EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000002362 (Gene tree)
Gene ID: 103362762
Gene Symbol: srsf6a
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 3580 bases
Position: chrKK580672.1:78512-82091
Accession: 103362762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000003266	RRM_1	PF00076.22	2.3e-32	1	2
ENSSPAP00000003266	RRM_1	PF00076.22	2.3e-32	2	2
ENSSPAP00000003241	RRM_1	PF00076.22	5e-32	1	2
ENSSPAP00000003241	RRM_1	PF00076.22	5e-32	2	2
ENSSPAP00000003286	RRM_1	PF00076.22	8.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000003297	-	1098	XM_008289240	ENSSPAP00000003241	365 (aa)	XP_008287462	-
ENSSPAT00000003342	-	756	-	ENSSPAP00000003286	251 (aa)	-	-
ENSSPAT00000003322	-	852	-	ENSSPAP00000003266	283 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000002362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000002362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000002362	srsf6a	65	63.587	ENSSPAG00000002821	srsf5a	94	52.669
ENSSPAG00000002362	srsf6a	82	66.524	ENSSPAG00000014538	srsf4	83	71.212
ENSSPAG00000002362	srsf6a	65	63.388	ENSSPAG00000015325	srsf5b	83	48.364
ENSSPAG00000002362	srsf6a	55	41.981	ENSSPAG00000014152	-	79	42.029
ENSSPAG00000002362	srsf6a	61	41.573	ENSSPAG00000022562	-	91	38.672
ENSSPAG00000002362	srsf6a	65	38.579	ENSSPAG00000006285	srsf9	74	40.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000002362	srsf6a	67	86.243	ENSG00000124193	SRSF6	98	61.871	Homo_sapiens
ENSSPAG00000002362	srsf6a	73	76.852	ENSAPOG00000000810	srsf6a	92	84.722	Acanthochromis_polyacanthus
ENSSPAG00000002362	srsf6a	67	69.474	ENSAMEG00000003710	SRSF6	76	59.925	Ailuropoda_melanoleuca
ENSSPAG00000002362	srsf6a	100	63.836	ENSACIG00000020091	-	95	83.721	Amphilophus_citrinellus
ENSSPAG00000002362	srsf6a	91	77.365	ENSACIG00000023658	-	90	75.676	Amphilophus_citrinellus
ENSSPAG00000002362	srsf6a	66	84.574	ENSAOCG00000004309	-	83	70.111	Amphiprion_ocellaris
ENSSPAG00000002362	srsf6a	86	96.277	ENSAPEG00000013086	-	93	90.741	Amphiprion_percula
ENSSPAG00000002362	srsf6a	69	82.653	ENSAPEG00000020746	-	99	65.845	Amphiprion_percula
ENSSPAG00000002362	srsf6a	66	83.422	ENSATEG00000007255	-	92	71.705	Anabas_testudineus
ENSSPAG00000002362	srsf6a	54	86.842	ENSAPLG00000014472	SRSF6	73	67.241	Anas_platyrhynchos
ENSSPAG00000002362	srsf6a	66	86.170	ENSACAG00000002061	SRSF6	69	72.308	Anolis_carolinensis
ENSSPAG00000002362	srsf6a	67	85.714	ENSANAG00000024080	SRSF6	98	61.871	Aotus_nancymaae
ENSSPAG00000002362	srsf6a	92	67.913	ENSAMXG00000042692	-	96	88.889	Astyanax_mexicanus
ENSSPAG00000002362	srsf6a	88	90.957	ENSAMXG00000003101	-	68	74.231	Astyanax_mexicanus
ENSSPAG00000002362	srsf6a	67	86.243	ENSBTAG00000008527	SRSF6	98	62.590	Bos_taurus
ENSSPAG00000002362	srsf6a	67	86.243	ENSCJAG00000048403	SRSF6	96	69.811	Callithrix_jacchus
ENSSPAG00000002362	srsf6a	67	86.243	ENSCAFG00000009289	SRSF6	98	62.590	Canis_familiaris
ENSSPAG00000002362	srsf6a	67	86.243	ENSCAFG00020013559	SRSF6	98	62.590	Canis_lupus_dingo
ENSSPAG00000002362	srsf6a	67	86.243	ENSCHIG00000015890	-	98	62.590	Capra_hircus
ENSSPAG00000002362	srsf6a	67	85.185	ENSCHIG00000009148	-	75	69.925	Capra_hircus
ENSSPAG00000002362	srsf6a	67	64.021	ENSTSYG00000026476	SRSF6	83	54.315	Carlito_syrichta
ENSSPAG00000002362	srsf6a	67	80.952	ENSCPOG00000011761	SRSF6	98	61.871	Cavia_porcellus
ENSSPAG00000002362	srsf6a	67	85.714	ENSCCAG00000026018	-	98	61.871	Cebus_capucinus
ENSSPAG00000002362	srsf6a	67	75.263	ENSCCAG00000018540	-	84	61.798	Cebus_capucinus
ENSSPAG00000002362	srsf6a	67	86.243	ENSCATG00000030794	SRSF6	98	61.871	Cercocebus_atys
ENSSPAG00000002362	srsf6a	67	86.243	ENSCLAG00000010247	SRSF6	98	61.871	Chinchilla_lanigera
ENSSPAG00000002362	srsf6a	67	86.243	ENSCSAG00000014022	SRSF6	76	70.566	Chlorocebus_sabaeus
ENSSPAG00000002362	srsf6a	67	86.772	ENSCPBG00000018200	SRSF6	77	70.787	Chrysemys_picta_bellii
ENSSPAG00000002362	srsf6a	67	85.185	ENSCANG00000037774	-	76	69.811	Colobus_angolensis_palliatus
ENSSPAG00000002362	srsf6a	67	64.021	ENSCANG00000042529	-	85	53.000	Colobus_angolensis_palliatus
ENSSPAG00000002362	srsf6a	67	86.243	ENSCGRG00001022339	Srsf6	98	61.871	Cricetulus_griseus_chok1gshd
ENSSPAG00000002362	srsf6a	66	93.085	ENSDARG00000016783	srsf6b	82	96.154	Danio_rerio
ENSSPAG00000002362	srsf6a	66	77.128	ENSDARG00000013729	srsf6a	81	68.750	Danio_rerio
ENSSPAG00000002362	srsf6a	67	85.714	ENSDNOG00000008410	SRSF6	75	70.455	Dasypus_novemcinctus
ENSSPAG00000002362	srsf6a	67	86.243	ENSDORG00000028378	Srsf6	98	61.871	Dipodomys_ordii
ENSSPAG00000002362	srsf6a	67	82.011	ENSETEG00000006221	SRSF6	75	68.045	Echinops_telfairi
ENSSPAG00000002362	srsf6a	67	86.243	ENSEASG00005023429	SRSF6	76	70.412	Equus_asinus_asinus
ENSSPAG00000002362	srsf6a	67	86.243	ENSECAG00000023932	SRSF6	81	70.412	Equus_caballus
ENSSPAG00000002362	srsf6a	92	72.917	ENSELUG00000013506	SRSF6	94	75.874	Esox_lucius
ENSSPAG00000002362	srsf6a	51	87.097	ENSELUG00000024182	SRSF6	90	89.600	Esox_lucius
ENSSPAG00000002362	srsf6a	67	86.243	ENSFCAG00000032814	SRSF6	76	70.677	Felis_catus
ENSSPAG00000002362	srsf6a	67	64.021	ENSFDAG00000012191	SRSF6	71	48.679	Fukomys_damarensis
ENSSPAG00000002362	srsf6a	88	79.911	ENSFHEG00000023065	srsf6a	93	69.811	Fundulus_heteroclitus
ENSSPAG00000002362	srsf6a	65	73.370	ENSGMOG00000006105	srsf6a	86	60.606	Gadus_morhua
ENSSPAG00000002362	srsf6a	64	91.765	ENSGMOG00000014458	srsf6a	51	84.656	Gadus_morhua
ENSSPAG00000002362	srsf6a	66	85.106	ENSGALG00000000990	SRSF6	98	59.441	Gallus_gallus
ENSSPAG00000002362	srsf6a	86	89.894	ENSGACG00000006084	srsf6a	84	79.630	Gasterosteus_aculeatus
ENSSPAG00000002362	srsf6a	67	86.772	ENSGAGG00000003238	SRSF6	77	70.787	Gopherus_agassizii
ENSSPAG00000002362	srsf6a	67	86.243	ENSGGOG00000009808	SRSF6	98	61.871	Gorilla_gorilla
ENSSPAG00000002362	srsf6a	66	82.979	ENSHBUG00000006386	-	82	70.943	Haplochromis_burtoni
ENSSPAG00000002362	srsf6a	69	67.677	ENSHGLG00000007701	-	57	67.568	Heterocephalus_glaber_female
ENSSPAG00000002362	srsf6a	67	86.243	ENSHGLG00000007348	SRSF6	98	61.871	Heterocephalus_glaber_female
ENSSPAG00000002362	srsf6a	67	64.021	ENSHGLG00100005043	SRSF6	71	48.679	Heterocephalus_glaber_male
ENSSPAG00000002362	srsf6a	100	74.026	ENSHCOG00000002740	srsf6a	94	81.481	Hippocampus_comes
ENSSPAG00000002362	srsf6a	64	82.320	ENSIPUG00000016856	SRSF6	85	68.519	Ictalurus_punctatus
ENSSPAG00000002362	srsf6a	91	81.041	ENSIPUG00000004776	-	90	78.439	Ictalurus_punctatus
ENSSPAG00000002362	srsf6a	67	86.243	ENSSTOG00000010866	SRSF6	98	61.871	Ictidomys_tridecemlineatus
ENSSPAG00000002362	srsf6a	94	92.727	ENSKMAG00000011934	srsf6a	92	76.056	Kryptolebias_marmoratus
ENSSPAG00000002362	srsf6a	83	90.374	ENSLBEG00000007356	srsf6a	82	83.333	Labrus_bergylta
ENSSPAG00000002362	srsf6a	66	77.540	ENSLACG00000009389	-	51	63.636	Latimeria_chalumnae
ENSSPAG00000002362	srsf6a	91	68.060	ENSLACG00000005466	SRSF6	78	69.288	Latimeria_chalumnae
ENSSPAG00000002362	srsf6a	67	86.243	ENSMFAG00000036925	SRSF6	98	61.871	Macaca_fascicularis
ENSSPAG00000002362	srsf6a	67	86.243	ENSMMUG00000006742	SRSF6	98	61.871	Macaca_mulatta
ENSSPAG00000002362	srsf6a	67	85.185	ENSMNEG00000027392	-	98	61.151	Macaca_nemestrina
ENSSPAG00000002362	srsf6a	67	85.714	ENSMNEG00000038270	-	76	70.189	Macaca_nemestrina
ENSSPAG00000002362	srsf6a	86	97.872	ENSMAMG00000017161	srsf6a	86	94.444	Mastacembelus_armatus
ENSSPAG00000002362	srsf6a	66	82.979	ENSMZEG00005008032	-	85	71.071	Maylandia_zebra
ENSSPAG00000002362	srsf6a	66	86.022	ENSMZEG00005020658	-	96	68.166	Maylandia_zebra
ENSSPAG00000002362	srsf6a	67	85.185	ENSMICG00000008537	SRSF6	98	61.871	Microcebus_murinus
ENSSPAG00000002362	srsf6a	67	86.772	ENSMODG00000003107	SRSF6	77	70.412	Monodelphis_domestica
ENSSPAG00000002362	srsf6a	100	77.834	ENSMALG00000003702	srsf6a	100	77.834	Monopterus_albus
ENSSPAG00000002362	srsf6a	67	86.243	MGP_CAROLIEiJ_G0024606	Srsf6	98	61.871	Mus_caroli
ENSSPAG00000002362	srsf6a	67	86.243	ENSMUSG00000016921	Srsf6	98	61.871	Mus_musculus
ENSSPAG00000002362	srsf6a	67	86.243	MGP_PahariEiJ_G0026050	Srsf6	98	61.871	Mus_pahari
ENSSPAG00000002362	srsf6a	67	86.243	MGP_SPRETEiJ_G0025528	Srsf6	98	61.871	Mus_spretus
ENSSPAG00000002362	srsf6a	67	86.243	ENSMPUG00000017692	SRSF6	90	70.677	Mustela_putorius_furo
ENSSPAG00000002362	srsf6a	67	62.564	ENSMLUG00000016618	SRSF6	75	53.558	Myotis_lucifugus
ENSSPAG00000002362	srsf6a	67	86.243	ENSNGAG00000017560	Srsf6	98	61.871	Nannospalax_galili
ENSSPAG00000002362	srsf6a	96	62.810	ENSNBRG00000014709	-	57	86.486	Neolamprologus_brichardi
ENSSPAG00000002362	srsf6a	84	96.809	ENSNBRG00000001846	-	76	98.919	Neolamprologus_brichardi
ENSSPAG00000002362	srsf6a	67	86.243	ENSNLEG00000006524	SRSF6	98	61.871	Nomascus_leucogenys
ENSSPAG00000002362	srsf6a	67	86.772	ENSMEUG00000014615	SRSF6	86	71.053	Notamacropus_eugenii
ENSSPAG00000002362	srsf6a	96	84.615	ENSONIG00000001925	-	80	98.919	Oreochromis_niloticus
ENSSPAG00000002362	srsf6a	66	84.574	ENSONIG00000020247	-	74	72.519	Oreochromis_niloticus
ENSSPAG00000002362	srsf6a	50	52.486	ENSOCUG00000023999	-	96	46.484	Oryctolagus_cuniculus
ENSSPAG00000002362	srsf6a	67	68.000	ENSOCUG00000009785	-	88	56.679	Oryctolagus_cuniculus
ENSSPAG00000002362	srsf6a	86	76.923	ENSORLG00000003530	srsf6a	92	57.209	Oryzias_latipes
ENSSPAG00000002362	srsf6a	56	70.253	ENSORLG00020017506	srsf6a	91	71.698	Oryzias_latipes_hni
ENSSPAG00000002362	srsf6a	86	76.923	ENSORLG00015009410	srsf6a	92	57.209	Oryzias_latipes_hsok
ENSSPAG00000002362	srsf6a	86	74.074	ENSOMEG00000006001	srsf6a	78	74.074	Oryzias_melastigma
ENSSPAG00000002362	srsf6a	67	85.185	ENSOGAG00000014468	SRSF6	75	69.925	Otolemur_garnettii
ENSSPAG00000002362	srsf6a	67	80.729	ENSOARG00000003117	SRSF6	75	65.926	Ovis_aries
ENSSPAG00000002362	srsf6a	67	70.899	ENSPPAG00000043131	-	95	55.482	Pan_paniscus
ENSSPAG00000002362	srsf6a	67	85.185	ENSPPAG00000034327	-	75	70.189	Pan_paniscus
ENSSPAG00000002362	srsf6a	67	86.243	ENSPPRG00000008917	SRSF6	76	70.677	Panthera_pardus
ENSSPAG00000002362	srsf6a	66	79.255	ENSPTIG00000021305	-	56	63.469	Panthera_tigris_altaica
ENSSPAG00000002362	srsf6a	67	86.243	ENSPTRG00000044686	-	98	61.871	Pan_troglodytes
ENSSPAG00000002362	srsf6a	67	70.899	ENSPTRG00000046274	-	95	55.482	Pan_troglodytes
ENSSPAG00000002362	srsf6a	67	86.243	ENSPANG00000035224	SRSF6	98	61.871	Papio_anubis
ENSSPAG00000002362	srsf6a	87	91.489	ENSPKIG00000018463	-	85	88.108	Paramormyrops_kingsleyae
ENSSPAG00000002362	srsf6a	55	60.897	ENSPKIG00000015703	-	95	61.688	Paramormyrops_kingsleyae
ENSSPAG00000002362	srsf6a	94	74.052	ENSPMGG00000014963	srsf6a	92	72.115	Periophthalmus_magnuspinnatus
ENSSPAG00000002362	srsf6a	67	86.772	ENSPCIG00000003820	SRSF6	98	61.871	Phascolarctos_cinereus
ENSSPAG00000002362	srsf6a	66	79.787	ENSPCIG00000022430	-	54	63.370	Phascolarctos_cinereus
ENSSPAG00000002362	srsf6a	86	94.828	ENSPFOG00000006437	srsf6a	65	95.187	Poecilia_formosa
ENSSPAG00000002362	srsf6a	86	92.553	ENSPLAG00000009243	srsf6a	79	96.032	Poecilia_latipinna
ENSSPAG00000002362	srsf6a	86	78.378	ENSPMEG00000006042	SRSF6	91	83.333	Poecilia_mexicana
ENSSPAG00000002362	srsf6a	74	74.869	ENSPMEG00000006056	SRSF6	89	55.801	Poecilia_mexicana
ENSSPAG00000002362	srsf6a	67	86.243	ENSPPYG00000011019	SRSF6	75	70.566	Pongo_abelii
ENSSPAG00000002362	srsf6a	67	84.656	ENSPCAG00000010954	SRSF6	78	69.549	Procavia_capensis
ENSSPAG00000002362	srsf6a	67	85.714	ENSPCOG00000026364	SRSF6	98	61.871	Propithecus_coquereli
ENSSPAG00000002362	srsf6a	67	85.714	ENSPVAG00000015232	SRSF6	76	70.301	Pteropus_vampyrus
ENSSPAG00000002362	srsf6a	96	62.397	ENSPNYG00000004944	-	57	86.486	Pundamilia_nyererei
ENSSPAG00000002362	srsf6a	84	96.809	ENSPNYG00000011272	-	88	81.481	Pundamilia_nyererei
ENSSPAG00000002362	srsf6a	67	86.243	ENSRNOG00000006380	Srsf6	76	70.566	Rattus_norvegicus
ENSSPAG00000002362	srsf6a	67	84.127	ENSRBIG00000041414	SRSF6	98	60.432	Rhinopithecus_bieti
ENSSPAG00000002362	srsf6a	67	85.714	ENSRROG00000029989	SRSF6	98	61.871	Rhinopithecus_roxellana
ENSSPAG00000002362	srsf6a	67	85.714	ENSSBOG00000033708	-	98	61.871	Saimiri_boliviensis_boliviensis
ENSSPAG00000002362	srsf6a	50	71.739	ENSSBOG00000034078	-	96	51.097	Saimiri_boliviensis_boliviensis
ENSSPAG00000002362	srsf6a	67	86.772	ENSSHAG00000012805	SRSF6	77	70.412	Sarcophilus_harrisii
ENSSPAG00000002362	srsf6a	91	71.821	ENSSFOG00015015169	SRSF6	93	74.570	Scleropages_formosus
ENSSPAG00000002362	srsf6a	100	87.047	ENSSFOG00015019681	-	100	69.620	Scleropages_formosus
ENSSPAG00000002362	srsf6a	66	80.214	ENSSMAG00000017447	-	78	65.649	Scophthalmus_maximus
ENSSPAG00000002362	srsf6a	90	75.771	ENSSMAG00000014819	-	76	75.543	Scophthalmus_maximus
ENSSPAG00000002362	srsf6a	88	97.872	ENSSDUG00000016097	srsf6a	91	92.593	Seriola_dumerili
ENSSPAG00000002362	srsf6a	87	97.872	ENSSLDG00000022841	srsf6a	91	90.741	Seriola_lalandi_dorsalis
ENSSPAG00000002362	srsf6a	66	87.234	ENSSPUG00000004967	SRSF6	98	59.441	Sphenodon_punctatus
ENSSPAG00000002362	srsf6a	67	86.243	ENSSSCG00000007362	SRSF6	86	70.677	Sus_scrofa
ENSSPAG00000002362	srsf6a	66	87.234	ENSTGUG00000003455	SRSF6	76	70.149	Taeniopygia_guttata
ENSSPAG00000002362	srsf6a	93	74.926	ENSTNIG00000001692	srsf6a	84	94.595	Tetraodon_nigroviridis
ENSSPAG00000002362	srsf6a	55	78.205	ENSTBEG00000013448	SRSF6	73	63.090	Tupaia_belangeri
ENSSPAG00000002362	srsf6a	67	86.243	ENSUAMG00000003559	SRSF6	98	62.590	Ursus_americanus
ENSSPAG00000002362	srsf6a	86	76.923	ENSXMAG00000021849	srsf6a	93	68.889	Xiphophorus_maculatus