EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000001850 (Gene tree)
Gene ID: 103357173
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 14112 bases
Position: chrKK580309.1:83681-97792
Accession: 103357173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000002397	RNase_Zc3h12a	PF11977.8	5.1e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000002435	-	3510	XM_008281602	ENSSPAP00000002397	915 (aa)	XP_008279824	UPI000497A24C

Gene Model

Click here to download ENSSPAG00000001850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000001850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000001850	-	99	46.667	ENSSPAG00000009485	-	99	44.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000001850	-	73	52.348	ENSAPOG00000015355	-	68	54.644	Acanthochromis_polyacanthus
ENSSPAG00000001850	-	93	81.899	ENSAPOG00000001632	-	99	86.079	Acanthochromis_polyacanthus
ENSSPAG00000001850	-	73	59.016	ENSACIG00000001362	-	83	58.065	Amphilophus_citrinellus
ENSSPAG00000001850	-	99	46.085	ENSAOCG00000003866	-	100	72.222	Amphiprion_ocellaris
ENSSPAG00000001850	-	99	45.902	ENSAPEG00000005727	-	94	67.532	Amphiprion_percula
ENSSPAG00000001850	-	72	47.376	ENSAPEG00000018582	-	99	46.154	Amphiprion_percula
ENSSPAG00000001850	-	100	70.614	ENSATEG00000002260	-	93	88.123	Anabas_testudineus
ENSSPAG00000001850	-	99	45.935	ENSATEG00000004134	-	99	45.050	Anabas_testudineus
ENSSPAG00000001850	-	99	45.626	ENSACLG00000027924	-	99	46.421	Astatotilapia_calliptera
ENSSPAG00000001850	-	100	71.919	ENSACLG00000018493	-	100	71.383	Astatotilapia_calliptera
ENSSPAG00000001850	-	84	46.181	ENSCSEG00000010073	-	80	80.000	Cynoglossus_semilaevis
ENSSPAG00000001850	-	99	62.513	ENSCSEG00000008542	-	99	62.621	Cynoglossus_semilaevis
ENSSPAG00000001850	-	99	44.786	ENSCVAG00000002328	-	99	46.008	Cyprinodon_variegatus
ENSSPAG00000001850	-	52	61.759	ENSELUG00000009319	-	95	48.363	Esox_lucius
ENSSPAG00000001850	-	99	57.447	ENSELUG00000005470	-	99	57.917	Esox_lucius
ENSSPAG00000001850	-	94	66.667	ENSFHEG00000021225	-	85	68.987	Fundulus_heteroclitus
ENSSPAG00000001850	-	72	53.443	ENSGMOG00000017975	-	99	53.544	Gadus_morhua
ENSSPAG00000001850	-	55	55.714	ENSGALG00000002021	ZC3H12A	60	63.720	Gallus_gallus
ENSSPAG00000001850	-	99	43.932	ENSGAFG00000005290	-	99	45.804	Gambusia_affinis
ENSSPAG00000001850	-	72	46.334	ENSGACG00000014201	-	99	45.693	Gasterosteus_aculeatus
ENSSPAG00000001850	-	72	63.897	ENSGACG00000001339	-	100	63.595	Gasterosteus_aculeatus
ENSSPAG00000001850	-	99	45.427	ENSHBUG00000006831	-	99	46.230	Haplochromis_burtoni
ENSSPAG00000001850	-	99	43.598	ENSHCOG00000008878	-	82	47.132	Hippocampus_comes
ENSSPAG00000001850	-	99	46.878	ENSKMAG00000011694	-	99	46.334	Kryptolebias_marmoratus
ENSSPAG00000001850	-	100	71.413	ENSLBEG00000012710	-	100	70.771	Labrus_bergylta
ENSSPAG00000001850	-	84	48.860	ENSLBEG00000012554	-	84	72.185	Labrus_bergylta
ENSSPAG00000001850	-	84	48.980	ENSLBEG00000003547	-	99	44.091	Labrus_bergylta
ENSSPAG00000001850	-	99	46.766	ENSMAMG00000021794	-	99	71.898	Mastacembelus_armatus
ENSSPAG00000001850	-	100	72.562	ENSMAMG00000020372	-	100	72.026	Mastacembelus_armatus
ENSSPAG00000001850	-	100	71.811	ENSMZEG00005019137	-	99	73.496	Maylandia_zebra
ENSSPAG00000001850	-	99	45.726	ENSMZEG00005007718	-	99	46.521	Maylandia_zebra
ENSSPAG00000001850	-	55	54.953	ENSMGAG00000003371	ZC3H12A	71	62.575	Meleagris_gallopavo
ENSSPAG00000001850	-	87	48.739	ENSMMOG00000005728	-	86	69.799	Mola_mola
ENSSPAG00000001850	-	100	65.736	ENSMMOG00000019526	-	94	65.161	Mola_mola
ENSSPAG00000001850	-	66	54.025	ENSMALG00000010501	-	99	44.444	Monopterus_albus
ENSSPAG00000001850	-	100	71.030	ENSNBRG00000012175	-	90	81.529	Neolamprologus_brichardi
ENSSPAG00000001850	-	99	45.331	ENSNBRG00000006978	-	99	46.588	Neolamprologus_brichardi
ENSSPAG00000001850	-	99	45.392	ENSONIG00000012268	-	99	50.809	Oreochromis_niloticus
ENSSPAG00000001850	-	99	41.553	ENSORLG00000029243	-	96	50.122	Oryzias_latipes
ENSSPAG00000001850	-	99	46.012	ENSORLG00020017005	-	99	46.020	Oryzias_latipes_hni
ENSSPAG00000001850	-	99	45.685	ENSORLG00015015211	-	99	45.371	Oryzias_latipes_hsok
ENSSPAG00000001850	-	99	45.035	ENSOMEG00000006666	-	86	49.102	Oryzias_melastigma
ENSSPAG00000001850	-	82	65.720	ENSPMGG00000020126	-	79	65.208	Periophthalmus_magnuspinnatus
ENSSPAG00000001850	-	99	44.323	ENSPLAG00000009867	-	99	45.854	Poecilia_latipinna
ENSSPAG00000001850	-	99	44.257	ENSPMEG00000006624	-	99	46.293	Poecilia_mexicana
ENSSPAG00000001850	-	100	65.841	ENSPMEG00000011676	-	100	65.733	Poecilia_mexicana
ENSSPAG00000001850	-	98	65.423	ENSPREG00000001607	-	78	86.531	Poecilia_reticulata
ENSSPAG00000001850	-	99	44.578	ENSPREG00000010838	-	99	46.000	Poecilia_reticulata
ENSSPAG00000001850	-	100	74.043	ENSSMAG00000007258	-	100	74.149	Scophthalmus_maximus
ENSSPAG00000001850	-	99	46.055	ENSSMAG00000007545	-	82	49.762	Scophthalmus_maximus
ENSSPAG00000001850	-	100	72.198	ENSSDUG00000013237	-	99	78.205	Seriola_dumerili
ENSSPAG00000001850	-	99	46.004	ENSSDUG00000021864	-	99	45.544	Seriola_dumerili
ENSSPAG00000001850	-	100	75.536	ENSSLDG00000004886	-	100	76.502	Seriola_lalandi_dorsalis
ENSSPAG00000001850	-	99	45.648	ENSSLDG00000012268	-	99	45.935	Seriola_lalandi_dorsalis
ENSSPAG00000001850	-	99	44.356	ENSTRUG00000022519	-	99	44.411	Takifugu_rubripes
ENSSPAG00000001850	-	74	48.918	ENSTNIG00000014519	-	99	71.698	Tetraodon_nigroviridis
ENSSPAG00000001850	-	99	43.812	ENSXMAG00000027171	-	99	45.262	Xiphophorus_maculatus
ENSSPAG00000001850	-	99	64.091	ENSXMAG00000014715	-	96	86.585	Xiphophorus_maculatus