EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000002562 (Gene tree)
Gene ID: 103355535
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 7002 bases
Position: chrKK580228.1:213490-220491
Accession: 103355535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000003327	R3H	PF01424.22	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000003385	-	1002	XM_008279369	ENSSPAP00000003327	257 (aa)	XP_008277591	UPI000496C596

Gene Model

Click here to download ENSSPAG00000002562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000002562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000002562	r3hdm4	90	55.085	ENSG00000198858	R3HDM4	89	55.405	Homo_sapiens
ENSSPAG00000002562	r3hdm4	90	54.430	ENSAMEG00000003001	R3HDM4	96	54.430	Ailuropoda_melanoleuca
ENSSPAG00000002562	r3hdm4	99	81.641	ENSACIG00000004672	r3hdm4	99	81.641	Amphilophus_citrinellus
ENSSPAG00000002562	r3hdm4	98	83.399	ENSATEG00000015913	r3hdm4	99	83.399	Anabas_testudineus
ENSSPAG00000002562	r3hdm4	90	55.508	ENSANAG00000029748	R3HDM4	97	55.508	Aotus_nancymaae
ENSSPAG00000002562	r3hdm4	90	55.085	ENSBTAG00000046406	R3HDM4	87	55.085	Bos_taurus
ENSSPAG00000002562	r3hdm4	91	54.286	ENSCJAG00000020114	R3HDM4	91	54.286	Callithrix_jacchus
ENSSPAG00000002562	r3hdm4	90	54.008	ENSCAFG00000019665	R3HDM4	86	54.008	Canis_familiaris
ENSSPAG00000002562	r3hdm4	90	54.430	ENSCAFG00020016880	R3HDM4	86	54.430	Canis_lupus_dingo
ENSSPAG00000002562	r3hdm4	90	54.661	ENSCHIG00000020110	R3HDM4	90	54.661	Capra_hircus
ENSSPAG00000002562	r3hdm4	90	54.661	ENSCCAG00000019955	R3HDM4	85	54.661	Cebus_capucinus
ENSSPAG00000002562	r3hdm4	90	54.622	ENSCATG00000037269	R3HDM4	88	54.812	Cercocebus_atys
ENSSPAG00000002562	r3hdm4	90	53.390	ENSCLAG00000007094	R3HDM4	96	53.390	Chinchilla_lanigera
ENSSPAG00000002562	r3hdm4	90	54.430	ENSCSAG00000012574	R3HDM4	88	54.430	Chlorocebus_sabaeus
ENSSPAG00000002562	r3hdm4	99	58.491	ENSCPBG00000009805	R3HDM4	99	58.491	Chrysemys_picta_bellii
ENSSPAG00000002562	r3hdm4	90	54.430	ENSCANG00000040439	R3HDM4	82	54.430	Colobus_angolensis_palliatus
ENSSPAG00000002562	r3hdm4	90	54.237	ENSCGRG00001021650	R3hdm4	99	50.758	Cricetulus_griseus_chok1gshd
ENSSPAG00000002562	r3hdm4	90	54.237	ENSCGRG00000013169	R3hdm4	99	50.758	Cricetulus_griseus_crigri
ENSSPAG00000002562	r3hdm4	99	73.828	ENSCSEG00000018211	r3hdm4	99	73.828	Cynoglossus_semilaevis
ENSSPAG00000002562	r3hdm4	99	79.688	ENSCVAG00000017127	r3hdm4	99	79.688	Cyprinodon_variegatus
ENSSPAG00000002562	r3hdm4	90	53.165	ENSDORG00000006605	R3hdm4	96	53.165	Dipodomys_ordii
ENSSPAG00000002562	r3hdm4	90	54.237	ENSEASG00005021556	R3HDM4	85	54.237	Equus_asinus_asinus
ENSSPAG00000002562	r3hdm4	90	54.237	ENSECAG00000000003	R3HDM4	87	54.237	Equus_caballus
ENSSPAG00000002562	r3hdm4	90	54.430	ENSFCAG00000042437	R3HDM4	87	54.430	Felis_catus
ENSSPAG00000002562	r3hdm4	89	62.500	ENSFALG00000013938	R3HDM4	95	62.500	Ficedula_albicollis
ENSSPAG00000002562	r3hdm4	90	53.165	ENSFDAG00000017040	R3HDM4	96	53.165	Fukomys_damarensis
ENSSPAG00000002562	r3hdm4	99	80.078	ENSFHEG00000017636	r3hdm4	99	80.078	Fundulus_heteroclitus
ENSSPAG00000002562	r3hdm4	94	66.805	ENSGMOG00000001231	r3hdm4	99	66.805	Gadus_morhua
ENSSPAG00000002562	r3hdm4	90	61.017	ENSGALG00000001998	R3HDM4	89	61.017	Gallus_gallus
ENSSPAG00000002562	r3hdm4	99	81.641	ENSGAFG00000004173	r3hdm4	99	81.641	Gambusia_affinis
ENSSPAG00000002562	r3hdm4	99	58.113	ENSGAGG00000019698	R3HDM4	99	58.113	Gopherus_agassizii
ENSSPAG00000002562	r3hdm4	90	55.085	ENSGGOG00000008040	R3HDM4	96	55.085	Gorilla_gorilla
ENSSPAG00000002562	r3hdm4	99	83.984	ENSHBUG00000014810	r3hdm4	99	83.984	Haplochromis_burtoni
ENSSPAG00000002562	r3hdm4	90	52.542	ENSHGLG00000016194	R3HDM4	87	52.542	Heterocephalus_glaber_female
ENSSPAG00000002562	r3hdm4	100	75.969	ENSHCOG00000008422	r3hdm4	100	75.969	Hippocampus_comes
ENSSPAG00000002562	r3hdm4	99	70.312	ENSIPUG00000006716	r3hdm4	99	70.312	Ictalurus_punctatus
ENSSPAG00000002562	r3hdm4	90	51.477	ENSSTOG00000023015	R3HDM4	96	52.101	Ictidomys_tridecemlineatus
ENSSPAG00000002562	r3hdm4	90	52.966	ENSJJAG00000012475	R3hdm4	89	52.966	Jaculus_jaculus
ENSSPAG00000002562	r3hdm4	99	78.516	ENSKMAG00000005853	r3hdm4	99	78.516	Kryptolebias_marmoratus
ENSSPAG00000002562	r3hdm4	99	80.078	ENSLBEG00000000730	r3hdm4	99	80.078	Labrus_bergylta
ENSSPAG00000002562	r3hdm4	99	58.621	ENSLACG00000016445	R3HDM4	99	58.621	Latimeria_chalumnae
ENSSPAG00000002562	r3hdm4	99	68.846	ENSLOCG00000002423	r3hdm4	99	70.498	Lepisosteus_oculatus
ENSSPAG00000002562	r3hdm4	90	53.814	ENSLAFG00000017796	R3HDM4	91	53.814	Loxodonta_africana
ENSSPAG00000002562	r3hdm4	90	54.852	ENSMFAG00000044131	R3HDM4	88	54.852	Macaca_fascicularis
ENSSPAG00000002562	r3hdm4	85	55.157	ENSMMUG00000009682	R3HDM4	89	55.157	Macaca_mulatta
ENSSPAG00000002562	r3hdm4	90	54.852	ENSMNEG00000044115	R3HDM4	95	54.852	Macaca_nemestrina
ENSSPAG00000002562	r3hdm4	91	53.719	ENSMLEG00000035693	R3HDM4	89	53.909	Mandrillus_leucophaeus
ENSSPAG00000002562	r3hdm4	87	81.696	ENSMAMG00000005652	r3hdm4	91	81.696	Mastacembelus_armatus
ENSSPAG00000002562	r3hdm4	90	54.237	ENSMAUG00000010611	R3hdm4	91	54.237	Mesocricetus_auratus
ENSSPAG00000002562	r3hdm4	90	54.661	ENSMICG00000010124	R3HDM4	87	54.661	Microcebus_murinus
ENSSPAG00000002562	r3hdm4	90	53.419	ENSMOCG00000002646	R3hdm4	89	53.846	Microtus_ochrogaster
ENSSPAG00000002562	r3hdm4	99	76.953	ENSMMOG00000008253	r3hdm4	99	76.953	Mola_mola
ENSSPAG00000002562	r3hdm4	88	56.769	ENSMODG00000005698	R3HDM4	99	56.769	Monodelphis_domestica
ENSSPAG00000002562	r3hdm4	99	77.734	ENSMALG00000018856	r3hdm4	99	77.734	Monopterus_albus
ENSSPAG00000002562	r3hdm4	99	50.189	MGP_CAROLIEiJ_G0015551	R3hdm4	99	50.566	Mus_caroli
ENSSPAG00000002562	r3hdm4	99	50.575	ENSMUSG00000035781	R3hdm4	99	50.575	Mus_musculus
ENSSPAG00000002562	r3hdm4	90	52.321	MGP_PahariEiJ_G0030964	R3hdm4	89	52.743	Mus_pahari
ENSSPAG00000002562	r3hdm4	99	51.136	MGP_SPRETEiJ_G0016369	-	84	51.136	Mus_spretus
ENSSPAG00000002562	r3hdm4	92	55.187	ENSMPUG00000009394	R3HDM4	89	55.187	Mustela_putorius_furo
ENSSPAG00000002562	r3hdm4	99	83.203	ENSNBRG00000004438	r3hdm4	99	83.203	Neolamprologus_brichardi
ENSSPAG00000002562	r3hdm4	86	52.609	ENSNLEG00000001022	R3HDM4	99	52.609	Nomascus_leucogenys
ENSSPAG00000002562	r3hdm4	90	55.983	ENSMEUG00000011020	R3HDM4	98	55.983	Notamacropus_eugenii
ENSSPAG00000002562	r3hdm4	90	53.390	ENSODEG00000011745	R3HDM4	88	53.390	Octodon_degus
ENSSPAG00000002562	r3hdm4	99	83.203	ENSONIG00000012675	r3hdm4	92	83.203	Oreochromis_niloticus
ENSSPAG00000002562	r3hdm4	99	78.516	ENSOMEG00000003005	r3hdm4	99	78.516	Oryzias_melastigma
ENSSPAG00000002562	r3hdm4	90	54.661	ENSOGAG00000025656	R3HDM4	89	54.661	Otolemur_garnettii
ENSSPAG00000002562	r3hdm4	90	54.661	ENSOARG00000009945	R3HDM4	96	54.661	Ovis_aries
ENSSPAG00000002562	r3hdm4	90	55.085	ENSPPAG00000042371	R3HDM4	96	55.085	Pan_paniscus
ENSSPAG00000002562	r3hdm4	90	54.852	ENSPANG00000015203	R3HDM4	88	54.852	Papio_anubis
ENSSPAG00000002562	r3hdm4	99	65.900	ENSPKIG00000007421	r3hdm4	99	65.900	Paramormyrops_kingsleyae
ENSSPAG00000002562	r3hdm4	99	70.039	ENSPMGG00000020467	r3hdm4	99	70.039	Periophthalmus_magnuspinnatus
ENSSPAG00000002562	r3hdm4	90	54.894	ENSPEMG00000008365	Tmem259	97	54.894	Peromyscus_maniculatus_bairdii
ENSSPAG00000002562	r3hdm4	99	79.688	ENSPFOG00000003199	r3hdm4	99	79.688	Poecilia_formosa
ENSSPAG00000002562	r3hdm4	99	79.688	ENSPMEG00000014183	r3hdm4	99	79.688	Poecilia_mexicana
ENSSPAG00000002562	r3hdm4	99	79.688	ENSPREG00000010709	r3hdm4	99	79.688	Poecilia_reticulata
ENSSPAG00000002562	r3hdm4	90	55.319	ENSPPYG00000009297	R3HDM4	88	55.319	Pongo_abelii
ENSSPAG00000002562	r3hdm4	57	54.362	ENSPCAG00000010997	R3HDM4	55	54.362	Procavia_capensis
ENSSPAG00000002562	r3hdm4	90	55.085	ENSPCOG00000016785	R3HDM4	87	55.085	Propithecus_coquereli
ENSSPAG00000002562	r3hdm4	99	83.984	ENSPNYG00000017489	r3hdm4	99	83.984	Pundamilia_nyererei
ENSSPAG00000002562	r3hdm4	90	52.743	ENSRNOG00000011489	R3hdm4	89	53.165	Rattus_norvegicus
ENSSPAG00000002562	r3hdm4	90	54.430	ENSRROG00000028842	R3HDM4	88	54.430	Rhinopithecus_roxellana
ENSSPAG00000002562	r3hdm4	90	54.393	ENSSBOG00000019298	R3HDM4	70	54.812	Saimiri_boliviensis_boliviensis
ENSSPAG00000002562	r3hdm4	55	57.931	ENSSHAG00000003036	-	99	57.931	Sarcophilus_harrisii
ENSSPAG00000002562	r3hdm4	96	72.065	ENSSFOG00015020574	r3hdm4	92	71.713	Scleropages_formosus
ENSSPAG00000002562	r3hdm4	99	80.469	ENSSMAG00000021090	r3hdm4	74	80.469	Scophthalmus_maximus
ENSSPAG00000002562	r3hdm4	99	83.984	ENSSDUG00000008488	r3hdm4	99	83.984	Seriola_dumerili
ENSSPAG00000002562	r3hdm4	99	83.594	ENSSLDG00000025328	r3hdm4	99	83.594	Seriola_lalandi_dorsalis
ENSSPAG00000002562	r3hdm4	91	60.169	ENSSPUG00000005434	R3HDM4	92	60.169	Sphenodon_punctatus
ENSSPAG00000002562	r3hdm4	90	54.661	ENSSSCG00000013419	R3HDM4	86	54.661	Sus_scrofa
ENSSPAG00000002562	r3hdm4	78	54.369	ENSTGUG00000000663	R3HDM4	98	54.286	Taeniopygia_guttata
ENSSPAG00000002562	r3hdm4	90	56.223	ENSTTRG00000001470	R3HDM4	96	56.223	Tursiops_truncatus
ENSSPAG00000002562	r3hdm4	90	49.787	ENSUAMG00000005751	R3HDM4	99	54.709	Ursus_americanus
ENSSPAG00000002562	r3hdm4	90	54.008	ENSVVUG00000022685	R3HDM4	86	54.008	Vulpes_vulpes
ENSSPAG00000002562	r3hdm4	100	45.283	ENSXETG00000033624	R3HDM4	100	45.283	Xenopus_tropicalis
ENSSPAG00000002562	r3hdm4	99	79.377	ENSXCOG00000005127	r3hdm4	99	79.377	Xiphophorus_couchianus
ENSSPAG00000002562	r3hdm4	99	79.688	ENSXMAG00000022875	r3hdm4	99	79.688	Xiphophorus_maculatus