EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000001710 (Gene tree)
Gene ID: 103365451
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 4585 bases
Position: chrKK580912.1:78929-83513
Accession: 103365451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000002221	GTP_EFTU	PF00009.27	1.5e-53	1	1
ENSSPAP00000002221	GTP_EFTU_D2	PF03144.25	1e-14	1	1
ENSSPAP00000002221	GTP_EFTU_D3	PF03143.17	5.7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000002256	-	2232	XM_008292885	ENSSPAP00000002221	461 (aa)	XP_008291107	UPI000496D152

Gene Model

Click here to download ENSSPAG00000001710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000001710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000001710	-	99	68.490	ENSSPAG00000013856	si:dkey-37o8.1	96	70.068
ENSSPAG00000001710	-	100	85.498	ENSSPAG00000015488	-	98	85.841
ENSSPAG00000001710	-	96	37.923	ENSSPAG00000009785	-	84	37.923
ENSSPAG00000001710	-	100	82.684	ENSSPAG00000001742	-	97	83.259
ENSSPAG00000001710	-	100	85.714	ENSSPAG00000007007	eef1a1b	98	86.283
ENSSPAG00000001710	-	95	39.180	ENSSPAG00000011542	gspt1l	82	37.698
ENSSPAG00000001710	-	96	37.923	ENSSPAG00000004622	-	73	37.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000001710	-	98	91.353	ENSAPOG00000004714	-	98	91.353	Acanthochromis_polyacanthus
ENSSPAG00000001710	-	90	92.494	ENSACIG00000001219	-	97	92.556	Amphilophus_citrinellus
ENSSPAG00000001710	-	100	90.239	ENSAOCG00000022039	-	98	90.687	Amphiprion_ocellaris
ENSSPAG00000001710	-	87	92.804	ENSAOCG00000022002	-	98	92.804	Amphiprion_ocellaris
ENSSPAG00000001710	-	100	90.889	ENSAPEG00000016361	-	98	91.353	Amphiprion_percula
ENSSPAG00000001710	-	98	93.792	ENSATEG00000003244	-	95	93.792	Anabas_testudineus
ENSSPAG00000001710	-	100	91.974	ENSACLG00000022560	-	98	92.018	Astatotilapia_calliptera
ENSSPAG00000001710	-	100	81.818	WBGene00001168	eef-1A.1	98	82.301	Caenorhabditis_elegans
ENSSPAG00000001710	-	100	81.818	WBGene00001169	eef-1A.2	98	82.301	Caenorhabditis_elegans
ENSSPAG00000001710	-	100	77.897	ENSCING00000007703	-	97	78.070	Ciona_intestinalis
ENSSPAG00000001710	-	98	80.659	ENSCING00000005126	-	98	80.659	Ciona_intestinalis
ENSSPAG00000001710	-	98	79.075	ENSCING00000018894	-	97	79.075	Ciona_intestinalis
ENSSPAG00000001710	-	99	82.096	ENSCING00000021478	-	98	82.628	Ciona_intestinalis
ENSSPAG00000001710	-	99	82.276	ENSCSAVG00000006357	-	96	93.333	Ciona_savignyi
ENSSPAG00000001710	-	97	81.596	ENSCSAVG00000009663	-	97	81.596	Ciona_savignyi
ENSSPAG00000001710	-	99	76.586	ENSCSAVG00000001085	-	89	77.703	Ciona_savignyi
ENSSPAG00000001710	-	97	80.132	ENSCSAVG00000003196	-	97	80.132	Ciona_savignyi
ENSSPAG00000001710	-	98	92.239	ENSCSEG00000008011	-	98	92.239	Cynoglossus_semilaevis
ENSSPAG00000001710	-	90	84.058	ENSCSEG00000007972	-	98	84.406	Cynoglossus_semilaevis
ENSSPAG00000001710	-	89	86.165	ENSCSEG00000007992	-	97	86.352	Cynoglossus_semilaevis
ENSSPAG00000001710	-	98	94.235	ENSCVAG00000019356	-	98	94.235	Cyprinodon_variegatus
ENSSPAG00000001710	-	100	85.281	FBgn0284245	eEF1alpha1	97	85.714	Drosophila_melanogaster
ENSSPAG00000001710	-	98	84.513	FBgn0000557	eEF1alpha2	98	84.513	Drosophila_melanogaster
ENSSPAG00000001710	-	99	81.304	ENSEBUG00000015814	-	98	81.818	Eptatretus_burgeri
ENSSPAG00000001710	-	98	93.792	ENSFHEG00000015054	-	98	93.792	Fundulus_heteroclitus
ENSSPAG00000001710	-	98	93.792	ENSGAFG00000014646	-	98	93.792	Gambusia_affinis
ENSSPAG00000001710	-	100	90.239	ENSGACG00000002143	-	98	90.466	Gasterosteus_aculeatus
ENSSPAG00000001710	-	98	91.574	ENSGACG00000002182	-	98	91.574	Gasterosteus_aculeatus
ENSSPAG00000001710	-	55	89.328	ENSHBUG00000017166	-	91	89.300	Haplochromis_burtoni
ENSSPAG00000001710	-	99	83.514	ENSHCOG00000008489	-	96	84.615	Hippocampus_comes
ENSSPAG00000001710	-	98	92.018	ENSHCOG00000008468	-	98	92.018	Hippocampus_comes
ENSSPAG00000001710	-	99	84.565	ENSLBEG00000002955	-	98	84.701	Labrus_bergylta
ENSSPAG00000001710	-	98	91.796	ENSLBEG00000002759	-	98	91.796	Labrus_bergylta
ENSSPAG00000001710	-	98	93.570	ENSMAMG00000007715	-	98	93.570	Mastacembelus_armatus
ENSSPAG00000001710	-	98	90.909	ENSMMOG00000001165	-	98	90.909	Mola_mola
ENSSPAG00000001710	-	99	75.439	ENSMMOG00000018160	-	95	89.130	Mola_mola
ENSSPAG00000001710	-	99	85.435	ENSMMOG00000001106	-	98	85.809	Mola_mola
ENSSPAG00000001710	-	100	80.736	ENSNBRG00000017346	-	97	80.531	Neolamprologus_brichardi
ENSSPAG00000001710	-	76	90.057	ENSONIG00000017760	-	98	90.057	Oreochromis_niloticus
ENSSPAG00000001710	-	98	94.678	ENSORLG00000007614	eef1a	98	94.678	Oryzias_latipes
ENSSPAG00000001710	-	98	94.457	ENSORLG00015002397	-	98	94.457	Oryzias_latipes_hsok
ENSSPAG00000001710	-	98	94.013	ENSOMEG00000018226	-	98	94.013	Oryzias_melastigma
ENSSPAG00000001710	-	95	48.970	ENSPMGG00000022427	-	96	61.250	Periophthalmus_magnuspinnatus
ENSSPAG00000001710	-	98	92.920	ENSPMGG00000023911	-	99	93.111	Periophthalmus_magnuspinnatus
ENSSPAG00000001710	-	98	93.570	ENSPFOG00000003924	-	98	93.797	Poecilia_formosa
ENSSPAG00000001710	-	98	93.570	ENSPLAG00000004316	-	98	93.570	Poecilia_latipinna
ENSSPAG00000001710	-	98	93.792	ENSPMEG00000001010	-	98	93.792	Poecilia_mexicana
ENSSPAG00000001710	-	100	91.775	ENSPREG00000008243	-	98	93.570	Poecilia_reticulata
ENSSPAG00000001710	-	100	91.974	ENSPNYG00000007263	-	98	92.018	Pundamilia_nyererei
ENSSPAG00000001710	-	97	80.225	YPR080W	TEF1	98	79.601	Saccharomyces_cerevisiae
ENSSPAG00000001710	-	97	80.225	YBR118W	TEF2	98	79.601	Saccharomyces_cerevisiae
ENSSPAG00000001710	-	98	81.224	ENSSMAG00000018469	-	98	81.224	Scophthalmus_maximus
ENSSPAG00000001710	-	53	88.525	ENSSMAG00000016277	-	96	88.525	Scophthalmus_maximus
ENSSPAG00000001710	-	98	94.013	ENSSDUG00000008198	-	98	94.013	Seriola_dumerili
ENSSPAG00000001710	-	99	84.130	ENSTRUG00000005066	-	98	84.479	Takifugu_rubripes
ENSSPAG00000001710	-	98	91.796	ENSTRUG00000005727	ef-1a	98	91.796	Takifugu_rubripes
ENSSPAG00000001710	-	99	81.087	ENSTNIG00000002617	-	94	82.851	Tetraodon_nigroviridis
ENSSPAG00000001710	-	98	92.683	ENSTNIG00000002619	-	98	92.683	Tetraodon_nigroviridis
ENSSPAG00000001710	-	98	93.570	ENSXCOG00000001542	-	99	93.498	Xiphophorus_couchianus