EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000002062 (Gene tree)
Gene ID: 103358257
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: ras-related protein Rab-7L1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 6234 bases
Position: chrKK580370.1:492982-499215
Accession: 103358257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000002668	MMR_HSR1	PF01926.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000002710	RAB29-201	3500	XM_008283151	ENSSPAP00000002668	206 (aa)	XP_008281373	UPI0004955BF5

Gene Model

Click here to download ENSSPAG00000002062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000002062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000002062	RAB29	76	33.962	ENSSPAG00000006404	zgc:101559	66	33.962
ENSSPAG00000002062	RAB29	84	32.000	ENSSPAG00000014559	-	78	32.000
ENSSPAG00000002062	RAB29	67	35.000	ENSSPAG00000002801	rab34b	52	35.000
ENSSPAG00000002062	RAB29	84	32.571	ENSSPAG00000017313	rab11ba	78	32.571
ENSSPAG00000002062	RAB29	83	32.370	ENSSPAG00000011419	rab11bb	77	32.370
ENSSPAG00000002062	RAB29	82	33.529	ENSSPAG00000013533	zgc:171927	77	33.529
ENSSPAG00000002062	RAB29	83	32.558	ENSSPAG00000023185	RAB15	78	32.558
ENSSPAG00000002062	RAB29	90	36.364	ENSSPAG00000022440	-	89	36.364
ENSSPAG00000002062	RAB29	79	31.548	ENSSPAG00000010224	-	72	32.121
ENSSPAG00000002062	RAB29	82	36.095	ENSSPAG00000010822	rab12	82	33.491
ENSSPAG00000002062	RAB29	93	33.838	ENSSPAG00000001423	-	95	33.838
ENSSPAG00000002062	RAB29	82	35.882	ENSSPAG00000006302	si:dkey-16l2.16	73	37.500
ENSSPAG00000002062	RAB29	86	33.702	ENSSPAG00000013422	rab30	86	33.702
ENSSPAG00000002062	RAB29	90	35.000	ENSSPAG00000004801	rab33ba	81	35.000
ENSSPAG00000002062	RAB29	86	31.073	ENSSPAG00000021333	rab22a	89	31.073
ENSSPAG00000002062	RAB29	99	31.220	ENSSPAG00000022676	rab1ba	98	31.220
ENSSPAG00000002062	RAB29	99	35.122	ENSSPAG00000008400	rab35b	98	35.610
ENSSPAG00000002062	RAB29	91	30.198	ENSSPAG00000015817	rab25a	93	30.198
ENSSPAG00000002062	RAB29	82	34.524	ENSSPAG00000020875	rab18b	80	34.524
ENSSPAG00000002062	RAB29	87	32.597	ENSSPAG00000012060	rab25b	88	30.939
ENSSPAG00000002062	RAB29	91	34.031	ENSSPAG00000005141	-	86	34.031
ENSSPAG00000002062	RAB29	89	33.152	ENSSPAG00000019393	RAB11A	86	33.152
ENSSPAG00000002062	RAB29	93	32.828	ENSSPAG00000023345	RAB7A	95	32.828
ENSSPAG00000002062	RAB29	90	33.690	ENSSPAG00000015564	rab1ab	88	32.057
ENSSPAG00000002062	RAB29	81	32.335	ENSSPAG00000006436	rab5c	89	30.288
ENSSPAG00000002062	RAB29	87	35.714	ENSSPAG00000015211	rab15	83	35.714
ENSSPAG00000002062	RAB29	94	33.663	ENSSPAG00000022927	rab14	91	33.663
ENSSPAG00000002062	RAB29	88	32.240	ENSSPAG00000015678	rab5aa	79	32.240
ENSSPAG00000002062	RAB29	98	30.583	ENSSPAG00000005785	rab33a	87	30.583
ENSSPAG00000002062	RAB29	85	32.240	ENSSPAG00000012955	si:dkey-34d22.5	81	32.240
ENSSPAG00000002062	RAB29	86	36.158	ENSSPAG00000011224	-	81	36.158
ENSSPAG00000002062	RAB29	82	35.294	ENSSPAG00000012564	-	81	35.294
ENSSPAG00000002062	RAB29	84	30.857	ENSSPAG00000012044	rab11al	78	30.857
ENSSPAG00000002062	RAB29	83	36.257	ENSSPAG00000010373	rab23	85	36.559
ENSSPAG00000002062	RAB29	59	32.787	ENSSPAG00000015869	arl8a	61	32.787
ENSSPAG00000002062	RAB29	83	32.948	ENSSPAG00000016167	rab42a	78	32.948
ENSSPAG00000002062	RAB29	98	32.673	ENSSPAG00000009806	rab9b	89	32.673
ENSSPAG00000002062	RAB29	98	30.049	ENSSPAG00000009276	rab6bb	93	30.049
ENSSPAG00000002062	RAB29	84	34.857	ENSSPAG00000010771	RAB39B	80	34.857
ENSSPAG00000002062	RAB29	93	35.567	ENSSPAG00000007900	rab9a	94	35.567
ENSSPAG00000002062	RAB29	84	34.286	ENSSPAG00000010919	-	80	34.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000002062	RAB29	100	75.243	ENSATEG00000024739	RAB29	100	75.243	Anabas_testudineus
ENSSPAG00000002062	RAB29	80	80.000	ENSACLG00000008602	RAB29	100	80.000	Astatotilapia_calliptera
ENSSPAG00000002062	RAB29	100	72.330	ENSCVAG00000014038	RAB29	100	72.330	Cyprinodon_variegatus
ENSSPAG00000002062	RAB29	98	51.980	ENSEBUG00000002259	RAB29	96	51.980	Eptatretus_burgeri
ENSSPAG00000002062	RAB29	87	70.000	ENSFHEG00000015993	RAB29	88	70.000	Fundulus_heteroclitus
ENSSPAG00000002062	RAB29	80	70.732	ENSGMOG00000018475	RAB29	99	70.732	Gadus_morhua
ENSSPAG00000002062	RAB29	100	74.757	ENSGAFG00000000629	RAB29	100	74.757	Gambusia_affinis
ENSSPAG00000002062	RAB29	100	72.330	ENSGACG00000010473	RAB29	99	72.330	Gasterosteus_aculeatus
ENSSPAG00000002062	RAB29	100	75.000	ENSHBUG00000012594	RAB29	100	75.000	Haplochromis_burtoni
ENSSPAG00000002062	RAB29	97	70.854	ENSKMAG00000017150	-	89	70.854	Kryptolebias_marmoratus
ENSSPAG00000002062	RAB29	100	76.214	ENSLBEG00000006152	-	100	76.214	Labrus_bergylta
ENSSPAG00000002062	RAB29	100	76.214	ENSLBEG00000018812	RAB29	100	76.214	Labrus_bergylta
ENSSPAG00000002062	RAB29	99	53.431	ENSLACG00000002523	RAB29	98	53.431	Latimeria_chalumnae
ENSSPAG00000002062	RAB29	100	74.272	ENSMAMG00000006963	RAB29	100	74.272	Mastacembelus_armatus
ENSSPAG00000002062	RAB29	100	74.038	ENSMZEG00005026799	RAB29	100	74.038	Maylandia_zebra
ENSSPAG00000002062	RAB29	100	76.699	ENSMALG00000018436	RAB29	90	76.699	Monopterus_albus
ENSSPAG00000002062	RAB29	78	78.261	ENSNBRG00000008714	RAB29	71	78.261	Neolamprologus_brichardi
ENSSPAG00000002062	RAB29	100	75.000	ENSONIG00000014892	RAB29	100	75.000	Oreochromis_niloticus
ENSSPAG00000002062	RAB29	100	69.903	ENSORLG00000027892	RAB29	100	69.903	Oryzias_latipes
ENSSPAG00000002062	RAB29	100	67.961	ENSORLG00020005240	RAB29	100	67.961	Oryzias_latipes_hni
ENSSPAG00000002062	RAB29	100	68.932	ENSORLG00015020441	-	100	68.932	Oryzias_latipes_hsok
ENSSPAG00000002062	RAB29	100	70.388	ENSOMEG00000000336	RAB29	100	70.388	Oryzias_melastigma
ENSSPAG00000002062	RAB29	100	68.447	ENSPMGG00000008290	-	100	68.447	Periophthalmus_magnuspinnatus
ENSSPAG00000002062	RAB29	100	68.932	ENSPFOG00000013066	RAB29	99	68.932	Poecilia_formosa
ENSSPAG00000002062	RAB29	99	69.458	ENSPLAG00000002600	RAB29	95	69.458	Poecilia_latipinna
ENSSPAG00000002062	RAB29	100	69.903	ENSPMEG00000021807	RAB29	100	69.903	Poecilia_mexicana
ENSSPAG00000002062	RAB29	100	71.845	ENSPREG00000020276	RAB29	100	71.845	Poecilia_reticulata
ENSSPAG00000002062	RAB29	100	74.038	ENSPNYG00000015355	RAB29	100	74.038	Pundamilia_nyererei
ENSSPAG00000002062	RAB29	100	73.430	ENSSDUG00000006543	RAB29	100	73.430	Seriola_dumerili
ENSSPAG00000002062	RAB29	99	51.961	ENSSPUG00000015007	RAB29	98	51.961	Sphenodon_punctatus
ENSSPAG00000002062	RAB29	100	72.330	ENSXCOG00000016370	RAB29	100	72.330	Xiphophorus_couchianus
ENSSPAG00000002062	RAB29	100	72.330	ENSXMAG00000029823	RAB29	100	72.330	Xiphophorus_maculatus