EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000001842 (Gene tree)
Gene ID: 103356607
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 13426 bases
Position: chrKK580282.1:64817-78242
Accession: 103356607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000002544	ResIII	PF04851.15	6.6e-27	1	2
ENSSPAP00000002544	ResIII	PF04851.15	6.6e-27	2	2
ENSSPAP00000002527	ResIII	PF04851.15	7.9e-27	1	2
ENSSPAP00000002527	ResIII	PF04851.15	7.9e-27	2	2
ENSSPAP00000002544	DEAD	PF00270.29	2.8e-54	1	2
ENSSPAP00000002544	DEAD	PF00270.29	2.8e-54	2	2
ENSSPAP00000002527	DEAD	PF00270.29	4.1e-54	1	2
ENSSPAP00000002527	DEAD	PF00270.29	4.1e-54	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000002583	-	5700	-	ENSSPAP00000002544	1899 (aa)	-	-
ENSSPAT00000002565	-	6735	XM_008280831	ENSSPAP00000002527	2136 (aa)	XP_008279053	UPI0004976C6F

Gene Model

Click here to download ENSSPAG00000001842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000001842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000001842	snrnp200	79	48.575	ENSSPAG00000007677	ascc3	80	45.152
ENSSPAG00000001842	snrnp200	71	31.731	ENSSPAG00000001023	hfm1	87	31.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000001842	snrnp200	99	90.684	ENSG00000144028	SNRNP200	99	90.801	Homo_sapiens
ENSSPAG00000001842	snrnp200	100	99.672	ENSAPOG00000010223	snrnp200	100	99.672	Acanthochromis_polyacanthus
ENSSPAG00000001842	snrnp200	99	90.730	ENSAMEG00000008996	SNRNP200	99	90.841	Ailuropoda_melanoleuca
ENSSPAG00000001842	snrnp200	99	97.310	ENSACIG00000001764	snrnp200	99	97.310	Amphilophus_citrinellus
ENSSPAG00000001842	snrnp200	100	99.485	ENSAOCG00000024593	snrnp200	100	99.485	Amphiprion_ocellaris
ENSSPAG00000001842	snrnp200	98	98.821	ENSAPEG00000012554	snrnp200	100	98.821	Amphiprion_percula
ENSSPAG00000001842	snrnp200	100	99.017	ENSATEG00000022522	snrnp200	100	99.017	Anabas_testudineus
ENSSPAG00000001842	snrnp200	99	90.901	ENSAPLG00000004313	SNRNP200	99	90.965	Anas_platyrhynchos
ENSSPAG00000001842	snrnp200	99	90.047	ENSACAG00000000434	SNRNP200	100	90.047	Anolis_carolinensis
ENSSPAG00000001842	snrnp200	99	87.903	ENSANAG00000036625	SNRNP200	99	88.004	Aotus_nancymaae
ENSSPAG00000001842	snrnp200	100	97.987	ENSACLG00000011188	snrnp200	100	97.987	Astatotilapia_calliptera
ENSSPAG00000001842	snrnp200	99	94.922	ENSAMXG00000005684	snrnp200	99	94.922	Astyanax_mexicanus
ENSSPAG00000001842	snrnp200	99	90.496	ENSBTAG00000000848	SNRNP200	99	90.606	Bos_taurus
ENSSPAG00000001842	snrnp200	99	90.637	ENSCJAG00000007514	SNRNP200	99	90.747	Callithrix_jacchus
ENSSPAG00000001842	snrnp200	99	89.967	ENSCAFG00020019979	SNRNP200	99	91.857	Canis_lupus_dingo
ENSSPAG00000001842	snrnp200	99	90.449	ENSCHIG00000020611	SNRNP200	99	90.559	Capra_hircus
ENSSPAG00000001842	snrnp200	99	90.730	ENSTSYG00000010467	SNRNP200	99	90.841	Carlito_syrichta
ENSSPAG00000001842	snrnp200	99	90.221	ENSCAPG00000017234	SNRNP200	99	90.330	Cavia_aperea
ENSSPAG00000001842	snrnp200	99	90.543	ENSCPOG00000006776	SNRNP200	99	90.653	Cavia_porcellus
ENSSPAG00000001842	snrnp200	99	90.637	ENSCCAG00000033962	SNRNP200	99	90.747	Cebus_capucinus
ENSSPAG00000001842	snrnp200	99	90.684	ENSCATG00000015790	SNRNP200	99	90.794	Cercocebus_atys
ENSSPAG00000001842	snrnp200	99	90.590	ENSCLAG00000004116	SNRNP200	99	90.700	Chinchilla_lanigera
ENSSPAG00000001842	snrnp200	99	90.684	ENSCSAG00000017369	SNRNP200	99	90.794	Chlorocebus_sabaeus
ENSSPAG00000001842	snrnp200	73	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSSPAG00000001842	snrnp200	99	90.650	ENSCPBG00000022571	SNRNP200	99	92.500	Chrysemys_picta_bellii
ENSSPAG00000001842	snrnp200	99	75.782	ENSCING00000005082	-	99	76.019	Ciona_intestinalis
ENSSPAG00000001842	snrnp200	94	90.396	ENSCANG00000033932	SNRNP200	99	90.509	Colobus_angolensis_palliatus
ENSSPAG00000001842	snrnp200	99	90.684	ENSCGRG00001022610	Snrnp200	99	90.794	Cricetulus_griseus_chok1gshd
ENSSPAG00000001842	snrnp200	99	90.182	ENSCGRG00000016472	Snrnp200	99	90.291	Cricetulus_griseus_crigri
ENSSPAG00000001842	snrnp200	99	96.673	ENSCSEG00000016399	snrnp200	100	96.673	Cynoglossus_semilaevis
ENSSPAG00000001842	snrnp200	100	92.135	ENSCVAG00000017631	snrnp200	100	92.135	Cyprinodon_variegatus
ENSSPAG00000001842	snrnp200	100	94.616	ENSDARG00000077536	snrnp200	99	94.640	Danio_rerio
ENSSPAG00000001842	snrnp200	99	89.373	ENSDNOG00000011227	SNRNP200	99	89.479	Dasypus_novemcinctus
ENSSPAG00000001842	snrnp200	99	88.224	ENSDORG00000005861	Snrnp200	99	88.326	Dipodomys_ordii
ENSSPAG00000001842	snrnp200	100	73.976	FBgn0263599	l(3)72Ab	99	74.298	Drosophila_melanogaster
ENSSPAG00000001842	snrnp200	93	95.192	ENSETEG00000000162	SNRNP200	74	90.009	Echinops_telfairi
ENSSPAG00000001842	snrnp200	83	81.272	ENSEBUG00000016524	snrnp200	95	81.272	Eptatretus_burgeri
ENSSPAG00000001842	snrnp200	99	89.697	ENSEASG00005001884	SNRNP200	99	89.710	Equus_asinus_asinus
ENSSPAG00000001842	snrnp200	99	90.730	ENSECAG00000019675	SNRNP200	99	90.841	Equus_caballus
ENSSPAG00000001842	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSSPAG00000001842	snrnp200	100	96.584	ENSELUG00000018948	snrnp200	100	96.584	Esox_lucius
ENSSPAG00000001842	snrnp200	99	90.777	ENSFCAG00000010699	SNRNP200	99	90.888	Felis_catus
ENSSPAG00000001842	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSSPAG00000001842	snrnp200	99	90.496	ENSFDAG00000004683	SNRNP200	99	90.606	Fukomys_damarensis
ENSSPAG00000001842	snrnp200	100	94.663	ENSFHEG00000003786	snrnp200	100	94.663	Fundulus_heteroclitus
ENSSPAG00000001842	snrnp200	100	95.280	ENSGMOG00000004881	snrnp200	99	95.167	Gadus_morhua
ENSSPAG00000001842	snrnp200	100	94.991	ENSGAFG00000010807	snrnp200	100	94.991	Gambusia_affinis
ENSSPAG00000001842	snrnp200	100	97.992	ENSGACG00000011474	snrnp200	99	97.992	Gasterosteus_aculeatus
ENSSPAG00000001842	snrnp200	95	92.972	ENSGAGG00000016069	SNRNP200	97	98.387	Gopherus_agassizii
ENSSPAG00000001842	snrnp200	99	90.684	ENSGGOG00000005174	SNRNP200	99	90.794	Gorilla_gorilla
ENSSPAG00000001842	snrnp200	98	95.304	ENSHBUG00000011322	snrnp200	99	95.304	Haplochromis_burtoni
ENSSPAG00000001842	snrnp200	99	90.543	ENSHGLG00000006654	SNRNP200	99	90.653	Heterocephalus_glaber_female
ENSSPAG00000001842	snrnp200	99	90.543	ENSHGLG00100018594	SNRNP200	99	90.653	Heterocephalus_glaber_male
ENSSPAG00000001842	snrnp200	99	90.777	ENSSTOG00000016351	SNRNP200	99	90.888	Ictidomys_tridecemlineatus
ENSSPAG00000001842	snrnp200	99	90.449	ENSJJAG00000023659	Snrnp200	99	90.559	Jaculus_jaculus
ENSSPAG00000001842	snrnp200	100	94.914	ENSKMAG00000003665	snrnp200	100	94.914	Kryptolebias_marmoratus
ENSSPAG00000001842	snrnp200	100	98.408	ENSLBEG00000021585	snrnp200	100	98.408	Labrus_bergylta
ENSSPAG00000001842	snrnp200	82	92.149	ENSLACG00000000226	SNRNP200	99	92.459	Latimeria_chalumnae
ENSSPAG00000001842	snrnp200	100	94.294	ENSLOCG00000015198	snrnp200	99	94.317	Lepisosteus_oculatus
ENSSPAG00000001842	snrnp200	99	90.590	ENSLAFG00000015626	SNRNP200	99	90.700	Loxodonta_africana
ENSSPAG00000001842	snrnp200	99	90.637	ENSMFAG00000040174	SNRNP200	99	91.860	Macaca_fascicularis
ENSSPAG00000001842	snrnp200	99	90.637	ENSMMUG00000023261	SNRNP200	99	90.747	Macaca_mulatta
ENSSPAG00000001842	snrnp200	99	90.590	ENSMNEG00000032398	SNRNP200	99	90.700	Macaca_nemestrina
ENSSPAG00000001842	snrnp200	99	90.684	ENSMLEG00000019083	SNRNP200	99	91.860	Mandrillus_leucophaeus
ENSSPAG00000001842	snrnp200	100	97.754	ENSMAMG00000007851	snrnp200	100	97.754	Mastacembelus_armatus
ENSSPAG00000001842	snrnp200	98	95.304	ENSMZEG00005010787	snrnp200	99	95.304	Maylandia_zebra
ENSSPAG00000001842	snrnp200	97	90.518	ENSMGAG00000001831	SNRNP200	99	90.639	Meleagris_gallopavo
ENSSPAG00000001842	snrnp200	99	90.730	ENSMAUG00000011825	Snrnp200	99	90.841	Mesocricetus_auratus
ENSSPAG00000001842	snrnp200	99	90.730	ENSMICG00000004710	SNRNP200	99	90.841	Microcebus_murinus
ENSSPAG00000001842	snrnp200	99	88.904	ENSMOCG00000011814	Snrnp200	99	89.009	Microtus_ochrogaster
ENSSPAG00000001842	snrnp200	100	96.395	ENSMMOG00000014167	snrnp200	100	96.395	Mola_mola
ENSSPAG00000001842	snrnp200	99	90.637	ENSMODG00000008475	SNRNP200	99	90.700	Monodelphis_domestica
ENSSPAG00000001842	snrnp200	100	98.174	ENSMALG00000001973	snrnp200	100	98.174	Monopterus_albus
ENSSPAG00000001842	snrnp200	99	90.590	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.700	Mus_caroli
ENSSPAG00000001842	snrnp200	99	90.637	ENSMUSG00000003660	Snrnp200	99	90.747	Mus_musculus
ENSSPAG00000001842	snrnp200	99	90.637	MGP_PahariEiJ_G0025695	Snrnp200	99	90.747	Mus_pahari
ENSSPAG00000001842	snrnp200	99	90.637	MGP_SPRETEiJ_G0025170	Snrnp200	99	93.521	Mus_spretus
ENSSPAG00000001842	snrnp200	99	90.777	ENSMPUG00000008949	SNRNP200	99	90.888	Mustela_putorius_furo
ENSSPAG00000001842	snrnp200	99	87.453	ENSMLUG00000027511	-	99	87.553	Myotis_lucifugus
ENSSPAG00000001842	snrnp200	99	90.323	ENSMLUG00000010493	SNRNP200	99	90.432	Myotis_lucifugus
ENSSPAG00000001842	snrnp200	99	90.684	ENSNGAG00000021993	Snrnp200	99	90.794	Nannospalax_galili
ENSSPAG00000001842	snrnp200	91	97.913	ENSNBRG00000017960	snrnp200	98	97.913	Neolamprologus_brichardi
ENSSPAG00000001842	snrnp200	99	86.425	ENSNLEG00000000025	SNRNP200	99	86.614	Nomascus_leucogenys
ENSSPAG00000001842	snrnp200	99	93.814	ENSMEUG00000010532	SNRNP200	78	92.857	Notamacropus_eugenii
ENSSPAG00000001842	snrnp200	97	89.445	ENSOPRG00000015464	SNRNP200	99	87.459	Ochotona_princeps
ENSSPAG00000001842	snrnp200	99	90.590	ENSODEG00000008366	SNRNP200	99	90.700	Octodon_degus
ENSSPAG00000001842	snrnp200	100	97.987	ENSONIG00000010714	snrnp200	100	97.987	Oreochromis_niloticus
ENSSPAG00000001842	snrnp200	99	90.637	ENSOCUG00000009864	SNRNP200	99	90.747	Oryctolagus_cuniculus
ENSSPAG00000001842	snrnp200	99	96.579	ENSORLG00000012286	snrnp200	100	96.636	Oryzias_latipes
ENSSPAG00000001842	snrnp200	99	96.720	ENSORLG00020004648	snrnp200	100	96.720	Oryzias_latipes_hni
ENSSPAG00000001842	snrnp200	99	96.767	ENSORLG00015019114	snrnp200	100	96.767	Oryzias_latipes_hsok
ENSSPAG00000001842	snrnp200	100	97.051	ENSOMEG00000011834	snrnp200	100	97.051	Oryzias_melastigma
ENSSPAG00000001842	snrnp200	99	90.730	ENSOGAG00000006879	SNRNP200	99	90.841	Otolemur_garnettii
ENSSPAG00000001842	snrnp200	99	89.752	ENSOARG00000013949	SNRNP200	99	89.859	Ovis_aries
ENSSPAG00000001842	snrnp200	99	90.684	ENSPPAG00000041559	SNRNP200	99	90.794	Pan_paniscus
ENSSPAG00000001842	snrnp200	99	90.777	ENSPPRG00000004435	SNRNP200	99	90.888	Panthera_pardus
ENSSPAG00000001842	snrnp200	99	90.356	ENSPTIG00000006380	SNRNP200	99	90.465	Panthera_tigris_altaica
ENSSPAG00000001842	snrnp200	99	90.684	ENSPTRG00000012230	SNRNP200	99	90.794	Pan_troglodytes
ENSSPAG00000001842	snrnp200	99	90.637	ENSPANG00000006017	SNRNP200	99	90.747	Papio_anubis
ENSSPAG00000001842	snrnp200	100	95.367	ENSPKIG00000014762	snrnp200	99	95.531	Paramormyrops_kingsleyae
ENSSPAG00000001842	snrnp200	99	89.892	ENSPSIG00000008580	SNRNP200	99	89.953	Pelodiscus_sinensis
ENSSPAG00000001842	snrnp200	99	90.590	ENSPCIG00000023050	SNRNP200	99	90.653	Phascolarctos_cinereus
ENSSPAG00000001842	snrnp200	100	97.239	ENSPFOG00000015110	snrnp200	100	97.239	Poecilia_formosa
ENSSPAG00000001842	snrnp200	98	97.415	ENSPLAG00000006711	snrnp200	99	97.415	Poecilia_latipinna
ENSSPAG00000001842	snrnp200	98	97.360	ENSPMEG00000021166	snrnp200	99	97.360	Poecilia_mexicana
ENSSPAG00000001842	snrnp200	100	97.238	ENSPREG00000008875	snrnp200	100	97.238	Poecilia_reticulata
ENSSPAG00000001842	snrnp200	99	90.684	ENSPPYG00000012068	SNRNP200	99	90.794	Pongo_abelii
ENSSPAG00000001842	snrnp200	97	94.872	ENSPCAG00000008536	SNRNP200	85	97.872	Procavia_capensis
ENSSPAG00000001842	snrnp200	99	90.684	ENSPCOG00000024608	SNRNP200	99	90.794	Propithecus_coquereli
ENSSPAG00000001842	snrnp200	96	91.095	ENSPVAG00000005860	SNRNP200	92	91.340	Pteropus_vampyrus
ENSSPAG00000001842	snrnp200	100	93.184	ENSPNYG00000017476	snrnp200	100	93.184	Pundamilia_nyererei
ENSSPAG00000001842	snrnp200	100	90.735	ENSPNAG00000010998	snrnp200	99	90.789	Pygocentrus_nattereri
ENSSPAG00000001842	snrnp200	99	90.730	ENSRNOG00000012157	Snrnp200	99	90.841	Rattus_norvegicus
ENSSPAG00000001842	snrnp200	99	90.684	ENSRBIG00000044690	-	99	90.794	Rhinopithecus_bieti
ENSSPAG00000001842	snrnp200	99	90.684	ENSRROG00000037952	-	99	90.794	Rhinopithecus_roxellana
ENSSPAG00000001842	snrnp200	99	90.637	ENSSBOG00000035471	SNRNP200	99	90.747	Saimiri_boliviensis_boliviensis
ENSSPAG00000001842	snrnp200	97	90.427	ENSSHAG00000000758	SNRNP200	99	90.492	Sarcophilus_harrisii
ENSSPAG00000001842	snrnp200	99	95.489	ENSSFOG00015018826	snrnp200	99	95.489	Scleropages_formosus
ENSSPAG00000001842	snrnp200	100	98.596	ENSSMAG00000005463	snrnp200	100	98.596	Scophthalmus_maximus
ENSSPAG00000001842	snrnp200	100	99.391	ENSSDUG00000021410	snrnp200	100	99.391	Seriola_dumerili
ENSSPAG00000001842	snrnp200	100	99.110	ENSSLDG00000010884	snrnp200	100	99.110	Seriola_lalandi_dorsalis
ENSSPAG00000001842	snrnp200	95	88.740	ENSSARG00000010728	SNRNP200	96	88.710	Sorex_araneus
ENSSPAG00000001842	snrnp200	99	91.058	ENSSPUG00000003726	-	99	91.123	Sphenodon_punctatus
ENSSPAG00000001842	snrnp200	99	90.777	ENSSSCG00000008127	SNRNP200	99	90.888	Sus_scrofa
ENSSPAG00000001842	snrnp200	99	82.331	ENSTGUG00000014475	-	100	82.331	Taeniopygia_guttata
ENSSPAG00000001842	snrnp200	100	97.238	ENSTRUG00000001307	snrnp200	100	97.238	Takifugu_rubripes
ENSSPAG00000001842	snrnp200	99	85.040	ENSTNIG00000004320	snrnp200	100	85.040	Tetraodon_nigroviridis
ENSSPAG00000001842	snrnp200	82	93.427	ENSTBEG00000003329	-	67	93.427	Tupaia_belangeri
ENSSPAG00000001842	snrnp200	99	90.543	ENSTTRG00000004983	SNRNP200	99	90.653	Tursiops_truncatus
ENSSPAG00000001842	snrnp200	82	82.977	ENSUAMG00000008395	-	95	83.430	Ursus_americanus
ENSSPAG00000001842	snrnp200	99	90.777	ENSUMAG00000012385	SNRNP200	99	90.888	Ursus_maritimus
ENSSPAG00000001842	snrnp200	87	93.568	ENSVPAG00000006434	SNRNP200	66	93.568	Vicugna_pacos
ENSSPAG00000001842	snrnp200	99	90.565	ENSVVUG00000026247	SNRNP200	99	90.675	Vulpes_vulpes
ENSSPAG00000001842	snrnp200	99	90.505	ENSXETG00000001243	snrnp200	99	90.568	Xenopus_tropicalis
ENSSPAG00000001842	snrnp200	99	96.310	ENSXMAG00000002058	snrnp200	98	97.535	Xiphophorus_maculatus