EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000001609 (Gene tree)
Gene ID: 103358236
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 6180 bases
Position: chrKK580369.1:100163-106342
Accession: 103358236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000002088	RNA_ligase	PF09414.10	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000002122	-	3705	XM_008283130	ENSSPAP00000002088	910 (aa)	XP_008281352	UPI00049809B3

Gene Model

Click here to download ENSSPAG00000001609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000001609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000001609	lig4	99	65.934	ENSG00000174405	LIG4	100	66.706	Homo_sapiens
ENSSPAG00000001609	lig4	100	93.736	ENSAPOG00000000866	lig4	100	93.736	Acanthochromis_polyacanthus
ENSSPAG00000001609	lig4	99	64.602	ENSAMEG00000019685	LIG4	99	64.602	Ailuropoda_melanoleuca
ENSSPAG00000001609	lig4	99	91.749	ENSACIG00000018309	lig4	99	91.749	Amphilophus_citrinellus
ENSSPAG00000001609	lig4	100	93.626	ENSAOCG00000011768	lig4	100	93.626	Amphiprion_ocellaris
ENSSPAG00000001609	lig4	100	93.846	ENSAPEG00000017815	lig4	100	93.846	Amphiprion_percula
ENSSPAG00000001609	lig4	100	89.560	ENSATEG00000005583	lig4	100	89.560	Anabas_testudineus
ENSSPAG00000001609	lig4	96	66.933	ENSAPLG00000001673	LIG4	99	66.933	Anas_platyrhynchos
ENSSPAG00000001609	lig4	99	67.110	ENSACAG00000014566	LIG4	99	67.110	Anolis_carolinensis
ENSSPAG00000001609	lig4	99	65.604	ENSANAG00000012446	LIG4	99	65.604	Aotus_nancymaae
ENSSPAG00000001609	lig4	99	90.209	ENSACLG00000027051	lig4	99	90.209	Astatotilapia_calliptera
ENSSPAG00000001609	lig4	100	78.953	ENSAMXG00000008192	lig4	95	78.953	Astyanax_mexicanus
ENSSPAG00000001609	lig4	99	65.132	ENSBTAG00000015868	LIG4	99	65.132	Bos_taurus
ENSSPAG00000001609	lig4	99	65.495	ENSCJAG00000014689	LIG4	99	65.495	Callithrix_jacchus
ENSSPAG00000001609	lig4	99	65.495	ENSCAFG00000006031	LIG4	99	65.495	Canis_familiaris
ENSSPAG00000001609	lig4	99	65.495	ENSCAFG00020021230	LIG4	99	65.495	Canis_lupus_dingo
ENSSPAG00000001609	lig4	99	65.055	ENSCHIG00000001019	LIG4	99	65.055	Capra_hircus
ENSSPAG00000001609	lig4	99	64.784	ENSCAPG00000006284	LIG4	99	64.784	Cavia_aperea
ENSSPAG00000001609	lig4	99	64.615	ENSCPOG00000014266	LIG4	99	64.615	Cavia_porcellus
ENSSPAG00000001609	lig4	99	65.604	ENSCCAG00000019971	LIG4	99	65.604	Cebus_capucinus
ENSSPAG00000001609	lig4	99	65.351	ENSCATG00000021075	LIG4	99	65.351	Cercocebus_atys
ENSSPAG00000001609	lig4	99	65.275	ENSCLAG00000003376	LIG4	99	65.275	Chinchilla_lanigera
ENSSPAG00000001609	lig4	99	65.132	ENSCSAG00000000211	LIG4	99	65.132	Chlorocebus_sabaeus
ENSSPAG00000001609	lig4	99	68.257	ENSCPBG00000023291	LIG4	100	67.505	Chrysemys_picta_bellii
ENSSPAG00000001609	lig4	69	46.855	ENSCING00000009536	-	97	46.855	Ciona_intestinalis
ENSSPAG00000001609	lig4	83	44.737	ENSCSAVG00000010336	-	98	44.737	Ciona_savignyi
ENSSPAG00000001609	lig4	99	65.165	ENSCANG00000005805	LIG4	99	65.165	Colobus_angolensis_palliatus
ENSSPAG00000001609	lig4	99	65.193	ENSCGRG00001012072	Lig4	99	65.193	Cricetulus_griseus_chok1gshd
ENSSPAG00000001609	lig4	99	65.193	ENSCGRG00000013417	Lig4	99	65.193	Cricetulus_griseus_crigri
ENSSPAG00000001609	lig4	97	84.893	ENSCSEG00000013905	lig4	96	84.893	Cynoglossus_semilaevis
ENSSPAG00000001609	lig4	100	89.023	ENSCVAG00000007896	lig4	100	89.023	Cyprinodon_variegatus
ENSSPAG00000001609	lig4	100	79.341	ENSDARG00000060620	lig4	100	79.341	Danio_rerio
ENSSPAG00000001609	lig4	99	64.984	ENSDNOG00000000513	LIG4	99	64.984	Dasypus_novemcinctus
ENSSPAG00000001609	lig4	99	65.559	ENSDORG00000027303	Lig4	99	65.559	Dipodomys_ordii
ENSSPAG00000001609	lig4	89	31.176	FBgn0030506	Lig4	91	31.294	Drosophila_melanogaster
ENSSPAG00000001609	lig4	98	63.304	ENSETEG00000015563	LIG4	100	63.636	Echinops_telfairi
ENSSPAG00000001609	lig4	99	45.455	ENSEBUG00000014243	lig4	99	45.243	Eptatretus_burgeri
ENSSPAG00000001609	lig4	99	64.945	ENSEASG00005022073	LIG4	99	64.945	Equus_asinus_asinus
ENSSPAG00000001609	lig4	99	64.654	ENSECAG00000003257	LIG4	99	64.654	Equus_caballus
ENSSPAG00000001609	lig4	98	83.204	ENSELUG00000006787	lig4	99	83.315	Esox_lucius
ENSSPAG00000001609	lig4	99	64.452	ENSFCAG00000031985	LIG4	99	64.452	Felis_catus
ENSSPAG00000001609	lig4	88	68.742	ENSFALG00000004214	LIG4	98	68.742	Ficedula_albicollis
ENSSPAG00000001609	lig4	99	64.396	ENSFDAG00000008973	LIG4	99	64.396	Fukomys_damarensis
ENSSPAG00000001609	lig4	100	88.694	ENSFHEG00000007398	lig4	91	88.694	Fundulus_heteroclitus
ENSSPAG00000001609	lig4	85	78.323	ENSGMOG00000012843	lig4	99	78.323	Gadus_morhua
ENSSPAG00000001609	lig4	99	66.373	ENSGALG00000016854	LIG4	99	66.373	Gallus_gallus
ENSSPAG00000001609	lig4	99	87.623	ENSGAFG00000019779	lig4	96	88.171	Gambusia_affinis
ENSSPAG00000001609	lig4	99	85.714	ENSGACG00000014135	lig4	99	85.714	Gasterosteus_aculeatus
ENSSPAG00000001609	lig4	99	65.714	ENSGGOG00000027771	LIG4	99	65.714	Gorilla_gorilla
ENSSPAG00000001609	lig4	99	89.989	ENSHBUG00000006245	lig4	99	89.989	Haplochromis_burtoni
ENSSPAG00000001609	lig4	99	64.505	ENSHGLG00000000718	LIG4	99	64.505	Heterocephalus_glaber_female
ENSSPAG00000001609	lig4	99	64.505	ENSHGLG00100003265	LIG4	99	64.505	Heterocephalus_glaber_male
ENSSPAG00000001609	lig4	100	83.443	ENSHCOG00000012010	lig4	100	83.443	Hippocampus_comes
ENSSPAG00000001609	lig4	100	78.022	ENSIPUG00000013748	lig4	100	78.022	Ictalurus_punctatus
ENSSPAG00000001609	lig4	99	65.227	ENSSTOG00000024303	LIG4	99	65.227	Ictidomys_tridecemlineatus
ENSSPAG00000001609	lig4	99	64.945	ENSJJAG00000006750	Lig4	99	64.945	Jaculus_jaculus
ENSSPAG00000001609	lig4	100	86.264	ENSKMAG00000001149	lig4	100	86.264	Kryptolebias_marmoratus
ENSSPAG00000001609	lig4	91	89.601	ENSLBEG00000014578	lig4	100	89.601	Labrus_bergylta
ENSSPAG00000001609	lig4	100	67.434	ENSLACG00000003282	LIG4	100	67.434	Latimeria_chalumnae
ENSSPAG00000001609	lig4	100	73.604	ENSLOCG00000008901	lig4	99	73.604	Lepisosteus_oculatus
ENSSPAG00000001609	lig4	99	64.474	ENSLAFG00000031152	LIG4	99	64.474	Loxodonta_africana
ENSSPAG00000001609	lig4	99	65.461	ENSMFAG00000037235	LIG4	99	65.461	Macaca_fascicularis
ENSSPAG00000001609	lig4	99	65.241	ENSMMUG00000008874	LIG4	99	65.241	Macaca_mulatta
ENSSPAG00000001609	lig4	99	65.461	ENSMNEG00000023575	LIG4	99	65.461	Macaca_nemestrina
ENSSPAG00000001609	lig4	99	65.022	ENSMLEG00000026720	LIG4	99	65.022	Mandrillus_leucophaeus
ENSSPAG00000001609	lig4	100	90.110	ENSMAMG00000008472	lig4	99	90.110	Mastacembelus_armatus
ENSSPAG00000001609	lig4	99	90.209	ENSMZEG00005001855	lig4	99	90.209	Maylandia_zebra
ENSSPAG00000001609	lig4	99	65.971	ENSMGAG00000015532	LIG4	99	65.971	Meleagris_gallopavo
ENSSPAG00000001609	lig4	99	63.898	ENSMOCG00000019000	Lig4	99	63.898	Microtus_ochrogaster
ENSSPAG00000001609	lig4	100	88.462	ENSMMOG00000004390	lig4	100	88.462	Mola_mola
ENSSPAG00000001609	lig4	99	66.228	ENSMODG00000025064	LIG4	99	66.228	Monodelphis_domestica
ENSSPAG00000001609	lig4	100	88.571	ENSMALG00000008555	lig4	100	88.571	Monopterus_albus
ENSSPAG00000001609	lig4	99	65.055	MGP_CAROLIEiJ_G0030809	Lig4	99	64.945	Mus_caroli
ENSSPAG00000001609	lig4	99	64.945	ENSMUSG00000049717	Lig4	99	64.835	Mus_musculus
ENSSPAG00000001609	lig4	99	65.055	MGP_PahariEiJ_G0021270	Lig4	99	65.055	Mus_pahari
ENSSPAG00000001609	lig4	99	65.165	MGP_SPRETEiJ_G0031917	Lig4	99	65.055	Mus_spretus
ENSSPAG00000001609	lig4	99	65.055	ENSMPUG00000018675	LIG4	99	65.055	Mustela_putorius_furo
ENSSPAG00000001609	lig4	99	65.604	ENSMLUG00000001267	LIG4	99	65.604	Myotis_lucifugus
ENSSPAG00000001609	lig4	99	64.945	ENSNGAG00000013258	Lig4	99	64.835	Nannospalax_galili
ENSSPAG00000001609	lig4	99	89.989	ENSNBRG00000021252	lig4	99	89.989	Neolamprologus_brichardi
ENSSPAG00000001609	lig4	99	65.055	ENSNLEG00000007888	LIG4	99	65.055	Nomascus_leucogenys
ENSSPAG00000001609	lig4	99	64.120	ENSOPRG00000005765	LIG4	99	64.120	Ochotona_princeps
ENSSPAG00000001609	lig4	99	64.491	ENSODEG00000019683	LIG4	99	64.491	Octodon_degus
ENSSPAG00000001609	lig4	99	90.319	ENSONIG00000011969	lig4	99	90.319	Oreochromis_niloticus
ENSSPAG00000001609	lig4	99	64.945	ENSOCUG00000015734	LIG4	99	64.945	Oryctolagus_cuniculus
ENSSPAG00000001609	lig4	99	84.649	ENSORLG00000004041	lig4	99	84.649	Oryzias_latipes
ENSSPAG00000001609	lig4	99	84.649	ENSORLG00020019607	lig4	99	84.649	Oryzias_latipes_hni
ENSSPAG00000001609	lig4	99	84.978	ENSORLG00015017754	lig4	99	84.978	Oryzias_latipes_hsok
ENSSPAG00000001609	lig4	75	89.520	ENSOMEG00000003459	lig4	99	89.520	Oryzias_melastigma
ENSSPAG00000001609	lig4	99	65.313	ENSOGAG00000032120	LIG4	99	65.313	Otolemur_garnettii
ENSSPAG00000001609	lig4	81	68.817	ENSOARG00000005590	LIG4	98	68.817	Ovis_aries
ENSSPAG00000001609	lig4	99	65.714	ENSPPAG00000032998	LIG4	99	65.714	Pan_paniscus
ENSSPAG00000001609	lig4	99	64.895	ENSPPRG00000017804	LIG4	99	64.895	Panthera_pardus
ENSSPAG00000001609	lig4	99	64.784	ENSPTIG00000010051	LIG4	99	64.784	Panthera_tigris_altaica
ENSSPAG00000001609	lig4	99	65.824	ENSPTRG00000006025	LIG4	99	65.824	Pan_troglodytes
ENSSPAG00000001609	lig4	99	65.461	ENSPANG00000007562	LIG4	99	65.461	Papio_anubis
ENSSPAG00000001609	lig4	100	77.692	ENSPKIG00000011645	lig4	99	77.692	Paramormyrops_kingsleyae
ENSSPAG00000001609	lig4	99	67.731	ENSPSIG00000001504	LIG4	99	67.731	Pelodiscus_sinensis
ENSSPAG00000001609	lig4	98	81.655	ENSPMGG00000013486	lig4	100	81.093	Periophthalmus_magnuspinnatus
ENSSPAG00000001609	lig4	99	64.823	ENSPEMG00000000076	Lig4	99	64.712	Peromyscus_maniculatus_bairdii
ENSSPAG00000001609	lig4	99	65.237	ENSPCIG00000021882	LIG4	99	65.237	Phascolarctos_cinereus
ENSSPAG00000001609	lig4	100	89.145	ENSPFOG00000000797	lig4	100	89.583	Poecilia_formosa
ENSSPAG00000001609	lig4	100	89.035	ENSPLAG00000001196	lig4	100	89.474	Poecilia_latipinna
ENSSPAG00000001609	lig4	100	89.035	ENSPMEG00000021353	lig4	100	89.583	Poecilia_mexicana
ENSSPAG00000001609	lig4	100	88.048	ENSPREG00000007323	lig4	100	88.596	Poecilia_reticulata
ENSSPAG00000001609	lig4	99	65.165	ENSPPYG00000005540	LIG4	99	65.165	Pongo_abelii
ENSSPAG00000001609	lig4	99	64.725	ENSPVAG00000016403	LIG4	99	64.725	Pteropus_vampyrus
ENSSPAG00000001609	lig4	99	90.209	ENSPNYG00000009660	lig4	99	90.209	Pundamilia_nyererei
ENSSPAG00000001609	lig4	99	80.825	ENSPNAG00000028056	lig4	99	80.825	Pygocentrus_nattereri
ENSSPAG00000001609	lig4	99	80.825	ENSPNAG00000028069	LIG4	99	80.825	Pygocentrus_nattereri
ENSSPAG00000001609	lig4	99	64.648	ENSRNOG00000014605	Lig4	99	64.537	Rattus_norvegicus
ENSSPAG00000001609	lig4	99	64.725	ENSRBIG00000039962	LIG4	99	64.725	Rhinopithecus_bieti
ENSSPAG00000001609	lig4	99	65.275	ENSRROG00000006040	LIG4	99	65.275	Rhinopithecus_roxellana
ENSSPAG00000001609	lig4	99	65.165	ENSSBOG00000019029	LIG4	99	65.165	Saimiri_boliviensis_boliviensis
ENSSPAG00000001609	lig4	99	62.926	ENSSHAG00000009525	LIG4	99	63.036	Sarcophilus_harrisii
ENSSPAG00000001609	lig4	100	79.011	ENSSFOG00015012835	lig4	100	79.011	Scleropages_formosus
ENSSPAG00000001609	lig4	100	83.736	ENSSMAG00000011267	lig4	100	83.736	Scophthalmus_maximus
ENSSPAG00000001609	lig4	100	88.512	ENSSDUG00000010343	lig4	100	88.512	Seriola_dumerili
ENSSPAG00000001609	lig4	100	87.090	ENSSLDG00000003239	lig4	100	87.090	Seriola_lalandi_dorsalis
ENSSPAG00000001609	lig4	99	64.796	ENSSARG00000006573	LIG4	99	64.796	Sorex_araneus
ENSSPAG00000001609	lig4	92	69.286	ENSSPUG00000002444	LIG4	100	69.286	Sphenodon_punctatus
ENSSPAG00000001609	lig4	99	65.127	ENSSSCG00000009540	LIG4	99	65.127	Sus_scrofa
ENSSPAG00000001609	lig4	99	66.115	ENSTGUG00000010795	LIG4	100	66.115	Taeniopygia_guttata
ENSSPAG00000001609	lig4	100	86.923	ENSTRUG00000009984	lig4	100	86.923	Takifugu_rubripes
ENSSPAG00000001609	lig4	100	83.626	ENSTNIG00000010348	lig4	100	83.846	Tetraodon_nigroviridis
ENSSPAG00000001609	lig4	99	65.055	ENSTBEG00000017741	LIG4	99	65.055	Tupaia_belangeri
ENSSPAG00000001609	lig4	99	64.615	ENSTTRG00000012660	LIG4	99	64.615	Tursiops_truncatus
ENSSPAG00000001609	lig4	99	64.491	ENSUAMG00000003773	LIG4	99	64.491	Ursus_americanus
ENSSPAG00000001609	lig4	100	67.544	ENSXETG00000002654	lig4	100	67.544	Xenopus_tropicalis
ENSSPAG00000001609	lig4	100	89.035	ENSXCOG00000017401	lig4	100	89.035	Xiphophorus_couchianus
ENSSPAG00000001609	lig4	100	88.816	ENSXMAG00000015142	lig4	99	88.816	Xiphophorus_maculatus