00000001257	rbm47	93	85.070	ENSODEG00000004873	RBM47	100	78.655	Octodon_degus
ENSSPAG00000001257	rbm47	100	95.630	ENSONIG00000009061	rbm47	100	94.745	Oreochromis_niloticus
ENSSPAG00000001257	rbm47	100	82.097	ENSOANG00000008978	RBM47	100	79.431	Ornithorhynchus_anatinus
ENSSPAG00000001257	rbm47	100	80.051	ENSOCUG00000012034	RBM47	100	78.930	Oryctolagus_cuniculus
ENSSPAG00000001257	rbm47	100	94.359	ENSORLG00000005847	rbm47	100	94.359	Oryzias_latipes
ENSSPAG00000001257	rbm47	100	94.359	ENSORLG00020005154	rbm47	100	94.359	Oryzias_latipes_hni
ENSSPAG00000001257	rbm47	100	94.615	ENSORLG00015000066	rbm47	100	94.615	Oryzias_latipes_hsok
ENSSPAG00000001257	rbm47	100	94.458	ENSOMEG00000010730	rbm47	100	94.344	Oryzias_melastigma
ENSSPAG00000001257	rbm47	93	85.915	ENSOGAG00000029367	-	100	78.261	Otolemur_garnettii
ENSSPAG00000001257	rbm47	93	80.563	ENSOGAG00000025193	-	100	72.727	Otolemur_garnettii
ENSSPAG00000001257	rbm47	100	69.682	ENSOARG00000012711	RBM47	100	71.309	Ovis_aries
ENSSPAG00000001257	rbm47	93	85.593	ENSPPAG00000029763	RBM47	95	85.372	Pan_paniscus
ENSSPAG00000001257	rbm47	100	82.058	ENSPPRG00000012873	RBM47	100	84.533	Panthera_pardus
ENSSPAG00000001257	rbm47	86	76.786	ENSPTIG00000017046	RBM47	100	77.381	Panthera_tigris_altaica
ENSSPAG00000001257	rbm47	100	82.181	ENSPTRG00000016006	RBM47	100	82.653	Pan_troglodytes
ENSSPAG00000001257	rbm47	100	82.181	ENSPANG00000005980	RBM47	100	82.653	Papio_anubis
ENSSPAG00000001257	rbm47	94	89.296	ENSPKIG00000005037	rbm47	100	84.478	Paramormyrops_kingsleyae
ENSSPAG00000001257	rbm47	100	84.833	ENSPKIG00000013431	RBM47	98	84.833	Paramormyrops_kingsleyae
ENSSPAG00000001257	rbm47	88	83.163	ENSPSIG00000017516	RBM47	97	81.356	Pelodiscus_sinensis
ENSSPAG00000001257	rbm47	100	93.367	ENSPMGG00000018540	rbm47	100	93.367	Periophthalmus_magnuspinnatus
ENSSPAG00000001257	rbm47	100	82.275	ENSPEMG00000011088	Rbm47	100	83.598	Peromyscus_maniculatus_bairdii
ENSSPAG00000001257	rbm47	100	93.059	ENSPFOG00000007997	rbm47	100	90.523	Poecilia_formosa
ENSSPAG00000001257	rbm47	100	92.973	ENSPLAG00000002072	rbm47	100	92.973	Poecilia_latipinna
ENSSPAG00000001257	rbm47	100	93.059	ENSPMEG00000017492	rbm47	100	93.059	Poecilia_mexicana
ENSSPAG00000001257	rbm47	100	93.059	ENSPREG00000008456	rbm47	100	93.243	Poecilia_reticulata
ENSSPAG00000001257	rbm47	93	75.350	ENSPPYG00000014688	RBM47	100	69.024	Pongo_abelii
ENSSPAG00000001257	rbm47	89	78.894	ENSPCAG00000011879	RBM47	81	84.962	Procavia_capensis
ENSSPAG00000001257	rbm47	100	81.649	ENSPCOG00000023451	RBM47	100	84.043	Propithecus_coquereli
ENSSPAG00000001257	rbm47	93	84.594	ENSPVAG00000003812	RBM47	100	78.130	Pteropus_vampyrus
ENSSPAG00000001257	rbm47	100	94.602	ENSPNYG00000022868	rbm47	100	93.496	Pundamilia_nyererei
ENSSPAG00000001257	rbm47	100	87.212	ENSPNAG00000007940	rbm47	100	87.980	Pygocentrus_nattereri
ENSSPAG00000001257	rbm47	100	80.203	ENSRNOG00000002408	Rbm47	100	78.167	Rattus_norvegicus
ENSSPAG00000001257	rbm47	100	83.333	ENSRBIG00000039601	RBM47	100	82.653	Rhinopithecus_bieti
ENSSPAG00000001257	rbm47	100	83.333	ENSRROG00000044696	RBM47	100	82.653	Rhinopithecus_roxellana
ENSSPAG00000001257	rbm47	100	75.548	ENSSBOG00000028475	RBM47	100	81.856	Saimiri_boliviensis_boliviensis
ENSSPAG00000001257	rbm47	100	83.120	ENSSHAG00000017576	RBM47	100	83.120	Sarcophilus_harrisii
ENSSPAG00000001257	rbm47	100	80.132	ENSSFOG00015012445	rbm47	100	85.678	Scleropages_formosus
ENSSPAG00000001257	rbm47	99	81.229	ENSSFOG00015024101	RBM47	99	84.973	Scleropages_formosus
ENSSPAG00000001257	rbm47	100	95.116	ENSSMAG00000009744	rbm47	100	95.116	Scophthalmus_maximus
ENSSPAG00000001257	rbm47	100	98.649	ENSSDUG00000022684	rbm47	100	97.545	Seriola_dumerili
ENSSPAG00000001257	rbm47	100	98.129	ENSSLDG00000003109	rbm47	100	98.129	Seriola_lalandi_dorsalis
ENSSPAG00000001257	rbm47	85	80.624	ENSSARG00000001735	RBM47	75	83.073	Sorex_araneus
ENSSPAG00000001257	rbm47	100	84.474	ENSSPUG00000007515	RBM47	100	84.474	Sphenodon_punctatus
ENSSPAG00000001257	rbm47	100	82.540	ENSSSCG00000008796	RBM47	100	78.859	Sus_scrofa
ENSSPAG00000001257	rbm47	100	82.908	ENSTGUG00000008705	RBM47	100	80.134	Taeniopygia_guttata
ENSSPAG00000001257	rbm47	100	92.177	ENSTRUG00000014050	rbm47	100	92.177	Takifugu_rubripes
ENSSPAG00000001257	rbm47	100	93.830	ENSTNIG00000006127	rbm47	100	92.916	Tetraodon_nigroviridis
ENSSPAG00000001257	rbm47	81	84.181	ENSTBEG00000001607	RBM47	76	83.200	Tupaia_belangeri
ENSSPAG00000001257	rbm47	93	86.236	ENSTTRG00000002839	RBM47	100	79.293	Tursiops_truncatus
ENSSPAG00000001257	rbm47	93	85.070	ENSUAMG00000021346	RBM47	100	78.428	Ursus_americanus
ENSSPAG00000001257	rbm47	52	86.508	ENSVPAG00000000641	-	56	82.069	Vicugna_pacos
ENSSPAG00000001257	rbm47	93	85.836	ENSVVUG00000014774	RBM47	100	78.057	Vulpes_vulpes
ENSSPAG00000001257	rbm47	100	81.726	ENSXETG00000012802	rbm47	100	78.500	Xenopus_tropicalis
ENSSPAG00000001257	rbm47	100	93.784	ENSXCOG00000000780	rbm47	100	93.784	Xiphophorus_couchianus
ENSSPAG00000001257	rbm47	100	93.573	ENSXMAG00000009874	rbm47	100	93.573	Xiphophorus_maculatus