EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000001269 (Gene tree)
Gene ID: 103362143
Gene Symbol: ythdf3
Alias: wu:fi35c09|zgc:55441
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 9186 bases
Position: chrKK580629.1:93509-102694
Accession: 103362143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000001664	YTH	PF04146.15	2.4e-39	1	1
ENSSPAP00000001693	YTH	PF04146.15	2.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000001723	-	1536	-	ENSSPAP00000001693	511 (aa)	-	-
ENSSPAT00000001694	-	3738	XM_008288417	ENSSPAP00000001664	606 (aa)	XP_008286639	UPI000494DDCC

Gene Model

Click here to download ENSSPAG00000001269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000001269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000001269	ythdf3	97	60.714	ENSSPAG00000017103	ythdf2	95	55.611
ENSSPAG00000001269	ythdf3	99	60.450	ENSSPAG00000003666	YTHDF1	94	76.446
ENSSPAG00000001269	ythdf3	94	57.592	ENSSPAG00000014989	ythdf1	93	57.436

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000001269	ythdf3	97	100.000	ENSAPOG00000024006	ythdf3	100	96.959	Acanthochromis_polyacanthus
ENSSPAG00000001269	ythdf3	99	87.862	ENSACIG00000022287	ythdf3	99	87.862	Amphilophus_citrinellus
ENSSPAG00000001269	ythdf3	97	99.543	ENSAOCG00000000723	ythdf3	99	97.355	Amphiprion_ocellaris
ENSSPAG00000001269	ythdf3	97	99.087	ENSAPEG00000020352	ythdf3	99	96.860	Amphiprion_percula
ENSSPAG00000001269	ythdf3	97	99.083	ENSATEG00000011478	ythdf3	97	98.974	Anabas_testudineus
ENSSPAG00000001269	ythdf3	99	74.655	ENSAPLG00000011329	YTHDF3	100	74.439	Anas_platyrhynchos
ENSSPAG00000001269	ythdf3	96	74.733	ENSACAG00000016837	YTHDF3	98	74.042	Anolis_carolinensis
ENSSPAG00000001269	ythdf3	99	95.861	ENSACLG00000026145	ythdf3	99	95.861	Astatotilapia_calliptera
ENSSPAG00000001269	ythdf3	95	87.273	ENSAMXG00000030366	ythdf3	99	78.508	Astyanax_mexicanus
ENSSPAG00000001269	ythdf3	97	74.824	ENSCGRG00000005613	-	99	73.739	Cricetulus_griseus_crigri
ENSSPAG00000001269	ythdf3	58	63.248	ENSCGRG00000008289	-	93	62.821	Cricetulus_griseus_crigri
ENSSPAG00000001269	ythdf3	100	92.751	ENSCSEG00000014861	ythdf3	98	89.777	Cynoglossus_semilaevis
ENSSPAG00000001269	ythdf3	99	90.744	ENSCVAG00000018114	ythdf3	99	87.963	Cyprinodon_variegatus
ENSSPAG00000001269	ythdf3	99	80.782	ENSDARG00000057939	ythdf3	86	85.526	Danio_rerio
ENSSPAG00000001269	ythdf3	96	87.879	ENSELUG00000014824	ythdf3	99	79.492	Esox_lucius
ENSSPAG00000001269	ythdf3	99	75.652	ENSFALG00000005503	YTHDF3	99	74.783	Ficedula_albicollis
ENSSPAG00000001269	ythdf3	99	92.066	ENSFHEG00000016395	ythdf3	85	96.804	Fundulus_heteroclitus
ENSSPAG00000001269	ythdf3	95	90.431	ENSGMOG00000014950	ythdf3	86	89.189	Gadus_morhua
ENSSPAG00000001269	ythdf3	99	75.478	ENSGALG00000039774	YTHDF3	98	74.564	Gallus_gallus
ENSSPAG00000001269	ythdf3	99	91.405	ENSGAFG00000006529	ythdf3	84	95.890	Gambusia_affinis
ENSSPAG00000001269	ythdf3	99	91.391	ENSGACG00000002998	ythdf3	85	97.260	Gasterosteus_aculeatus
ENSSPAG00000001269	ythdf3	99	96.026	ENSHBUG00000018631	ythdf3	99	96.026	Haplochromis_burtoni
ENSSPAG00000001269	ythdf3	99	83.940	ENSHCOG00000015277	ythdf3	84	94.977	Hippocampus_comes
ENSSPAG00000001269	ythdf3	96	86.395	ENSIPUG00000014157	YTHDF1	95	77.818	Ictalurus_punctatus
ENSSPAG00000001269	ythdf3	97	97.260	ENSKMAG00000008447	ythdf3	97	97.696	Kryptolebias_marmoratus
ENSSPAG00000001269	ythdf3	99	87.293	ENSLBEG00000017003	ythdf3	92	97.788	Labrus_bergylta
ENSSPAG00000001269	ythdf3	92	87.500	ENSLOCG00000004932	ythdf3	87	85.965	Lepisosteus_oculatus
ENSSPAG00000001269	ythdf3	98	87.669	ENSMAMG00000000414	ythdf3	87	94.977	Mastacembelus_armatus
ENSSPAG00000001269	ythdf3	99	95.199	ENSMZEG00005021836	ythdf3	99	95.199	Maylandia_zebra
ENSSPAG00000001269	ythdf3	99	75.478	ENSMGAG00000011168	YTHDF3	99	74.093	Meleagris_gallopavo
ENSSPAG00000001269	ythdf3	62	69.129	ENSMAUG00000012560	Ythdf3	99	68.074	Mesocricetus_auratus
ENSSPAG00000001269	ythdf3	63	54.068	ENSMICG00000009379	-	99	52.895	Microcebus_murinus
ENSSPAG00000001269	ythdf3	97	90.101	ENSMMOG00000003402	ythdf3	95	93.500	Mola_mola
ENSSPAG00000001269	ythdf3	97	97.717	ENSMALG00000000147	ythdf3	98	97.462	Monopterus_albus
ENSSPAG00000001269	ythdf3	98	95.431	ENSNBRG00000023433	ythdf3	99	95.431	Neolamprologus_brichardi
ENSSPAG00000001269	ythdf3	99	95.364	ENSONIG00000014175	ythdf3	99	95.364	Oreochromis_niloticus
ENSSPAG00000001269	ythdf3	97	94.977	ENSORLG00000008640	ythdf3	85	94.977	Oryzias_latipes
ENSSPAG00000001269	ythdf3	97	94.521	ENSORLG00020014684	ythdf3	85	94.521	Oryzias_latipes_hni
ENSSPAG00000001269	ythdf3	97	94.521	ENSORLG00015014880	ythdf3	85	94.521	Oryzias_latipes_hsok
ENSSPAG00000001269	ythdf3	97	95.434	ENSOMEG00000008212	ythdf3	98	87.570	Oryzias_melastigma
ENSSPAG00000001269	ythdf3	97	87.225	ENSPKIG00000008298	ythdf3	98	80.686	Paramormyrops_kingsleyae
ENSSPAG00000001269	ythdf3	96	74.245	ENSPSIG00000015861	YTHDF3	98	74.261	Pelodiscus_sinensis
ENSSPAG00000001269	ythdf3	97	90.856	ENSPMGG00000023791	ythdf3	96	96.246	Periophthalmus_magnuspinnatus
ENSSPAG00000001269	ythdf3	99	92.066	ENSPFOG00000006082	ythdf3	84	95.434	Poecilia_formosa
ENSSPAG00000001269	ythdf3	99	92.231	ENSPLAG00000006902	ythdf3	84	95.890	Poecilia_latipinna
ENSSPAG00000001269	ythdf3	99	92.066	ENSPMEG00000012922	ythdf3	99	84.810	Poecilia_mexicana
ENSSPAG00000001269	ythdf3	99	91.089	ENSPREG00000019781	ythdf3	98	84.153	Poecilia_reticulata
ENSSPAG00000001269	ythdf3	96	55.124	ENSPPYG00000018626	YTHDF3	64	93.023	Pongo_abelii
ENSSPAG00000001269	ythdf3	91	92.553	ENSPVAG00000002740	YTHDF3	85	92.021	Pteropus_vampyrus
ENSSPAG00000001269	ythdf3	99	96.192	ENSPNYG00000002949	ythdf3	99	96.192	Pundamilia_nyererei
ENSSPAG00000001269	ythdf3	95	87.273	ENSPNAG00000021457	ythdf3	86	85.526	Pygocentrus_nattereri
ENSSPAG00000001269	ythdf3	96	83.976	ENSSFOG00015015445	ythdf3	97	88.940	Scleropages_formosus
ENSSPAG00000001269	ythdf3	98	96.284	ENSSMAG00000014999	ythdf3	100	96.284	Scophthalmus_maximus
ENSSPAG00000001269	ythdf3	99	96.647	ENSSDUG00000014403	ythdf3	98	98.643	Seriola_dumerili
ENSSPAG00000001269	ythdf3	97	98.630	ENSSLDG00000005029	ythdf3	99	96.198	Seriola_lalandi_dorsalis
ENSSPAG00000001269	ythdf3	98	75.393	ENSTGUG00000011243	YTHDF3	100	75.175	Taeniopygia_guttata
ENSSPAG00000001269	ythdf3	97	94.521	ENSTRUG00000007870	ythdf3	84	94.521	Takifugu_rubripes
ENSSPAG00000001269	ythdf3	99	86.491	ENSTNIG00000012698	ythdf3	50	86.301	Tetraodon_nigroviridis
ENSSPAG00000001269	ythdf3	98	72.077	ENSTTRG00000014564	YTHDF3	99	72.426	Tursiops_truncatus
ENSSPAG00000001269	ythdf3	83	86.404	ENSVPAG00000008104	YTHDF3	86	90.608	Vicugna_pacos
ENSSPAG00000001269	ythdf3	96	75.588	ENSXETG00000021659	ythdf3	98	74.690	Xenopus_tropicalis
ENSSPAG00000001269	ythdf3	99	87.769	ENSXCOG00000009687	ythdf3	98	77.072	Xiphophorus_couchianus
ENSSPAG00000001269	ythdf3	99	91.240	ENSXMAG00000009698	ythdf3	85	95.434	Xiphophorus_maculatus