EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000001821 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 2993 bases
Position: chrKK580912.1:172118-175110
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000002380	RRM_1	PF00076.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000002418	-	213	-	ENSSPAP00000002380	70 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000001821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000001821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000001821	-	76	94.340	ENSSPAG00000020494	SRSF10	55	94.340

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000001821	-	83	82.759	ENSG00000154548	SRSF12	73	50.000	Homo_sapiens
ENSSPAG00000001821	-	91	90.625	ENSAPOG00000024545	-	100	90.625	Acanthochromis_polyacanthus
ENSSPAG00000001821	-	100	97.143	ENSACIG00000001537	-	100	97.143	Amphilophus_citrinellus
ENSSPAG00000001821	-	97	83.824	ENSACIG00000018697	-	100	83.824	Amphilophus_citrinellus
ENSSPAG00000001821	-	100	95.714	ENSAPEG00000016160	-	100	95.714	Amphiprion_percula
ENSSPAG00000001821	-	99	87.143	ENSATEG00000003493	-	97	87.143	Anabas_testudineus
ENSSPAG00000001821	-	86	90.000	ENSAMXG00000031867	-	87	90.000	Astyanax_mexicanus
ENSSPAG00000001821	-	86	83.333	ENSCHIG00000023999	-	87	83.333	Capra_hircus
ENSSPAG00000001821	-	83	70.690	ENSCHIG00000011877	-	76	70.690	Capra_hircus
ENSSPAG00000001821	-	86	88.333	ENSDARG00000112572	CR293507.1	100	88.333	Danio_rerio
ENSSPAG00000001821	-	87	95.082	ENSFHEG00000000365	-	55	95.082	Fundulus_heteroclitus
ENSSPAG00000001821	-	97	89.706	ENSHCOG00000008417	-	78	89.706	Hippocampus_comes
ENSSPAG00000001821	-	86	93.333	ENSHCOG00000005897	-	88	93.333	Hippocampus_comes
ENSSPAG00000001821	-	86	91.667	ENSIPUG00000023118	-	57	91.667	Ictalurus_punctatus
ENSSPAG00000001821	-	90	96.825	ENSLBEG00000012669	-	95	96.825	Labrus_bergylta
ENSSPAG00000001821	-	91	84.375	ENSMAMG00000008111	-	92	84.375	Mastacembelus_armatus
ENSSPAG00000001821	-	99	88.406	ENSMAMG00000007646	-	76	88.406	Mastacembelus_armatus
ENSSPAG00000001821	-	83	81.034	ENSMAUG00000009812	-	85	81.034	Mesocricetus_auratus
ENSSPAG00000001821	-	100	97.143	ENSMMOG00000013350	-	100	97.143	Mola_mola
ENSSPAG00000001821	-	97	85.294	ENSNBRG00000010616	-	97	85.294	Neolamprologus_brichardi
ENSSPAG00000001821	-	91	71.875	ENSODEG00000003118	-	90	71.875	Octodon_degus
ENSSPAG00000001821	-	86	78.333	ENSODEG00000000894	-	87	78.333	Octodon_degus
ENSSPAG00000001821	-	96	83.582	ENSPKIG00000000613	-	75	83.582	Paramormyrops_kingsleyae
ENSSPAG00000001821	-	83	75.862	ENSPEMG00000021564	-	81	75.862	Peromyscus_maniculatus_bairdii
ENSSPAG00000001821	-	86	88.333	ENSPNAG00000009501	-	91	88.333	Pygocentrus_nattereri
ENSSPAG00000001821	-	96	83.582	ENSSMAG00000018546	-	89	83.582	Scophthalmus_maximus
ENSSPAG00000001821	-	86	90.000	ENSSLDG00000002710	-	97	90.000	Seriola_lalandi_dorsalis
ENSSPAG00000001821	-	94	87.879	ENSSLDG00000000417	-	88	87.879	Seriola_lalandi_dorsalis
ENSSPAG00000001821	-	86	80.645	ENSSPUG00000016216	-	93	80.645	Sphenodon_punctatus
ENSSPAG00000001821	-	86	100.000	ENSTRUG00000019904	-	82	100.000	Takifugu_rubripes